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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
58.4
nTPM
HPA Brain:
108.7
nTPM
GTEx:
58.4
nTPM
FANTOM5:
203.6
Scaled Tags Per Million
Pig:
53.5
nTPM
Mouse:
165.6
nTPM
Allen mouse:
11.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
108.7
Sample id
Sample description
nTPM
Amygdala nTPM: 103.1
2814
Male, age 76, right hemisphere
126.1
2514
Male, age 75, right hemisphere
123.7
2517
Female, age 94, left hemisphere
101.0
2695
Female, age 67, right hemisphere
85.7
1987
Female, age 91, left hemisphere
79.0
Basal amygdala nTPM: 102.4
2609
Male, age 75, right hemisphere
129.2
1955
Male, age 76, both hemispheres
116.0
2685
Female, age 94, left hemisphere
107.0
2110
Male, age 80, left hemisphere
98.3
2243
Female, age 91, right hemisphere
83.7
2827
Female, age 67, right hemisphere
80.5
Central amygdala nTPM: 106.6
1905
Male, age 76, both hemispheres
122.4
2515
Male, age 75, right hemisphere
119.7
2239
Male, age 80, left hemisphere
112.8
2701
Female, age 91, right hemisphere
95.0
2826
Female, age 94, left hemisphere
83.2
Corticomedial amygdala nTPM: 108.7
2429
Female, age 94, left hemisphere
128.0
2428
Male, age 75, right hemisphere
127.5
2240
Male, age 76, both hemispheres
118.0
2535
Female, age 67, right hemisphere
109.9
2242
Female, age 91, right hemisphere
86.5
2829
Male, age 80, left hemisphere
82.4
Lateral amygdala nTPM: 94.7
2516
Male, age 75, right hemisphere
125.7
2255
Female, age 91, right hemisphere
107.7
1883
Male, age 76, both hemispheres
104.0
2534
Female, age 94, left hemisphere
89.3
2256
Male, age 80, left hemisphere
88.3
2830
Female, age 67, right hemisphere
53.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
58.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 58.4
Samples: 152
Max nTPM: 124.4
Min nTPM: 4.1
Std nTPM: 18.7
Median nTPM: 55.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
124.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
118.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
113.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
111.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
110.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
99.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
96.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
94.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
93.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
93.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
88.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
87.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
86.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
86.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
84.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
81.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
79.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
78.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
78.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
76.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
75.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
74.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
74.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
73.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
73.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
73.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
73.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
73.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
71.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
70.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
70.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
70.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
70.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
69.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
69.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
68.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
68.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
67.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
67.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
66.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
66.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
65.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
64.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
63.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
63.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
62.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
62.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
61.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
61.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
61.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
60.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
60.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
60.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
60.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
60.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
60.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
59.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
58.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
58.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
58.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
58.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
58.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
57.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
57.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
57.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
57.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
57.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
57.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
57.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
56.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
56.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
56.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
56.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
55.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
55.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
55.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
55.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
55.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
55.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
55.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
55.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
54.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
54.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
54.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
54.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
54.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
54.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
53.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
53.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
53.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
53.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
53.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
52.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
52.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
52.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
52.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
51.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
51.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
51.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
51.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
50.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
50.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
50.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
50.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
50.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
50.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
48.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
48.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
47.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
47.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
47.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
47.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
47.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
46.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
45.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
45.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
45.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
45.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
45.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
44.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
44.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
44.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
44.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
43.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
43.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
43.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
43.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
43.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
43.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
42.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
42.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
42.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
42.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
42.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
41.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
40.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
40.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
39.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
38.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
37.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
36.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
35.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
35.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
32.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
32.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
30.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
30.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
27.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
27.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
23.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
20.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
4.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
165.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 165.6
Samples: 4
Max nTPM: 177.6
Min nTPM: 159.5
Sample A
Male
162.4
Sample B
Male
159.5
Sample C
Female
177.6
Sample D
Female
162.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.