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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDX41 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
80.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
69.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
64.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
55.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
53.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
44.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
42.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
41.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
41.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
39.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
39.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
36.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
36.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
35.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
34.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
34.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
33.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
33.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
32.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
32.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
31.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
30.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
29.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
28.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
28.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
27.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
27.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
27.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
26.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
25.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
25.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
24.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
24.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
24.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
24.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
24.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
23.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
23.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
23.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
21.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
21.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
20.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
20.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
19.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
18.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
18.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
15.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
15.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
15.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
13.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
13.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
13.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
12.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
12.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
5.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
3.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
2.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDX41 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
116.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
108.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
98.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
95.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
92.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
89.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
88.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
88.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
88.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
87.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
84.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
83.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
80.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
80.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
79.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
79.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
79.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
79.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
79.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
78.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
78.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
76.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
76.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
76.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
76.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
75.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
75.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
74.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
74.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
74.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
74.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
73.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
73.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
73.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
72.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
72.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
72.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
71.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
71.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
71.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
70.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
70.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
70.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
69.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
69.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
68.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
68.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
68.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
68.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
68.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
67.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
67.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
67.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
66.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
66.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
66.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
66.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
66.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
66.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
65.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
64.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
63.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
63.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
62.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
62.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
62.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
62.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
62.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
61.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
61.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
61.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
61.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
61.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
61.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
61.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
60.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
60.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
60.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
60.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
60.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
59.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
59.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
59.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
58.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
58.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
58.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
58.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
58.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
58.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
58.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
58.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
58.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
57.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
57.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
57.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
57.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
57.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
57.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
57.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
57.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
57.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
57.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
56.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
56.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
56.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
56.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
56.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
56.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
56.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
56.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
56.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
55.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
55.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
55.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
55.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
55.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
55.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
54.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
54.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
54.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
54.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
54.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
54.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
54.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
54.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
53.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
53.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
53.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
53.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
53.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
53.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
53.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
53.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
52.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
52.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
52.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
52.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
52.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
52.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
52.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
52.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
52.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
52.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
52.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
51.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
51.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
51.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
51.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
51.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
51.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
51.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
51.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
51.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
51.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
51.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
50.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
50.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
50.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
50.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
50.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
50.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
50.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
50.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
50.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
50.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
50.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
50.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
50.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
50.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
50.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
50.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
50.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
50.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
50.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
49.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
49.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
49.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
49.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
49.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
49.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
49.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
49.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
49.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
49.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
49.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
49.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
49.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
49.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
48.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
48.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
48.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
48.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
48.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
48.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
48.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
48.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
48.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
48.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
48.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
48.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
48.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
47.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
47.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
47.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
47.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
47.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
47.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
47.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
47.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
47.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
47.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
47.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
47.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
47.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
46.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
46.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
46.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
46.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
46.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
46.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
46.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
45.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
45.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
45.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
45.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
45.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
45.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
45.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
45.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
45.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
45.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
45.3
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
45.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
45.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
45.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
45.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
45.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
45.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
45.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
45.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
45.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
45.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
44.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
44.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
44.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
44.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
44.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
44.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
44.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
44.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
44.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
44.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
44.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
44.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
44.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
44.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
43.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
43.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
43.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
43.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
43.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
43.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
43.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
43.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
43.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
43.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
43.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
43.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
42.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
42.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
42.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
42.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
42.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
42.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
42.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
42.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
42.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
42.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
41.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
41.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
41.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
41.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
41.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
41.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
41.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
41.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
41.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
41.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
41.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
41.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
40.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
40.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
40.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
40.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
40.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
40.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
40.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
40.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
40.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
40.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
39.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
39.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
39.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
39.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
39.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
39.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
39.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
39.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
39.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
38.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
38.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
38.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
38.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
38.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
38.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
38.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
38.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
38.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
37.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
37.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
37.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
37.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
37.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
37.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
37.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
37.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
37.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
37.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
36.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
36.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
36.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
36.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
36.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
36.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
35.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
35.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
35.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
35.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
35.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
35.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
34.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
34.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
34.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
34.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
34.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
34.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
34.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
34.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
33.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
33.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
33.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
33.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
33.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
33.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
33.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
33.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
33.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
33.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
32.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
32.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
32.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
32.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
32.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
32.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
32.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
32.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
32.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
31.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
31.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
31.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
31.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
31.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
31.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
31.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
31.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
31.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
31.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
31.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
31.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
31.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
30.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
30.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
30.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
30.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
30.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
30.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
29.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
29.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
29.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
29.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
29.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
29.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
29.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
29.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
28.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
28.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
28.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
28.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
27.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
27.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
27.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
27.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
27.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
26.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
26.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
26.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
26.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
26.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
26.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
25.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
25.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
25.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
25.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
25.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
25.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
25.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
25.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
24.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
24.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
24.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
24.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
23.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
23.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
23.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
23.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
23.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
23.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
23.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
23.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
23.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
23.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
22.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
22.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
22.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
22.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
22.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
22.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
22.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
21.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
21.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
21.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
21.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
21.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
21.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
21.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
20.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
20.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
20.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
20.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
20.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
20.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
19.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
19.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
19.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
19.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
18.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
18.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
18.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
18.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
18.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
17.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
17.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
17.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
16.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
16.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
16.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
15.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
13.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
13.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
13.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
11.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
11.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
10.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
7.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
6.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
6.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
6.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDX41 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
105.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
91.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
88.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
84.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
82.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
78.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
78.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
77.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
76.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
76.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
74.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
70.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
70.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
69.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
69.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
69.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
68.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
68.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
66.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
64.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
63.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
63.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
62.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
61.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
60.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
60.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
59.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
59.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
58.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
58.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
58.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
58.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
57.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
56.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
56.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
56.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
56.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
55.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
55.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
55.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
54.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
53.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
53.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
53.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
52.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
52.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
50.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
50.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
50.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
49.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
49.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
49.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
48.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
48.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
48.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
47.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
47.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
47.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
47.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
46.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
46.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
45.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
43.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
42.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
42.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
42.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
42.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
42.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
41.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
41.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
41.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
40.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
40.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
40.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
40.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
39.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
39.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
39.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
38.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
38.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
37.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
37.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
36.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
36.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
36.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
33.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
33.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
32.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
32.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
30.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
30.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
27.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
25.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
24.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
22.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
20.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DDX41 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
145.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
144.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
122.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
112.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
109.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
104.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
104.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
97.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
96.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
94.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
91.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
88.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
84.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
82.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
81.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
81.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
80.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
79.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
78.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
77.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
76.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
75.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
73.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
72.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
71.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
71.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
70.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
70.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
70.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
68.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
67.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
66.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
66.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
66.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
65.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
65.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
64.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
63.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
62.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
62.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
61.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
60.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
60.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
60.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
60.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
59.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
58.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
58.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
58.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
57.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
57.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
57.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
56.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
55.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
55.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
54.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
54.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
54.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
54.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
53.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
53.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
53.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
53.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
53.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
52.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
52.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
51.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
51.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
51.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
51.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
50.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
50.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
49.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
49.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
49.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
49.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
49.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
49.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
48.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
48.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
48.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
48.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
48.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
48.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
47.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
47.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
47.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
47.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
47.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
47.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
46.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
46.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
46.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
45.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
45.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
44.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
44.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
44.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
43.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
43.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
43.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
43.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
43.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
42.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
42.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
42.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
42.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
42.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
42.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
42.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
41.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
41.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
41.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
40.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
40.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
40.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
40.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
39.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
39.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
39.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
39.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
38.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
38.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
38.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
37.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
37.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
37.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
37.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
37.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
37.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
37.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
37.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
36.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
36.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
36.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
36.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
36.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
35.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
35.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
35.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
35.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
35.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
35.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
35.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
34.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
34.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
34.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
34.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
34.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
34.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
34.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
33.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
33.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
32.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
32.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
32.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
32.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
32.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
32.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
32.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
32.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
31.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
31.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
31.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
31.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
30.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
30.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
30.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
29.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
29.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
29.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
29.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
29.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
29.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
28.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
28.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
28.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
28.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
28.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
27.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
27.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
26.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
26.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
26.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
26.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
25.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
25.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
25.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
25.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
25.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
24.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
24.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
24.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
23.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
23.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
23.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
23.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
23.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
23.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
23.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
23.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
23.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
22.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
21.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
21.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
21.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
21.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
21.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
19.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
19.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
18.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
18.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
18.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
17.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
17.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
17.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
17.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
17.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
15.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
15.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
15.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
14.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
12.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
11.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
10.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
7.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
6.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
5.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
5.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
4.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
4.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
4.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
3.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
2.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
2.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.8
CPT0086950003
Tumor
0.8
CPT0024670003
Tumor
0.6
CPT0021240003
Tumor
0.6
CPT0001260009
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0012180003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0001180009
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0081880003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0006440003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0088760003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0092190003
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0078660003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0065750003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0087050003
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0011410003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0020020001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0023710001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0001500009
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0011240003
Tumor
-0.3
CPT0075570001
Normal
-0.3
CPT0088500001
Normal
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.