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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AFMID is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
87.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
48.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
27.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
20.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
15.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
15.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
10.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
10.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
10.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
6.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
5.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
5.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
4.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
4.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
3.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
3.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
3.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
3.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
3.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
2.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
2.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
2.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
2.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
2.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
1.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
1.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AFMID is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
304.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
139.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
96.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
91.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
82.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
76.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
75.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
61.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
56.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
56.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
52.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
50.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
49.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
48.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
48.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
47.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
46.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
46.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
45.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
45.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
45.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
45.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
44.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
44.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
44.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
44.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
43.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
43.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
42.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
42.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
41.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
41.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
41.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
41.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
41.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
41.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
40.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
40.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
40.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
40.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
40.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
39.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
39.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
39.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
39.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
38.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
38.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
38.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
37.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
37.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
37.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
37.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
37.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
37.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
37.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
37.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
36.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
36.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
36.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
36.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
36.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
35.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
35.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
35.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
34.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
34.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
34.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
34.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
34.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
34.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
34.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
34.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
34.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
34.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
34.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
34.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
34.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
33.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
33.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
33.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
33.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
33.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
33.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
33.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
33.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
33.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
33.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
33.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
32.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
32.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
32.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
32.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
32.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
32.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
32.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
32.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
32.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
32.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
32.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
32.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
32.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
31.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
31.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
31.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
31.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
31.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
31.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
31.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
31.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
31.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
31.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
31.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
31.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
31.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
31.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
31.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
31.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
31.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
30.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
30.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
30.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
30.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
30.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
30.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
30.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
30.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
30.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
30.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
30.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
30.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
30.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
30.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
30.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
30.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
29.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
29.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
29.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
29.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
29.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
29.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
29.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
29.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
29.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
29.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
29.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
29.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
29.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
28.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
28.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
28.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
28.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
28.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
28.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
28.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
28.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
28.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
28.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
28.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
28.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
28.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
28.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
28.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
28.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
28.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
28.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
28.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
27.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
27.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
27.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
27.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
27.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
27.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
27.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
27.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
27.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
27.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
27.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
27.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
26.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
26.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
26.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
26.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
26.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
26.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
26.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
26.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
26.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
26.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
26.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
26.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
26.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
26.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
26.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
26.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
26.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
26.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
26.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
25.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
25.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
25.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
25.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
25.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
25.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
25.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
25.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
25.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
25.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
25.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
25.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
25.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
25.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
25.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
25.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
24.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
24.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
24.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
24.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
24.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
24.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
24.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
24.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
24.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
24.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
24.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
24.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
24.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
24.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
24.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
24.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
23.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
23.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
23.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
23.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
23.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
23.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
23.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
23.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
23.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
23.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
23.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
23.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
23.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
23.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
22.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
22.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
22.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
22.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
22.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
22.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
22.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
22.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
22.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
22.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
22.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
22.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
22.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
22.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
22.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
22.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
22.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
22.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
22.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
22.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
22.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
22.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
21.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
21.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
21.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
21.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
21.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
21.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
21.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
21.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
21.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
21.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
21.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
21.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
21.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
21.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
21.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
21.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
20.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
20.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
20.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
20.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
20.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
20.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
20.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
20.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
20.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
20.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
20.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
20.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
20.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
20.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
20.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
20.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
20.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
20.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
19.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
19.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
19.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
19.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
19.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
19.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
19.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
19.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
19.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
19.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
19.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
19.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
19.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
19.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
19.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
19.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
18.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
18.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
18.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
18.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
18.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
18.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
18.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
18.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
18.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
18.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
18.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
18.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
18.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
18.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
18.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
18.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
18.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
18.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
18.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
18.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
18.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
17.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
17.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
17.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
17.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
17.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
17.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
17.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
17.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
17.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
17.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
16.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
16.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
16.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
16.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
16.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
16.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
16.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
16.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
16.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
16.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
16.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
16.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
16.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
16.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
16.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
15.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
15.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
15.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
15.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
15.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
15.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
15.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
15.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
15.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
15.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
14.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
14.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
14.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
14.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
13.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
13.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
13.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
13.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
13.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
13.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
13.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
12.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
12.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
12.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
12.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
12.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
11.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
10.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
10.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
10.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
10.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
9.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
9.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
8.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
6.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
4.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AFMID is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
97.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
46.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
40.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
39.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
39.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
38.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
37.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
35.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
35.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
34.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
33.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
32.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
32.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
32.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
32.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
32.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
32.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
30.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
30.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
30.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
30.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
29.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
29.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
29.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
28.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
28.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
27.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
27.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
27.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
26.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
26.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
26.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
26.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
25.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
25.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
25.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
25.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
25.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
25.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
24.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
24.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
24.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
23.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
23.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
23.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
23.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
23.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
23.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
23.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
22.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
22.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
22.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
21.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
21.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
20.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
20.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
20.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
20.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
19.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
19.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
19.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
18.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
18.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
17.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
17.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
16.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
16.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
15.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
15.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
13.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
13.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
13.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AFMID is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
181.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
158.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
143.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
121.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
118.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
117.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
108.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
104.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
102.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
101.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
93.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
93.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
85.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
83.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
80.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
79.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
79.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
78.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
77.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
74.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
73.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
72.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
72.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
70.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
68.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
68.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
62.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
62.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
61.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
61.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
61.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
60.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
59.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
58.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
58.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
58.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
57.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
56.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
55.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
55.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
55.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
54.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
53.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
53.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
52.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
52.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
52.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
52.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
51.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
50.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
49.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
49.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
48.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
48.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
48.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
48.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
48.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
47.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
47.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
47.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
46.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
46.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
46.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
46.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
45.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
45.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
45.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
44.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
44.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
44.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
44.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
44.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
44.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
44.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
44.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
43.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
43.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
43.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
42.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
42.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
42.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
42.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
42.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
42.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
42.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
41.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
41.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
41.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
41.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
41.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
41.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
40.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
40.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
40.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
40.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
40.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
40.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
39.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
39.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
39.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
39.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
38.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
38.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
38.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
38.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
38.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
38.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
38.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
38.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
37.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
37.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
37.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
37.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
37.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
37.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
37.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
36.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
36.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
36.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
36.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
36.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
35.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
35.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
35.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
35.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
35.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
35.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
35.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
34.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
34.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
34.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
34.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
34.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
34.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
34.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
34.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
34.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
34.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
33.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
33.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
33.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
33.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
33.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
33.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
33.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
33.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
33.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
32.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
32.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
32.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
32.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
32.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
32.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
32.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
32.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
31.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
31.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
31.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
31.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
31.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
31.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
31.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
30.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
30.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
30.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
30.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
30.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
30.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
29.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
29.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
29.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
29.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
29.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
29.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
29.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
28.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
28.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
27.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
27.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
27.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
27.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
27.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
27.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
27.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
26.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
26.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
26.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
26.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
26.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
26.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
26.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
26.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
25.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
25.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
25.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
25.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
25.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
25.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
25.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
25.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
24.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
24.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
24.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
24.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
23.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
23.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
23.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
23.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
23.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
23.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
23.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
23.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
23.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
23.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
22.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
22.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
22.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
22.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
22.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
21.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
21.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
21.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
20.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
20.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
20.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
20.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
20.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
20.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
19.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
19.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
19.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
19.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
18.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
18.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
17.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
17.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
17.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
17.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
16.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
15.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
15.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
15.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
15.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
15.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
15.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
14.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
14.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
14.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
14.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
14.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
14.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
14.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
14.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
13.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
13.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
12.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
12.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
10.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0092800003
Normal
1.4
CPT0014350001
Normal
1.4
CPT0065450001
Normal
1.2
CPT0009080003
Normal
1.2
CPT0077140001
Normal
1.2
CPT0079430001
Normal
1.2
CPT0089480003
Normal
1.1
CPT0006730001
Normal
1.1
CPT0066430001
Normal
1.1
CPT0088920001
Normal
1.1
CPT0078670001
Normal
1.1
CPT0012770003
Normal
1.1
CPT0078940001
Normal
1.0
CPT0079000001
Normal
1.0
CPT0025610001
Normal
1.0
CPT0023360001
Normal
1.0
CPT0007870001
Normal
1.0
CPT0092740003
Normal
0.9
CPT0023710001
Normal
0.9
CPT0020020001
Normal
0.9
CPT0012090003
Normal
0.9
CPT0086370003
Normal
0.9
CPT0006950001
Normal
0.9
CPT0078840001
Normal
0.9
CPT0000790001
Normal
0.8
CPT0026420001
Normal
0.8
CPT0082010001
Normal
0.8
CPT0088780001
Normal
0.8
CPT0013790003
Normal
0.8
CPT0064400001
Normal
0.7
CPT0069010001
Normal
0.7
CPT0001230001
Normal
0.7
CPT0010170001
Normal
0.7
CPT0012570003
Normal
0.7
CPT0025920001
Normal
0.7
CPT0025060001
Normal
0.6
CPT0001350001
Normal
0.6
CPT0081620001
Normal
0.6
CPT0019160001
Normal
0.6
CPT0088710001
Normal
0.6
CPT0075570001
Normal
0.6
CPT0087050003
Normal
0.6
CPT0065820001
Normal
0.6
CPT0063640001
Normal
0.5
CPT0020130001
Normal
0.5
CPT0009020003
Normal
0.5
CPT0018250001
Normal
0.5
CPT0077500001
Normal
0.5
CPT0086890003
Normal
0.5
CPT0088640003
Normal
0.5
CPT0012920003
Normal
0.5
CPT0076350001
Normal
0.5
CPT0086970003
Normal
0.4
CPT0012290003
Normal
0.4
CPT0002370001
Normal
0.4
CPT0000660001
Normal
0.4
CPT0017450001
Normal
0.3
CPT0001550001
Normal
0.3
CPT0014470001
Normal
0.3
CPT0012640003
Normal
0.3
CPT0088570001
Normal
0.3
CPT0066520001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0086830003
Normal
0.2
CPT0089040001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0007470001
Normal
0.1
CPT0088970003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0078530001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0069190001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0088500001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0006630003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0088900003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0000890001
Normal
-0.4
CPT0065810003
Tumor
-0.4
CPT0075170001
Normal
-0.4
CPT0000780007
Tumor
-0.4
CPT0079270003
Tumor
-0.4
CPT0010120001
Normal
-0.5
CPT0019130003
Tumor
-0.5
CPT0001540009
Tumor
-0.5
CPT0001270001
Normal
-0.5
CPT0023690003
Tumor
-0.5
CPT0086820003
Tumor
-0.5
CPT0078800003
Tumor
-0.5
CPT0025230003
Tumor
-0.5
CPT0011240003
Tumor
-0.6
CPT0025170003
Tumor
-0.6
CPT0078930003
Tumor
-0.6
CPT0019990003
Tumor
-0.6
CPT0026410003
Tumor
-0.6
CPT0006440003
Tumor
-0.6
CPT0079510001
Normal
-0.6
CPT0064370003
Tumor
-0.6
CPT0089460004
Tumor
-0.6
CPT0079480003
Tumor
-0.6
CPT0075720003
Tumor
-0.6
CPT0025580004
Tumor
-0.7
CPT0015810003
Tumor
-0.7
CPT0084590001
Normal
-0.7
CPT0012370003
Tumor
-0.7
CPT0086030003
Tumor
-0.7
CPT0088480003
Tumor
-0.7
CPT0025110003
Tumor
-0.8
CPT0002350011
Tumor
-0.8
CPT0065870003
Tumor
-0.8
CPT0063320003
Tumor
-0.8
CPT0021240003
Tumor
-0.8
CPT0014370004
Tumor
-0.8
CPT0007320003
Tumor
-0.8
CPT0078990003
Tumor
-0.8
CPT0088760003
Tumor
-0.8
CPT0077490003
Tumor
-0.8
CPT0010160003
Tumor
-0.8
CPT0063630003
Tumor
-0.8
CPT0077110003
Tumor
-0.8
CPT0012280003
Tumor
-0.8
CPT0001220008
Tumor
-0.9
CPT0009060003
Tumor
-0.9
CPT0088550004
Tumor
-0.9
CPT0088690003
Tumor
-0.9
CPT0092290003
Tumor
-0.9
CPT0020120003
Tumor
-0.9
CPT0015730003
Tumor
-0.9
CPT0065430003
Tumor
-0.9
CPT0077320001
Normal
-0.9
CPT0066470004
Tumor
-0.9
CPT0086870003
Tumor
-1.0
CPT0077310003
Tumor
-1.0
CPT0010110003
Tumor
-1.0
CPT0012080003
Tumor
-1.0
CPT0087040003
Tumor
-1.0
CPT0007860003
Tumor
-1.0
CPT0025880003
Tumor
-1.0
CPT0025350003
Tumor
-1.0
CPT0069000003
Tumor
-1.0
CPT0017410003
Tumor
-1.0
CPT0014450004
Tumor
-1.0
CPT0014160003
Tumor
-1.1
CPT0012550003
Tumor
-1.1
CPT0086950003
Tumor
-1.1
CPT0092190003
Normal
-1.1
CPT0002270011
Tumor
-1.1
CPT0017850003
Tumor
-1.1
CPT0024670003
Tumor
-1.2
CPT0092790003
Tumor
-1.2
CPT0025050003
Tumor
-1.2
CPT0081990003
Tumor
-1.2
CPT0065930003
Tumor
-1.2
CPT0001260009
Tumor
-1.2
CPT0065750003
Tumor
-1.3
CPT0081880003
Tumor
-1.3
CPT0066480003
Tumor
-1.3
CPT0076330003
Tumor
-1.3
CPT0001180009
Tumor
-1.3
CPT0079380003
Tumor
-1.3
CPT0079180003
Tumor
-1.4
CPT0088630003
Tumor
-1.4
CPT0075560003
Tumor
-1.4
CPT0081600003
Tumor
-1.4
CPT0000870016
Tumor
-1.4
CPT0000640003
Tumor
-1.4
CPT0092730003
Tumor
-1.4
CPT0089020003
Tumor
-1.4
CPT0015910003
Tumor
-1.5
CPT0023350003
Tumor
-1.5
CPT0012670003
Tumor
-1.5
CPT0092160003
Tumor
-1.5
CPT0012180003
Tumor
-1.5
CPT0086360003
Tumor
-1.5
CPT0084560003
Tumor
-1.6
CPT0075130003
Tumor
-1.6
CPT0065690003
Tumor
-1.6
CPT0078510003
Tumor
-1.6
CPT0079230003
Tumor
-1.7
CPT0025290003
Tumor
-1.8
CPT0078660003
Tumor
-1.8
CPT0069160003
Tumor
-1.9
CPT0079410003
Tumor
-1.9
CPT0011410003
Tumor
-1.9
CPT0001340003
Tumor
-1.9
CPT0085670003
Tumor
-2.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
