We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LIMK2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
61.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
57.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
49.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
45.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
43.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
43.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
41.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
41.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
35.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
34.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
33.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
32.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
32.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
32.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
32.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
30.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
29.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
26.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
26.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
26.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
26.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
23.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
21.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
21.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
20.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
19.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
19.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
18.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
17.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
16.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
15.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
14.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
13.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
13.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
12.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
12.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
12.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
12.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
11.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
11.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
11.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
11.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
10.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
9.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
9.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
8.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
5.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LIMK2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
72.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
59.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
54.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
52.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
49.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
45.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
45.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
44.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
44.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
44.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
44.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
43.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
43.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
42.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
42.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
42.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
41.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
41.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
39.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
39.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
39.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
37.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
37.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
36.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
36.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
34.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
33.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
33.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
33.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
33.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
33.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
32.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
32.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
32.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
32.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
31.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
31.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
31.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
31.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
31.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
31.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
31.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
31.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
30.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
30.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
30.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
30.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
29.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
29.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
29.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
29.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
29.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
29.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
28.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
28.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
28.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
28.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
28.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
28.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
28.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
27.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
27.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
27.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
27.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
27.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
27.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
26.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
26.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
26.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
26.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
26.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
25.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
25.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
25.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
25.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
25.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
25.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
25.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
25.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
25.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
25.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
25.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
25.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
25.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
24.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
24.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
24.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
24.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
24.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
24.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
24.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
24.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
24.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
24.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
24.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
24.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
24.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
24.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
23.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
23.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
23.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
23.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
23.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
23.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
23.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
23.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
23.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
23.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
23.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
23.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
23.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
23.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
22.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
22.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
22.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
22.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
22.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
22.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
22.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
22.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
22.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
22.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
22.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
22.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
21.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
21.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
21.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
21.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
21.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
21.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
21.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
21.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
21.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
21.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
21.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
21.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
21.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
21.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
20.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
20.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
20.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
20.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
20.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
20.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
20.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
20.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
20.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
20.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
20.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
20.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
20.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
20.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
20.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
19.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
19.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
19.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
19.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
19.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
19.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
19.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
19.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
19.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
19.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
19.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
19.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
19.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
19.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
19.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
19.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
19.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
19.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
19.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
19.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
19.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
18.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
18.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
18.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
18.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
18.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
18.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
18.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
18.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
18.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
18.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
18.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
18.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
18.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
18.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
17.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
17.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
17.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
17.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
17.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
17.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
17.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
17.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
17.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
17.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
17.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
17.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
17.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
17.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
17.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
16.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
16.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
16.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
16.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
16.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
16.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
16.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
16.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
16.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
16.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
16.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
16.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
16.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
16.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
16.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
16.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
16.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
15.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
15.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
15.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
15.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
15.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
15.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
15.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
15.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
15.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
15.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
15.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
15.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
15.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
15.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
15.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
15.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
15.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
15.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
14.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
14.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
14.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
14.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
14.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
14.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
14.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
14.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
14.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
14.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
14.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
14.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
14.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
14.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
14.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
14.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
13.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
13.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
13.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
13.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
13.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
13.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
13.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
13.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
13.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
13.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
13.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
13.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
13.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
13.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
12.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
12.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
12.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
12.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
12.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
12.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
12.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
12.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
12.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
12.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
12.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
12.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
11.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
11.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
11.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
11.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
11.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
11.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
11.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
11.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
11.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
11.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
10.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
10.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
10.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
10.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
10.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
10.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
10.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
10.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
10.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
9.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
9.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
9.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
9.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
9.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
9.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
8.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
8.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
8.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
8.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
8.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
8.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
8.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
8.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
8.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
8.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
8.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
8.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
8.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
7.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
7.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
7.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
6.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
6.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
6.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
5.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LIMK2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
77.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
66.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
64.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
58.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
53.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
51.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
51.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
45.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
44.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
43.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
42.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
41.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
41.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
39.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
35.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
34.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
34.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
34.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
33.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
33.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
31.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
31.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
31.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
30.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
30.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
30.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
29.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
29.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
29.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
28.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
28.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
26.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
26.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
25.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
24.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
24.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
24.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
23.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
23.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
22.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
22.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
21.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
21.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
21.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
21.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
20.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
20.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
20.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
20.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
19.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
18.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
18.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
18.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
18.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
17.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
17.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
16.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
16.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
15.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
15.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
15.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
14.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
14.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
13.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
13.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
13.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
12.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
12.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
10.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
10.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
9.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
9.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
9.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
8.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
8.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
5.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
5.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LIMK2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
86.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
67.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
65.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
65.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
64.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
63.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
62.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
53.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
51.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
51.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
50.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
49.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
49.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
47.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
47.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
46.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
46.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
45.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
44.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
43.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
42.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
41.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
41.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
39.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
38.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
38.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
38.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
37.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
35.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
35.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
34.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
34.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
33.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
33.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
33.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
32.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
32.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
32.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
30.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
30.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
30.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
30.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
30.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
29.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
28.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
28.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
26.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
26.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
26.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
25.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
24.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
24.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
23.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
23.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
23.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
23.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
22.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
22.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
22.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
22.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
22.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
22.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
22.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
22.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
21.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
21.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
21.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
21.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
20.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
20.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
20.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
20.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
20.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
20.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
19.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
19.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
19.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
18.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
18.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
18.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
18.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
18.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
17.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
17.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
17.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
17.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
17.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
17.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
16.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
16.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
16.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
16.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
16.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
15.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
15.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
15.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
15.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
15.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
15.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
15.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
14.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
14.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
14.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
14.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
14.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
14.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
14.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
14.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
14.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
13.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
13.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
13.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
13.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
13.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
13.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
13.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
13.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
13.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
13.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
12.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
12.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
12.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
12.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
12.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
12.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
12.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
12.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
12.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
11.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
11.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
11.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
11.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
11.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
11.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
11.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
11.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
10.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
10.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
10.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
10.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
10.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
10.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
10.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
10.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
10.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
10.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
10.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
9.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
9.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
9.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
9.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
9.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
9.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
9.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
8.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
8.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
8.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
8.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
8.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
8.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
8.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
8.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
8.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
8.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
8.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
7.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
7.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
7.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
7.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
7.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
7.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
6.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
6.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
6.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
6.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
6.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
6.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
6.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
6.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
6.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
5.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
5.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
5.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
5.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
4.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
4.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
3.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
3.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
2.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0065930003
Tumor
1.5
CPT0011410003
Tumor
1.0
CPT0001180009
Tumor
1.0
CPT0069160003
Tumor
1.0
CPT0012550003
Tumor
0.9
CPT0084560003
Tumor
0.9
CPT0023350003
Tumor
0.8
CPT0021240003
Tumor
0.8
CPT0079410003
Tumor
0.7
CPT0015810003
Tumor
0.7
CPT0001340003
Tumor
0.7
CPT0025230003
Tumor
0.7
CPT0012180003
Tumor
0.7
CPT0079380003
Tumor
0.7
CPT0086030003
Tumor
0.6
CPT0012670003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0000640003
Tumor
0.6
CPT0065430003
Tumor
0.6
CPT0076330003
Tumor
0.5
CPT0089020003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0007860003
Tumor
0.5
CPT0063630003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0088480003
Tumor
0.5
CPT0079180003
Tumor
0.5
CPT0025050003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0086820003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0078660003
Tumor
0.4
CPT0002270011
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0088550004
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0065750003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0077320001
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0075720003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0069190001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0065690003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0077310003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0026420001
Normal
-0.1
CPT0017850003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0065810003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0079270003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0063330001
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0006440003
Tumor
-0.3
CPT0025060001
Normal
-0.3
CPT0079300001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0079430001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0088710001
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0025580004
Tumor
-0.3
CPT0092800003
Normal
-0.3
CPT0001550001
Normal
-0.4
CPT0078990003
Tumor
-0.4
CPT0012570003
Normal
-0.4
CPT0076350001
Normal
-0.4
CPT0082010001
Normal
-0.4
CPT0001510001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0023710001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0000890001
Normal
-0.4
CPT0012640003
Normal
-0.4
CPT0001230001
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0092310003
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0088970003
Tumor
-0.4
CPT0089480003
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0024680001
Normal
-0.4
CPT0081620001
Normal
-0.4
CPT0065450001
Normal
-0.4
CPT0009080003
Normal
-0.4
CPT0014350001
Normal
-0.4
CPT0092740003
Normal
-0.4
CPT0012770003
Normal
-0.5
CPT0078940001
Normal
-0.5
CPT0079000001
Normal
-0.5
CPT0065820001
Normal
-0.5
CPT0010170001
Normal
-0.5
CPT0088780001
Normal
-0.5
CPT0088920001
Normal
-0.5
CPT0088640003
Normal
-0.5
CPT0023360001
Normal
-0.5
CPT0026410003
Tumor
-0.5
CPT0077140001
Normal
-0.6
CPT0025610001
Normal
-0.6
CPT0006950001
Normal
-0.7
CPT0007870001
Normal
-0.7
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
