HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:39.5 nTPM
HPA Brain:52.5 nTPM
GTEx:39.5 nTPM
FANTOM5:49.5 Scaled Tags Per Million
Pig:73.4 nTPM
Mouse:108.5 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 52.5
Sample id Sample description nTPM
Hippocampus
nTPM: 45.0
1898 Male, age 80, left hemisphere 57.6
1855 Male, age 76, left hemisphere 46.9
2148 Female, age 91, left hemisphere 46.2
2621 Female, age 67, right hemisphere 41.9
1911 Female, age 85, right hemisphere 40.4
2529 Female, age 94, left hemisphere 37.1
Dentate gyrus
nTPM: 51.1
1927 Female, age 91, both hemispheres 62.7
2528 Male, age 74, both hemispheres 51.4
2010 Male, age 76, both hemispheres 49.6
2246 Female, age 85, both hemispheres 48.3
2530 Female, age 94, left hemisphere 47.5
2531 Female, age 67, both hemispheres 47.1
Entorhinal gyrus
nTPM: 52.5
2764 Male, age 80, right hemisphere 62.4
2613 Female, age 94, left hemisphere 61.8
1787 Male, age 76, left hemisphere 56.5
1938 Female, age 85, left hemisphere 56.3
2117 Female, age 91, right hemisphere 46.5
2686 Male, age 75, right hemisphere 31.3
Hippocampus, CA1
nTPM: 52.2
2749 Male, age 80, left hemisphere 72.5
2045 Male, age 76, both hemispheres 49.3
1873 Female, age 85, both hemispheres 48.6
2527 Male, age 74, both hemispheres 46.3
2082 Female, age 91, right hemisphere 44.3
Hippocampus, CA2
nTPM: 48.0
1963 Male, age 80, left hemisphere 58.2
1892 Male, age 76, both hemispheres 55.6
2249 Male, age 74, both hemispheres 52.1
2437 Female, age 94, left hemisphere 44.5
1940 Female, age 85, left hemisphere 39.7
2113 Female, age 91, right hemisphere 37.9
Hippocampus, CA3
nTPM: 48.6
2620 Female, age 94, left hemisphere 61.1
2436 Male, age 74, both hemispheres 51.6
2137 Male, age 80, left hemisphere 50.8
1867 Male, age 76, both hemispheres 47.2
2861 Female, age 67, both hemispheres 42.1
1891 Female, age 85, both hemispheres 38.5
Parahippocampal cortex
nTPM: 41.0
1990 Female, age 91, right hemisphere 55.5
2250 Female, age 67, right hemisphere 50.9
1933 Female, age 85, both hemispheres 50.7
2245 Female, age 91, both hemispheres 43.6
2693 Female, age 94, both hemispheres 41.3
1850 Male, age 80, both hemispheres 40.4
2018 Male, age 76, both hemispheres 39.8
2532 Female, age 72, left hemisphere 32.1
2622 Female, age 67, right hemisphere 28.8
2692 Male, age 74, both hemispheres 27.3
Perirhinal gyrus
nTPM: 48.2
1847 Female, age 91, left hemisphere 66.1
2848 Male, age 76, right hemisphere 50.3
1794 Male, age 80, right hemisphere 45.0
2521 Female, age 94, right hemisphere 41.9
1841 Female, age 85, right hemisphere 37.9
Subiculum
nTPM: 43.8
1977 Female, age 85, both hemispheres 62.0
1901 Male, age 80, both hemispheres 43.9
2619 Male, age 74, both hemispheres 43.1
2729 Female, age 91, right hemisphere 41.0
2438 Female, age 94, left hemisphere 38.8
2042 Male, age 76, both hemispheres 33.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 39.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.5
Samples: 197

Max nTPM: 90.8
Min nTPM: 9.0
Std nTPM: 14.7
Median nTPM: 38.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 90.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 77.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 77.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 76.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 76.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 74.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 73.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 69.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 67.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 67.3
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 66.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 49.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.5
FF:10169-103B7 60 years, female 59.1
FF:10153-102I9 76 years, female 39.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 73.4
Pig sample Sample description nTPM
Subiculum
nTPM: 73.4
Samples: 4

Max nTPM: 93.0
Min nTPM: 61.1
Sample A Female 93.0
Sample B Female 67.9
Sample C Male 71.6
Sample D Male 61.1
Dorsal hippocampus
nTPM: 69.5
Samples: 4

Max nTPM: 83.5
Min nTPM: 59.9
Sample A Female 83.5
Sample B Female 71.5
Sample C Male 63.0
Sample D Male 59.9
Entorhinal cortex
nTPM: 55.9
Samples: 4

Max nTPM: 62.9
Min nTPM: 50.5
Sample A Female 57.7
Sample B Female 52.6
Sample C Male 62.9
Sample D Male 50.5
Ventral hippocampus
nTPM: 73.1
Samples: 4

Max nTPM: 90.1
Min nTPM: 61.1
Sample A Female 76.0
Sample B Female 61.1
Sample C Male 90.1
Sample D Male 65.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 108.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 108.5
Samples: 4

Max nTPM: 128.9
Min nTPM: 88.0
Sample A Male 88.0
Sample B Male 101.5
Sample C Female 115.6
Sample D Female 128.9
Hippocampal formation
nTPM: 103.6
Samples: 4

Max nTPM: 117.5
Min nTPM: 90.4
Sample A Male 117.5
Sample B Male 96.7
Sample C Female 90.4
Sample D Female 109.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
689 Antisense, RP_040315_01_07, Mouse strain C57BL/6J (56 days, male) 13.4
688 Antisense, RP_040315_01_07, Mouse strain C57BL/6J (56 days, male) 12.3
71764488 Antisense, RP_050926_01_C06, Mouse strain C57BL/6J (56 days, male) 0.1

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