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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NGRN is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
84.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
154.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
144.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
133.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
133.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
130.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
127.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
125.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
124.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
123.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
109.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
109.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
105.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
104.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
103.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
100.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
98.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
97.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
97.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
96.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
96.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
93.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
93.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
91.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
90.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
90.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
89.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
86.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
86.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
85.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
83.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
83.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
82.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
82.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
77.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
77.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
76.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
76.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
76.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
76.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
75.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
74.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
73.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
71.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
68.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
68.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
67.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
67.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
66.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
64.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
64.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
63.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
57.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
56.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
56.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
56.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
55.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
55.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
53.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
51.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
46.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
42.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
41.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
39.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NGRN is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
65.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
639.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
150.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
142.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
138.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
138.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
128.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
119.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
117.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
113.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
112.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
110.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
107.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
103.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
102.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
102.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
102.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
101.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
100.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
98.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
98.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
98.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
97.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
97.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
97.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
96.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
96.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
95.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
94.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
94.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
93.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
93.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
93.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
93.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
93.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
91.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
91.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
91.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
91.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
90.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
90.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
90.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
90.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
90.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
90.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
89.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
89.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
89.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
89.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
88.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
88.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
88.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
88.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
88.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
88.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
87.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
87.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
87.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
87.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
86.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
86.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
86.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
86.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
86.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
85.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
85.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
85.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
85.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
84.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
84.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
84.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
84.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
84.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
84.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
84.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
83.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
83.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
83.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
82.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
82.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
82.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
82.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
81.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
81.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
81.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
81.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
81.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
81.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
80.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
80.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
80.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
80.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
80.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
80.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
80.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
80.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
79.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
79.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
79.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
79.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
79.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
79.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
79.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
79.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
78.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
78.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
78.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
78.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
77.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
77.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
77.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
77.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
77.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
76.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
76.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
76.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
76.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
76.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
76.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
76.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
76.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
76.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
75.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
75.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
75.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
75.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
75.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
75.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
75.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
74.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
74.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
74.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
74.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
74.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
74.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
74.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
74.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
74.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
73.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
73.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
73.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
73.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
73.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
73.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
73.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
72.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
72.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
72.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
72.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
72.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
72.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
72.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
72.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
71.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
71.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
71.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
71.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
71.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
71.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
71.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
71.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
71.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
71.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
71.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
71.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
71.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
71.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
71.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
70.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
70.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
70.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
70.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
70.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
70.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
70.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
70.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
70.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
70.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
70.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
70.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
70.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
69.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
69.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
69.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
69.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
69.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
69.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
69.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
69.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
68.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
68.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
68.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
68.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
68.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
68.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
68.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
68.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
68.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
68.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
68.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
68.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
68.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
68.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
67.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
67.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
67.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
67.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
67.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
67.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
67.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
67.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
67.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
67.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
67.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
67.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
67.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
66.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
66.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
66.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
66.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
66.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
66.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
66.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
66.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
66.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
66.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
66.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
65.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
65.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
65.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
65.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
65.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
65.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
65.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
65.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
65.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
65.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
65.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
65.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
65.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
64.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
64.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
64.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
64.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
64.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
64.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
64.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
64.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
64.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
64.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
64.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
64.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
64.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
63.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
63.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
63.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
63.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
63.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
63.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
63.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
63.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
63.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
63.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
63.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
63.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
62.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
62.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
62.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
62.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
62.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
62.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
62.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
62.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
62.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
62.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
62.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
62.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
61.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
61.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
61.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
61.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
61.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
61.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
61.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
61.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
61.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
61.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
61.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
61.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
61.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
61.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
61.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
61.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
61.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
61.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
61.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
61.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
61.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
61.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
61.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
60.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
60.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
60.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
60.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
60.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
60.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
60.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
60.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
60.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
59.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
59.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
59.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
59.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
59.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
59.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
59.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
59.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
59.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
59.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
58.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
58.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
58.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
58.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
57.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
57.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
57.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
57.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
57.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
57.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
57.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
56.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
56.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
56.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
56.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
56.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
56.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
56.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
56.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
56.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
56.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
55.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
55.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
55.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
55.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
55.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
55.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
55.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
54.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
54.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
54.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
54.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
54.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
54.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
54.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
54.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
54.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
53.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
53.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
53.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
53.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
53.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
53.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
53.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
53.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
53.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
52.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
52.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
52.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
52.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
52.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
52.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
52.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
52.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
52.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
51.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
51.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
51.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
51.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
51.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
51.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
51.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
51.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
51.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
51.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
51.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
50.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
50.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
50.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
50.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
50.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
50.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
50.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
50.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
50.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
50.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
50.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
50.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
49.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
49.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
49.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
49.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
49.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
49.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
49.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
49.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
49.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
49.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
49.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
49.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
49.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
49.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
49.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
49.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
48.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
48.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
48.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
48.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
48.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
48.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
48.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
48.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
48.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
48.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
48.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
48.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
48.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
47.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
47.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
47.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
47.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
47.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
47.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
46.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
46.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
46.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
46.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
46.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
46.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
46.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
46.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
46.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
46.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
46.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
46.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
46.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
46.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
45.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
45.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
45.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
45.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
45.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
45.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
44.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
44.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
44.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
44.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
44.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
44.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
43.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
43.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
43.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
43.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
43.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
43.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
43.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
42.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
42.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
42.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
42.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
42.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
42.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
42.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
41.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
41.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
41.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
41.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
41.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
40.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
40.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
40.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
40.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
39.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
39.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
38.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
38.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
38.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
38.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
38.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
38.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
37.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
36.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
35.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
35.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
35.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
35.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
35.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
34.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
34.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
34.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
34.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
34.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
34.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
33.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
33.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
33.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
32.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
32.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
32.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
31.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
31.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
30.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
30.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
29.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
27.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
27.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
26.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
25.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
25.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
23.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
21.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NGRN is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
68.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
952.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
129.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
108.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
106.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
102.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
97.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
88.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
88.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
87.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
86.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
80.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
78.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
78.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
78.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
77.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
76.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
72.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
72.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
71.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
71.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
70.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
70.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
70.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
69.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
69.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
69.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
69.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
68.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
67.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
67.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
66.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
66.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
65.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
64.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
64.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
62.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
61.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
61.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
60.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
60.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
60.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
59.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
59.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
58.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
58.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
58.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
57.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
57.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
57.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
56.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
56.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
55.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
55.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
54.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
54.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
54.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
54.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
53.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
53.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
53.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
52.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
52.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
51.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
51.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
51.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
51.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
50.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
50.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
50.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
50.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
49.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
49.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
49.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
49.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
49.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
48.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
48.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
48.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
47.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
46.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
46.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
46.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
44.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
44.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
44.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
44.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
42.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
42.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
42.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
41.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
39.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
38.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
38.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
35.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
31.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
29.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
28.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
27.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NGRN is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
83.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
200.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
199.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
189.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
184.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
168.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
168.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
161.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
153.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
147.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
145.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
141.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
138.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
137.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
134.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
133.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
132.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
132.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
130.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
129.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
125.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
124.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
124.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
124.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
123.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
123.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
122.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
120.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
120.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
119.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
119.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
118.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
118.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
118.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
117.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
117.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
117.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
117.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
116.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
116.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
115.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
114.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
114.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
114.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
113.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
113.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
112.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
112.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
111.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
111.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
110.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
110.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
110.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
108.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
107.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
107.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
106.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
106.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
106.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
105.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
105.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
104.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
103.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
103.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
103.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
102.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
102.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
102.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
102.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
101.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
100.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
100.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
100.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
99.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
99.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
99.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
99.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
97.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
97.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
96.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
96.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
96.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
96.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
96.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
95.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
95.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
94.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
93.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
93.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
93.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
93.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
93.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
91.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
91.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
91.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
91.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
91.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
91.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
91.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
90.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
90.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
90.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
89.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
89.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
89.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
88.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
88.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
88.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
87.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
86.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
86.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
86.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
86.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
86.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
85.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
85.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
85.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
84.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
84.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
84.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
84.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
84.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
83.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
83.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
83.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
83.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
83.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
83.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
83.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
83.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
82.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
82.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
82.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
82.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
82.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
82.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
82.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
82.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
81.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
81.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
81.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
80.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
80.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
80.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
79.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
79.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
79.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
79.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
79.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
79.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
79.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
79.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
78.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
78.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
78.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
78.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
77.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
77.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
76.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
76.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
76.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
75.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
75.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
74.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
74.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
74.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
73.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
73.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
73.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
73.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
73.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
73.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
72.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
72.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
72.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
72.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
71.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
71.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
71.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
71.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
71.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
71.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
70.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
70.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
70.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
70.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
70.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
70.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
69.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
69.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
69.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
68.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
68.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
68.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
68.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
67.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
67.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
67.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
66.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
66.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
66.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
65.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
65.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
65.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
64.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
64.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
64.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
64.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
64.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
63.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
63.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
63.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
62.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
61.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
61.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
61.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
61.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
60.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
60.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
60.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
60.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
59.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
59.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
58.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
58.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
58.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
58.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
58.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
58.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
57.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
57.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
57.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
57.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
56.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
55.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
54.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
54.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
54.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
54.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
53.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
53.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
53.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
52.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
52.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
52.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
52.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
52.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
51.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
51.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
50.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
50.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
50.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
50.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
49.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
49.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
49.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
48.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
47.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
47.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
46.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
46.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
46.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
46.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
45.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
45.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
45.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
44.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
44.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
42.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
42.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
42.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
39.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
38.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
37.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
36.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
36.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
36.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
33.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
32.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
30.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
24.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
22.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.4
CPT0002270011
Tumor
1.3
CPT0025060001
Normal
1.0
CPT0078660003
Tumor
0.9
CPT0006950001
Normal
0.8
CPT0078530001
Normal
0.8
CPT0012180003
Tumor
0.8
CPT0012090003
Normal
0.7
CPT0014470001
Normal
0.7
CPT0012770003
Normal
0.7
CPT0092310003
Normal
0.6
CPT0086890003
Normal
0.6
CPT0065450001
Normal
0.6
CPT0018250001
Normal
0.5
CPT0012670003
Tumor
0.5
CPT0078670001
Normal
0.5
CPT0079000001
Normal
0.5
CPT0023710001
Normal
0.5
CPT0009080003
Normal
0.5
CPT0000790001
Normal
0.5
CPT0088500001
Normal
0.5
CPT0081620001
Normal
0.5
CPT0025610001
Normal
0.5
CPT0069010001
Normal
0.4
CPT0001500009
Tumor
0.4
CPT0079430001
Normal
0.4
CPT0001230001
Normal
0.4
CPT0076330003
Tumor
0.4
CPT0026420001
Normal
0.4
CPT0012570003
Normal
0.4
CPT0013790003
Normal
0.4
CPT0088570001
Normal
0.4
CPT0010170001
Normal
0.4
CPT0088920001
Normal
0.4
CPT0012290003
Normal
0.4
CPT0020130001
Normal
0.4
CPT0014350001
Normal
0.4
CPT0064400001
Normal
0.4
CPT0092740003
Normal
0.4
CPT0077140001
Normal
0.3
CPT0007470001
Normal
0.3
CPT0001350001
Normal
0.3
CPT0078840001
Normal
0.3
CPT0019160001
Normal
0.3
CPT0087050003
Normal
0.3
CPT0075170001
Normal
0.3
CPT0078940001
Normal
0.3
CPT0077500001
Normal
0.3
CPT0012920003
Normal
0.3
CPT0023360001
Normal
0.3
CPT0076350001
Normal
0.3
CPT0064370003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0014130001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0017450001
Normal
0.3
CPT0012640003
Normal
0.3
CPT0088780001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0024680001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0001260009
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0006730001
Normal
0.2
CPT0066520001
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0088710001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0001510001
Normal
0.2
CPT0086830003
Normal
0.1
CPT0000890001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0066430001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0015730003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0001190001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0001270001
Normal
-0.1
CPT0007320003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0021240003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0025050003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0065810003
Tumor
-0.2
CPT0012370003
Tumor
-0.3
CPT0069190001
Normal
-0.3
CPT0007860003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0017410003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0084590001
Normal
-0.3
CPT0006630003
Tumor
-0.4
CPT0086360003
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0012080003
Tumor
-0.4
CPT0025880003
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0078990003
Tumor
-0.4
CPT0001540009
Tumor
-0.4
CPT0084560003
Tumor
-0.4
CPT0079480003
Tumor
-0.4
CPT0001180009
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0001340003
Tumor
-0.5
CPT0023350003
Tumor
-0.5
CPT0088550004
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0088480003
Tumor
-0.5
CPT0081880003
Tumor
-0.5
CPT0089020003
Tumor
-0.5
CPT0015910003
Tumor
-0.6
CPT0010110003
Tumor
-0.6
CPT0011240003
Tumor
-0.6
CPT0088630003
Tumor
-0.6
CPT0092730003
Tumor
-0.6
CPT0071150004
Tumor
-0.6
CPT0087040003
Tumor
-0.6
CPT0025110003
Tumor
-0.6
CPT0081600003
Tumor
-0.6
CPT0025230003
Tumor
-0.7
CPT0077320001
Normal
-0.7
CPT0065750003
Tumor
-0.7
CPT0025170003
Tumor
-0.7
CPT0063320003
Tumor
-0.7
CPT0081990003
Tumor
-0.7
CPT0092290003
Tumor
-0.7
CPT0075720003
Tumor
-0.8
CPT0066480003
Tumor
-0.8
CPT0065930003
Tumor
-0.8
CPT0086030003
Tumor
-0.8
CPT0075560003
Tumor
-0.8
CPT0079380003
Tumor
-0.8
CPT0025580004
Tumor
-0.9
CPT0065870003
Tumor
-0.9
CPT0023690003
Tumor
-0.9
CPT0069160003
Tumor
-0.9
CPT0079230003
Tumor
-0.9
CPT0079270003
Tumor
-0.9
CPT0025350003
Tumor
-1.0
CPT0077310003
Tumor
-1.0
CPT0065690003
Tumor
-1.1
CPT0001220008
Tumor
-1.2
CPT0078510003
Tumor
-1.4
CPT0014160003
Tumor
-1.6
CPT0025290003
Tumor
-1.7
CPT0000640003
Tumor
-2.2
CPT0006900003
Tumor
-2.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
