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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OAF is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
72.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
209.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
178.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
176.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
167.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
147.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
132.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
130.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
128.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
127.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
124.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
115.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
111.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
90.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
86.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
86.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
85.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
84.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
83.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
82.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
78.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
77.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
70.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
68.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
68.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
67.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
65.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
65.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
65.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
64.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
64.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
63.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
63.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
63.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
62.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
61.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
59.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
58.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
56.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
54.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
54.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
53.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
50.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
49.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
47.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
46.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
46.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
45.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
45.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
44.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
43.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
40.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
39.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
38.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
37.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
36.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
36.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
35.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
33.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
31.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
31.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
29.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
29.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OAF is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
235.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
215.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
195.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
149.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
139.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
137.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
129.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
129.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
125.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
124.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
116.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
116.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
111.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
111.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
111.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
105.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
104.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
102.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
100.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
98.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
96.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
93.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
90.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
87.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
86.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
83.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
83.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
83.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
81.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
81.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
80.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
79.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
79.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
78.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
78.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
77.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
75.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
73.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
73.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
73.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
73.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
73.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
72.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
72.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
72.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
72.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
72.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
72.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
71.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
71.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
71.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
70.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
70.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
70.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
69.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
69.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
69.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
69.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
69.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
67.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
67.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
67.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
67.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
66.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
66.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
65.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
65.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
64.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
64.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
64.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
64.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
64.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
63.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
63.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
63.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
63.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
63.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
63.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
63.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
62.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
62.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
62.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
61.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
61.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
61.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
61.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
61.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
60.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
60.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
60.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
60.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
60.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
59.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
59.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
59.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
59.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
59.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
59.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
58.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
58.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
57.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
57.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
57.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
57.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
57.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
57.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
56.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
56.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
56.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
56.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
56.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
56.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
56.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
56.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
56.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
56.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
55.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
55.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
55.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
55.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
55.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
55.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
55.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
55.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
55.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
55.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
54.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
54.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
54.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
54.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
54.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
54.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
54.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
54.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
54.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
53.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
53.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
53.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
53.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
53.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
53.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
52.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
52.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
52.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
52.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
52.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
52.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
52.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
52.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
52.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
52.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
52.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
52.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
52.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
52.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
52.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
51.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
51.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
51.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
51.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
51.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
51.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
51.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
51.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
51.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
51.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
51.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
51.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
50.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
50.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
50.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
50.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
50.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
50.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
50.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
50.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
50.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
50.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
50.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
50.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
50.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
50.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
50.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
50.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
50.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
49.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
49.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
49.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
49.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
49.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
49.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
49.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
49.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
48.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
48.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
48.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
48.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
48.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
48.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
48.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
48.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
48.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
48.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
48.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
48.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
47.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
47.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
47.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
47.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
47.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
47.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
47.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
47.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
47.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
47.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
47.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
46.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
46.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
46.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
46.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
46.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
46.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
46.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
46.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
46.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
46.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
46.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
46.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
46.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
46.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
46.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
46.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
45.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
45.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
45.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
45.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
45.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
45.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
45.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
45.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
45.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
45.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
45.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
45.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
45.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
44.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
44.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
44.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
44.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
44.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
44.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
44.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
44.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
44.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
44.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
43.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
43.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
43.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
43.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
43.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
43.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
43.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
43.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
43.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
43.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
43.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
43.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
43.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
42.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
42.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
42.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
42.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
42.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
42.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
42.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
42.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
42.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
42.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
42.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
41.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
41.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
41.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
41.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
41.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
41.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
41.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
41.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
41.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
41.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
41.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
41.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
41.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
41.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
41.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
41.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
41.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
41.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
41.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
40.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
40.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
40.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
40.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
40.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
40.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
40.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
40.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
40.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
40.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
40.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
40.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
39.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
39.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
39.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
39.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
39.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
39.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
39.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
39.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
39.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
39.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
39.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
39.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
39.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
39.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
39.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
39.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
38.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
38.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
38.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
38.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
38.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
38.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
38.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
38.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
38.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
38.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
37.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
37.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
37.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
37.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
37.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
37.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
37.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
37.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
37.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
37.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
37.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
37.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
36.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
36.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
36.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
36.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
36.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
36.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
36.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
36.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
36.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
36.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
36.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
36.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
35.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
35.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
35.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
35.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
35.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
35.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
35.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
35.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
35.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
35.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
35.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
35.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
35.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
35.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
35.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
35.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
35.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
34.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
34.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
34.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
34.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
34.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
34.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
34.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
34.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
34.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
34.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
34.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
33.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
33.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
33.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
33.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
33.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
33.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
33.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
33.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
33.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
33.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
33.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
33.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
33.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
32.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
32.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
32.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
32.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
32.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
32.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
32.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
32.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
31.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
31.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
31.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
31.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
30.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
30.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
30.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
30.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
30.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
30.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
30.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
30.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
30.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
30.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
30.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
29.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
29.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
29.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
29.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
29.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
29.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
29.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
29.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
29.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
29.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
29.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
29.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
28.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
28.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
28.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
28.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
28.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
28.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
27.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
27.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
27.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
27.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
27.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
27.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
27.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
27.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
26.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
26.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
26.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
26.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
26.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
26.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
26.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
26.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
26.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
26.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
25.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
25.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
25.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
25.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
25.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
25.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
24.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
24.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
24.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
24.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
24.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
24.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
24.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
24.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
23.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
23.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
23.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
23.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
23.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
23.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
22.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
22.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
22.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
22.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
22.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
22.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
21.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
20.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
20.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
19.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
19.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
19.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
18.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
18.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
18.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
17.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
15.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
15.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
14.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
12.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
10.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
9.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
8.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
8.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OAF is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
56.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
127.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
118.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
114.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
112.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
100.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
100.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
88.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
87.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
85.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
84.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
83.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
82.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
76.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
76.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
76.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
75.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
75.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
75.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
75.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
74.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
74.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
74.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
74.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
72.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
72.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
70.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
67.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
66.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
66.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
64.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
63.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
63.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
63.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
62.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
62.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
62.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
61.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
61.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
60.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
60.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
59.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
59.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
59.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
58.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
58.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
58.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
57.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
57.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
56.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
55.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
55.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
54.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
54.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
54.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
53.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
53.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
52.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
52.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
52.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
52.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
51.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
50.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
49.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
49.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
49.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
49.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
49.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
48.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
47.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
45.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
44.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
44.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
42.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
42.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
42.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
41.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
39.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
38.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
35.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
32.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
30.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
29.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
28.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
28.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
28.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
27.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
27.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
26.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
25.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
23.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
21.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
21.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
19.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
OAF is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
103.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
366.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
285.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
275.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
256.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
250.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
245.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
239.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
239.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
229.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
227.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
227.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
213.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
212.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
211.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
211.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
209.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
206.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
203.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
202.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
200.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
200.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
199.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
198.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
197.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
196.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
195.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
195.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
186.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
186.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
186.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
185.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
181.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
181.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
176.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
175.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
175.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
174.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
172.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
172.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
171.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
170.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
170.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
170.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
167.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
161.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
160.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
160.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
159.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
157.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
157.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
156.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
156.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
155.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
154.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
152.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
152.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
151.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
151.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
149.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
149.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
148.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
148.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
147.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
147.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
146.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
141.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
141.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
138.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
138.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
138.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
136.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
135.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
135.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
135.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
134.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
130.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
130.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
130.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
129.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
129.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
127.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
127.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
127.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
126.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
124.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
124.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
123.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
122.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
121.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
120.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
120.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
119.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
118.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
118.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
117.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
116.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
116.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
115.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
115.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
114.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
113.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
113.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
112.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
111.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
111.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
111.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
110.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
109.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
109.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
109.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
108.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
107.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
107.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
107.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
107.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
106.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
105.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
105.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
103.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
103.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
103.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
100.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
99.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
99.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
97.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
97.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
97.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
97.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
96.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
95.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
95.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
94.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
93.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
93.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
92.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
92.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
91.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
91.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
91.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
91.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
89.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
89.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
89.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
88.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
88.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
88.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
88.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
87.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
87.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
87.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
87.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
87.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
87.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
84.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
84.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
84.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
83.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
83.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
82.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
82.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
80.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
79.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
78.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
77.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
77.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
77.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
76.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
75.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
75.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
75.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
75.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
75.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
74.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
74.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
73.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
73.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
73.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
72.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
72.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
72.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
71.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
71.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
71.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
71.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
70.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
70.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
70.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
70.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
70.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
69.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
69.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
69.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
69.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
69.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
67.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
67.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
66.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
65.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
65.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
65.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
64.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
64.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
63.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
63.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
63.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
63.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
62.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
62.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
61.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
61.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
60.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
60.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
60.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
59.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
59.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
59.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
59.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
59.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
57.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
57.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
56.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
55.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
55.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
55.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
54.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
53.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
53.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
52.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
51.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
50.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
50.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
50.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
50.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
49.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
49.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
48.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
48.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
47.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
47.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
47.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
47.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
47.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
46.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
46.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
46.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
46.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
44.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
43.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
43.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
43.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
42.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
42.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
42.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
40.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
40.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
40.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
39.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
39.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
38.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
38.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
37.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
36.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
36.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
36.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
35.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
33.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
33.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
32.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
30.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
30.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
28.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
28.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
28.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
25.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
22.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
21.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
21.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
20.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
20.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.9
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
2.7
CPT0084560003
Tumor
2.6
CPT0026420001
Normal
1.4
CPT0063630003
Tumor
1.3
CPT0013790003
Normal
1.3
CPT0015910003
Tumor
1.1
CPT0063320003
Tumor
1.1
CPT0081990003
Tumor
1.0
CPT0011410003
Tumor
0.9
CPT0010120001
Normal
0.8
CPT0063330001
Normal
0.8
CPT0069190001
Normal
0.7
CPT0012920003
Normal
0.7
CPT0007860003
Tumor
0.6
CPT0077140001
Normal
0.6
CPT0012290003
Normal
0.6
CPT0092290003
Tumor
0.6
CPT0014160003
Tumor
0.5
CPT0069160003
Tumor
0.5
CPT0012090003
Normal
0.5
CPT0012570003
Normal
0.5
CPT0000790001
Normal
0.5
CPT0078510003
Tumor
0.5
CPT0078840001
Normal
0.4
CPT0086970003
Normal
0.4
CPT0079300001
Normal
0.4
CPT0081620001
Normal
0.4
CPT0065930003
Tumor
0.4
CPT0079510001
Normal
0.4
CPT0076350001
Normal
0.4
CPT0069010001
Normal
0.4
CPT0024680001
Normal
0.4
CPT0088920001
Normal
0.4
CPT0020130001
Normal
0.4
CPT0023360001
Normal
0.4
CPT0000660001
Normal
0.4
CPT0009020003
Normal
0.4
CPT0078530001
Normal
0.3
CPT0092740003
Normal
0.3
CPT0014470001
Normal
0.3
CPT0002370001
Normal
0.3
CPT0000890001
Normal
0.3
CPT0077310003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0006950001
Normal
0.3
CPT0078940001
Normal
0.3
CPT0019990003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0023710001
Normal
0.2
CPT0017410003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0011240003
Tumor
0.2
CPT0007470001
Normal
0.2
CPT0066480003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0081880003
Tumor
0.2
CPT0086370003
Normal
0.1
CPT0012770003
Normal
0.1
CPT0075170001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0014350001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0064370003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0018250001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0001550001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0084590001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0001340003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0064400001
Normal
-0.2
CPT0092730003
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0089480003
Normal
-0.2
CPT0017850003
Tumor
-0.2
CPT0079230003
Tumor
-0.2
CPT0001510001
Normal
-0.2
CPT0089020003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0012900004
Tumor
-0.2
CPT0088570001
Normal
-0.3
CPT0001220008
Tumor
-0.3
CPT0009080003
Normal
-0.3
CPT0065750003
Tumor
-0.3
CPT0014130001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0088760003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0025290003
Tumor
-0.4
CPT0079180003
Tumor
-0.4
CPT0021240003
Tumor
-0.4
CPT0078660003
Tumor
-0.4
CPT0086360003
Tumor
-0.4
CPT0086030003
Tumor
-0.4
CPT0001180009
Tumor
-0.4
CPT0092160003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0092310003
Normal
-0.4
CPT0012180003
Tumor
-0.4
CPT0000870016
Tumor
-0.4
CPT0019130003
Tumor
-0.4
CPT0075560003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0088480003
Tumor
-0.4
CPT0014370004
Tumor
-0.5
CPT0077110003
Tumor
-0.5
CPT0007320003
Tumor
-0.5
CPT0066470004
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0088630003
Tumor
-0.6
CPT0023690003
Tumor
-0.6
CPT0089460004
Tumor
-0.6
CPT0012370003
Tumor
-0.6
CPT0071150004
Tumor
-0.6
CPT0009000003
Tumor
-0.6
CPT0086820003
Tumor
-0.6
CPT0025580004
Tumor
-0.6
CPT0012080003
Tumor
-0.6
CPT0079270003
Tumor
-0.6
CPT0079410003
Tumor
-0.6
CPT0079480003
Tumor
-0.7
CPT0010160003
Tumor
-0.7
CPT0081600003
Tumor
-0.7
CPT0088690003
Tumor
-0.7
CPT0025050003
Tumor
-0.7
CPT0012280003
Tumor
-0.7
CPT0025880003
Tumor
-0.8
CPT0024670003
Tumor
-0.8
CPT0086950003
Tumor
-0.9
CPT0009060003
Tumor
-0.9
CPT0015810003
Tumor
-0.9
CPT0088970003
Tumor
-0.9
CPT0006440003
Tumor
-0.9
CPT0079380003
Tumor
-0.9
CPT0010110003
Tumor
-0.9
CPT0025230003
Tumor
-1.0
CPT0065430003
Tumor
-1.0
CPT0088550004
Tumor
-1.0
CPT0077490003
Tumor
-1.0
CPT0001540009
Tumor
-1.1
CPT0078830003
Tumor
-1.1
CPT0012670003
Tumor
-1.1
CPT0014450004
Tumor
-1.1
CPT0015730003
Tumor
-1.2
CPT0086870003
Tumor
-1.2
CPT0078990003
Tumor
-1.4
CPT0026410003
Tumor
-1.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
