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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
41.8
nTPM
HPA Brain:
49.2
nTPM
GTEx:
41.8
nTPM
FANTOM5:
52.1
Scaled Tags Per Million
Pig:
68.1
nTPM
Mouse:
150.7
nTPM
Allen mouse:
8.6
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
49.2
Sample id
Sample description
nTPM
Amygdala nTPM: 45.7
1987
Female, age 91, left hemisphere
76.8
2517
Female, age 94, left hemisphere
49.4
2514
Male, age 75, right hemisphere
45.4
2814
Male, age 76, right hemisphere
32.9
2695
Female, age 67, right hemisphere
24.0
Basal amygdala nTPM: 41.3
2110
Male, age 80, left hemisphere
50.9
2243
Female, age 91, right hemisphere
50.2
2685
Female, age 94, left hemisphere
47.4
2609
Male, age 75, right hemisphere
38.2
1955
Male, age 76, both hemispheres
36.6
2827
Female, age 67, right hemisphere
24.6
Central amygdala nTPM: 49.2
2701
Female, age 91, right hemisphere
68.5
2239
Male, age 80, left hemisphere
52.9
2515
Male, age 75, right hemisphere
48.9
2826
Female, age 94, left hemisphere
43.8
1905
Male, age 76, both hemispheres
31.9
Corticomedial amygdala nTPM: 45.0
2829
Male, age 80, left hemisphere
56.9
2242
Female, age 91, right hemisphere
55.7
2429
Female, age 94, left hemisphere
47.6
2428
Male, age 75, right hemisphere
39.2
2535
Female, age 67, right hemisphere
37.8
2240
Male, age 76, both hemispheres
32.5
Lateral amygdala nTPM: 41.0
2255
Female, age 91, right hemisphere
60.2
2534
Female, age 94, left hemisphere
55.2
2256
Male, age 80, left hemisphere
37.8
2516
Male, age 75, right hemisphere
37.3
1883
Male, age 76, both hemispheres
34.0
2830
Female, age 67, right hemisphere
21.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
41.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 41.8
Samples: 152
Max nTPM: 88.3
Min nTPM: 7.8
Std nTPM: 14.3
Median nTPM: 40.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
88.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
85.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
83.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
75.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
74.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
69.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
69.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
68.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
68.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
65.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
63.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
63.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
63.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
62.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
62.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
61.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
58.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
58.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
57.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
57.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
57.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
56.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
56.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
56.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
56.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
54.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
54.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
53.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
53.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
51.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
51.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
51.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
51.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
51.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
51.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
50.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
50.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
50.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
49.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
49.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
49.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
48.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
48.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
47.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
47.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
47.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
47.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
47.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
47.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
45.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
45.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
45.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
45.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
44.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
44.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
44.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
44.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
43.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
43.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
43.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
43.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
43.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
43.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
42.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
42.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
42.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
41.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
41.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
41.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
41.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
41.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
41.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
40.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
40.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
40.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
40.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
40.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
40.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
40.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
39.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
39.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
39.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
39.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
39.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
39.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
38.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
38.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
38.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
38.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
37.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
37.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
36.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
36.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
36.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
36.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
35.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
35.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
35.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
34.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
34.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
34.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
34.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
34.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
34.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
34.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
33.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
33.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
33.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
33.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
33.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
32.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
32.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
31.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
31.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
31.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
31.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
31.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
30.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
30.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
30.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
30.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
29.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
29.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
29.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
28.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
28.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
27.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
27.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
27.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
27.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
27.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
26.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
26.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
26.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
26.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
26.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
26.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
25.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
25.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
25.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
24.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
23.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
23.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
22.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
20.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
19.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
18.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
17.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
16.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
16.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
16.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
7.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
150.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 150.7
Samples: 4
Max nTPM: 184.8
Min nTPM: 132.6
Sample A
Male
184.8
Sample B
Male
141.9
Sample C
Female
132.6
Sample D
Female
143.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
