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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RIPK4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
26.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
15.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
14.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
12.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
12.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
11.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
11.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
10.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
9.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
9.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
8.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
8.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
8.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
7.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
7.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
6.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
6.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
5.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
5.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
5.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
5.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
4.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
4.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
4.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
4.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
4.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
3.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
2.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
1.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RIPK4 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
77.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
66.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
48.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
47.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
46.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
46.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
43.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
41.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
40.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
40.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
39.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
38.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
38.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
37.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
36.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
36.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
35.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
35.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
35.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
35.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
35.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
34.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
33.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
33.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
33.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
33.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
33.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
32.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
32.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
31.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
31.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
30.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
30.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
30.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
30.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
29.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
29.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
29.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
29.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
28.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
28.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
28.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
27.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
27.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
27.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
27.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
27.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
27.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
27.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
27.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
26.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
26.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
26.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
26.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
26.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
25.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
25.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
25.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
25.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
25.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
25.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
24.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
24.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
24.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
24.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
24.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
24.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
24.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
24.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
23.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
23.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
23.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
23.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
23.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
23.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
23.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
23.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
23.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
23.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
22.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
22.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
22.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
22.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
22.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
22.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
22.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
22.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
22.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
22.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
22.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
22.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
21.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
21.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
21.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
21.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
21.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
21.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
21.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
21.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
21.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
21.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
21.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
21.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
20.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
20.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
20.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
20.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
20.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
20.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
20.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
20.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
20.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
20.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
20.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
20.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
19.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
19.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
19.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
19.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
19.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
19.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
19.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
19.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
19.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
19.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
18.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
18.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
18.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
18.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
18.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
18.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
18.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
18.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
18.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
17.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
17.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
17.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
17.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
17.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
17.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
17.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
17.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
17.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
17.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
17.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
17.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
17.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
17.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
17.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
17.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
17.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
17.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
16.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
16.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
16.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
16.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
16.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
16.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
16.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
16.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
16.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
16.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
16.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
16.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
15.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
15.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
15.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
15.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
15.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
15.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
15.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
15.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
15.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
15.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
15.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
15.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
15.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
14.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
14.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
14.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
14.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
14.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
14.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
14.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
14.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
14.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
14.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
14.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
14.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
13.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
13.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
13.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
13.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
13.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
13.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
13.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
13.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
13.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
13.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
12.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
12.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
12.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
12.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
12.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
12.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
12.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
12.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
12.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
12.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
12.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
12.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
12.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
11.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
11.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
11.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
11.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
11.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
11.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
11.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
11.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
11.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
11.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
11.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
11.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
10.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
10.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
10.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
10.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
10.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
10.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
10.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
10.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
10.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
10.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
9.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
9.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
9.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
9.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
9.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
9.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
9.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
9.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
9.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
8.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
8.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
8.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
8.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
8.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
8.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
8.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
8.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
8.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
7.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
7.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
7.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
7.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
7.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
7.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
7.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
7.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
7.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
7.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
7.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
7.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
6.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
6.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
6.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
6.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
5.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
5.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
5.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
5.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
5.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
5.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
5.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
5.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
5.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
4.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
4.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
4.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
4.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
4.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
4.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
4.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
4.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
4.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
4.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
3.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
3.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
3.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
3.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
3.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
3.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
3.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
3.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
3.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
2.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
2.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
2.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
2.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
2.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
2.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
2.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
2.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
2.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
2.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
2.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
2.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RIPK4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
55.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
44.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
38.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
32.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
31.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
29.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
29.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
28.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
26.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
26.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
26.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
26.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
26.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
26.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
25.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
24.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
23.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
23.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
23.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
22.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
22.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
22.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
21.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
21.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
20.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
20.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
20.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
20.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
20.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
20.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
19.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
19.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
19.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
19.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
18.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
18.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
17.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
16.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
15.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
15.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
14.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
13.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
13.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
12.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
11.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
11.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
11.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
11.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
10.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
10.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
10.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
9.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
9.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
9.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
9.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
8.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
8.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
7.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
7.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
7.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
7.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
7.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
6.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
6.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
6.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
6.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
3.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
3.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RIPK4 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
76.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
57.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
51.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
48.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
47.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
45.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
43.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
43.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
42.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
40.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
38.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
38.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
38.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
37.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
37.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
36.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
36.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
36.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
35.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
35.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
35.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
35.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
33.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
32.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
32.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
32.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
32.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
31.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
31.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
30.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
30.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
29.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
29.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
29.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
28.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
28.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
28.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
28.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
26.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
26.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
26.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
26.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
26.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
26.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
26.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
25.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
25.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
25.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
25.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
24.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
24.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
24.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
23.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
23.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
23.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
23.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
23.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
23.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
23.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
22.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
22.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
21.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
21.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
20.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
20.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
20.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
20.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
20.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
20.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
20.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
20.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
20.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
19.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
19.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
19.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
19.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
19.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
18.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
18.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
18.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
18.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
18.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
18.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
17.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
17.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
17.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
17.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
17.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
17.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
17.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
17.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
17.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
17.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
16.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
16.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
16.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
16.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
15.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
15.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
15.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
15.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
15.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
15.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
14.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
14.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
14.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
14.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
14.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
14.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
13.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
13.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
13.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
12.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
12.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
12.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
12.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
12.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
12.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
12.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
12.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
12.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
11.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
11.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
11.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
11.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
11.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
11.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
11.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
11.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
11.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
10.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
10.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
10.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
10.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
10.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
10.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
10.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
9.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
9.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
9.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
9.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
9.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
9.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
9.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
9.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
9.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
8.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
8.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
8.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
8.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
8.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
8.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
8.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
8.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
8.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
8.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
8.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
7.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
7.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
7.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
7.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
7.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
7.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
7.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
7.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
6.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
6.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
6.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
6.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
6.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
5.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
4.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
4.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
3.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
3.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
3.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
3.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
3.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
2.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
2.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
2.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
1.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
1.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001350001
Normal
0.7
CPT0000790001
Normal
0.7
CPT0086950003
Tumor
0.7
CPT0088780001
Normal
0.6
CPT0006950001
Normal
0.6
CPT0092740003
Normal
0.6
CPT0011410003
Tumor
0.6
CPT0063640001
Normal
0.6
CPT0079430001
Normal
0.6
CPT0089480003
Normal
0.6
CPT0007470001
Normal
0.5
CPT0078840001
Normal
0.5
CPT0020130001
Normal
0.5
CPT0089040001
Normal
0.5
CPT0023710001
Normal
0.5
CPT0007870001
Normal
0.5
CPT0009080003
Normal
0.5
CPT0088710001
Normal
0.5
CPT0092310003
Normal
0.5
CPT0001180009
Tumor
0.5
CPT0000640003
Tumor
0.4
CPT0086830003
Normal
0.4
CPT0007320003
Tumor
0.4
CPT0025920001
Normal
0.4
CPT0014350001
Normal
0.4
CPT0077110003
Tumor
0.4
CPT0025060001
Normal
0.4
CPT0066430001
Normal
0.4
CPT0006730001
Normal
0.4
CPT0014130001
Normal
0.4
CPT0079000001
Normal
0.4
CPT0076350001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0086970003
Normal
0.3
CPT0002270011
Tumor
0.3
CPT0001550001
Normal
0.3
CPT0013790003
Normal
0.3
CPT0088970003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0065450001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0066520001
Normal
0.3
CPT0014450004
Tumor
0.3
CPT0077500001
Normal
0.3
CPT0077140001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0001230001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0087050003
Normal
0.3
CPT0012770003
Normal
0.3
CPT0024670003
Tumor
0.2
CPT0000890001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0026420001
Normal
0.2
CPT0086820003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0000870016
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0020120003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0020020001
Normal
0.2
CPT0092290003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0075170001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0012550003
Tumor
0.2
CPT0081620001
Normal
0.2
CPT0086870003
Tumor
0.2
CPT0019160001
Normal
0.2
CPT0025880003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0063330001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0012920003
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0006530001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0001270001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0011240003
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0071150004
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0012180003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0006630003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0088550004
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0088480003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0066470004
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0025170003
Tumor
-0.4
CPT0089020003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0081880003
Tumor
-0.4
CPT0010120001
Normal
-0.5
CPT0065930003
Tumor
-0.5
CPT0078660003
Tumor
-0.5
CPT0092730003
Tumor
-0.5
CPT0017410003
Tumor
-0.5
CPT0025290003
Tumor
-0.5
CPT0066480003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0012670003
Tumor
-0.5
CPT0079380003
Tumor
-0.5
CPT0084560003
Tumor
-0.5
CPT0001340003
Tumor
-0.5
CPT0082010001
Normal
-0.6
CPT0025580004
Tumor
-0.6
CPT0079230003
Tumor
-0.6
CPT0069190001
Normal
-0.6
CPT0015910003
Tumor
-0.7
CPT0069160003
Tumor
-0.7
CPT0069010001
Normal
-0.7
CPT0065690003
Tumor
-0.8
CPT0069000003
Tumor
-0.9
CPT0081990003
Tumor
-1.0
CPT0006900003
Tumor
-1.1
CPT0079180003
Tumor
-1.3
CPT0078510003
Tumor
-1.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.