We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPC6 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
47.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
38.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
37.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
29.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
29.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
29.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
19.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
15.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
15.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
13.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
9.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
8.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
8.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
6.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
5.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
5.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
5.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
3.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
3.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
3.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
3.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
2.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
2.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
2.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
1.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
1.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
1.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
1.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPC6 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
105.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
65.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
53.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
51.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
43.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
43.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
42.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
41.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
40.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
40.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
38.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
38.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
37.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
37.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
36.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
35.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
35.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
33.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
33.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
33.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
33.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
32.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
32.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
32.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
32.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
32.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
31.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
31.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
31.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
30.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
30.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
30.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
29.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
29.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
29.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
29.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
29.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
28.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
28.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
28.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
27.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
27.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
27.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
27.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
27.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
27.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
26.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
26.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
26.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
26.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
26.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
25.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
25.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
25.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
25.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
25.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
24.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
24.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
24.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
24.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
24.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
23.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
23.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
23.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
23.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
23.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
23.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
23.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
23.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
23.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
23.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
23.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
23.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
23.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
22.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
22.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
22.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
22.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
22.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
22.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
22.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
22.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
22.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
22.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
22.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
22.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
21.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
21.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
21.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
21.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
21.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
20.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
20.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
20.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
20.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
20.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
20.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
20.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
20.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
19.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
19.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
19.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
19.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
19.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
19.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
18.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
18.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
18.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
18.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
18.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
18.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
18.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
18.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
18.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
18.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
18.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
18.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
17.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
17.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
17.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
17.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
17.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
17.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
17.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
17.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
16.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
16.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
16.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
16.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
16.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
16.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
16.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
16.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
16.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
16.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
16.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
15.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
15.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
15.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
15.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
15.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
15.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
15.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
15.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
15.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
15.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
14.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
14.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
14.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
14.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
14.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
14.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
14.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
14.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
14.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
14.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
14.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
14.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
13.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
13.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
13.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
13.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
13.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
13.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
13.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
13.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
12.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
12.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
12.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
12.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
12.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
12.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
12.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
11.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
11.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
11.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
11.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
11.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
11.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
11.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
11.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
10.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
10.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
10.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
10.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
10.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
10.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
10.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
10.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
10.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
10.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
10.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
10.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
10.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
9.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
9.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
9.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
9.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
9.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
9.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
9.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
9.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
9.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
9.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
9.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
9.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
9.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
8.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
8.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
8.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
8.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
8.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
8.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
8.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
8.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
8.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
8.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
8.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
8.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
8.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
8.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
8.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
8.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
8.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
8.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
7.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
7.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
7.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
7.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
7.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
7.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
7.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
7.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
7.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
7.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
7.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
7.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
6.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
6.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
6.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
6.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
6.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
6.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
6.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
6.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
6.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
6.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
6.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
5.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
5.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
5.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
5.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
5.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
5.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
5.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
5.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
5.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
5.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
5.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
5.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
5.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
4.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
4.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
4.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
4.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
4.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
4.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
4.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
4.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
4.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
4.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
4.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
4.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
4.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
4.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
4.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
4.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
4.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
4.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
4.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
4.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
4.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
4.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
4.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
3.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
3.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
3.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
3.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
3.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
3.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
3.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
3.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
3.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
3.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
3.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
3.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
3.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
3.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
3.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
3.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
3.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
3.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
2.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
2.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
2.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
2.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
2.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
2.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
2.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
2.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
2.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
2.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
2.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
2.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
2.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
2.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
2.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
2.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
2.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
2.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
2.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
2.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
2.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
2.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
2.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
2.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
2.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
2.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
2.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
1.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
1.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
1.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
1.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
1.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
1.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
1.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
1.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
1.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
1.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
1.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
1.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
1.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
1.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
1.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
1.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
0.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
0.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
0.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
0.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
0.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
0.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
0.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
0.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
0.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
0.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
0.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
0.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
0.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPC6 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
57.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
35.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
34.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
30.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
28.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
28.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
28.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
28.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
27.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
27.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
24.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
24.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
23.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
23.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
23.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
21.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
21.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
20.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
20.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
20.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
19.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
19.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
19.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
18.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
18.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
16.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
15.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
15.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
15.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
15.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
15.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
13.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
13.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
13.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
13.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
12.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
12.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
12.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
11.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
11.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
11.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
11.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
10.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
10.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
9.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
9.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
9.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
9.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
9.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
8.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
8.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
8.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
8.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
8.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
8.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
8.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
7.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
7.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
7.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
6.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
6.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
6.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
5.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
4.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
4.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
4.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
2.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
2.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
2.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
1.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
0.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
0.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
0.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
0.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
0.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GPC6 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
88.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
83.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
74.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
61.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
54.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
48.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
43.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
43.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
42.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
41.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
40.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
38.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
36.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
35.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
35.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
34.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
32.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
31.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
30.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
29.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
29.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
28.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
27.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
26.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
26.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
23.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
22.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
22.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
21.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
21.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
21.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
19.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
18.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
18.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
17.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
17.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
17.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
16.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
15.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
15.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
15.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
15.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
15.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
14.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
13.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
13.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
13.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
13.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
13.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
13.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
13.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
13.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
12.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
12.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
12.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
12.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
11.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
11.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
11.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
11.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
11.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
11.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
10.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
10.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
10.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
10.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
10.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
10.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
10.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
10.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
9.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
9.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
9.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
9.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
9.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
9.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
9.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
9.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
8.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
8.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
8.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
8.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
8.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
8.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
8.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
8.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
8.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
7.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
7.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
7.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
7.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
7.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
7.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
7.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
7.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
6.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
6.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
6.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
6.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
6.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
6.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
6.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
6.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
6.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
6.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
6.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
6.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
6.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
5.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
5.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
5.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
5.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
5.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
5.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
5.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
5.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
5.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
5.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
5.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
5.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
5.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
5.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
5.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
5.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
5.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
5.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
4.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
4.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
4.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
4.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
4.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
4.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
4.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
4.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
4.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
4.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
4.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
4.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
4.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
4.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
3.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
3.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
3.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
3.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
3.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
3.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
3.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
3.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
3.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
3.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
3.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
3.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
3.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
2.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
2.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
2.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
2.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
2.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
2.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
2.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
2.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
1.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
1.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
1.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
1.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
1.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
1.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
1.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
1.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
1.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
0.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
0.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
0.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
0.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
0.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
0.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
0.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
0.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
0.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
0.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
0.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
0.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0069000003
Tumor
1.7
CPT0011240003
Tumor
1.7
CPT0075560003
Tumor
1.1
CPT0025170003
Tumor
1.1
CPT0012670003
Tumor
1.0
CPT0084560003
Tumor
1.0
CPT0066480003
Tumor
1.0
CPT0079510001
Normal
0.9
CPT0001270001
Normal
0.9
CPT0021240003
Tumor
0.9
CPT0088630003
Tumor
0.8
CPT0010120001
Normal
0.8
CPT0076330003
Tumor
0.8
CPT0012080003
Tumor
0.8
CPT0088550004
Tumor
0.7
CPT0092190003
Normal
0.7
CPT0081990003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0088500001
Normal
0.6
CPT0081600003
Tumor
0.6
CPT0077320001
Normal
0.5
CPT0000660001
Normal
0.5
CPT0085670003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0020130001
Normal
0.5
CPT0014450004
Tumor
0.5
CPT0084590001
Normal
0.4
CPT0088900003
Tumor
0.4
CPT0065820001
Normal
0.4
CPT0020120003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0002370001
Normal
0.3
CPT0086870003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0006530001
Normal
0.3
CPT0012290003
Normal
0.3
CPT0013790003
Normal
0.3
CPT0000640003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0000890001
Normal
0.3
CPT0086030003
Tumor
0.3
CPT0075130003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0078940001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0077140001
Normal
0.2
CPT0007470001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0001550001
Normal
0.2
CPT0019130003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0089040001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0086890003
Normal
0.1
CPT0069010001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0006730001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0079230003
Tumor
0.0
CPT0001340003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0025920001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0014350001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0066520001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0092310003
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0012280003
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0009000003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0065930003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0079000001
Normal
-0.2
CPT0078510003
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0069160003
Tumor
-0.2
CPT0079410003
Tumor
-0.2
CPT0092740003
Normal
-0.2
CPT0065430003
Tumor
-0.3
CPT0065450001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0001540009
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0087050003
Normal
-0.3
CPT0069190001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0012770003
Normal
-0.3
CPT0071150004
Tumor
-0.3
CPT0023710001
Normal
-0.3
CPT0006900003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0007870001
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0086950003
Tumor
-0.4
CPT0092290003
Tumor
-0.4
CPT0012570003
Normal
-0.4
CPT0010110003
Tumor
-0.4
CPT0064400001
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0089020003
Tumor
-0.4
CPT0023690003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0001230001
Normal
-0.4
CPT0000870016
Tumor
-0.5
CPT0002350011
Tumor
-0.5
CPT0088640003
Normal
-0.5
CPT0015810003
Tumor
-0.6
CPT0065810003
Tumor
-0.6
CPT0079300001
Normal
-0.6
CPT0014160003
Tumor
-0.6
CPT0087040003
Tumor
-0.6
CPT0089460004
Tumor
-0.6
CPT0086360003
Tumor
-0.6
CPT0065750003
Tumor
-0.6
CPT0012900004
Tumor
-0.6
CPT0026410003
Tumor
-0.7
CPT0012550003
Tumor
-0.7
CPT0000780007
Tumor
-0.7
CPT0001500009
Tumor
-0.7
CPT0024670003
Tumor
-0.7
CPT0002270011
Tumor
-0.8
CPT0078990003
Tumor
-0.8
CPT0001220008
Tumor
-0.8
CPT0086820003
Tumor
-0.8
CPT0079180003
Tumor
-0.8
CPT0023350003
Tumor
-0.9
CPT0007860003
Tumor
-0.9
CPT0012180003
Tumor
-1.0
CPT0017410003
Tumor
-1.0
CPT0078830003
Tumor
-1.1
CPT0011410003
Tumor
-1.1
CPT0015730003
Tumor
-1.1
CPT0025050003
Tumor
-1.1
CPT0088970003
Tumor
-1.7
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
