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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KPNA2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
96.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
38.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
31.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
23.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
22.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
18.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
15.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
13.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
13.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
9.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
9.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
8.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
7.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
7.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
6.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
5.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
5.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
4.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
4.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
4.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
4.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
3.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
1.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KPNA2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
189.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
170.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
164.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
122.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
107.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
101.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
92.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
85.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
77.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
75.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
65.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
64.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
58.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
58.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
57.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
54.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
53.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
52.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
52.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
45.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
45.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
44.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
44.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
43.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
42.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
41.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
41.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
41.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
40.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
40.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
40.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
39.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
39.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
38.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
38.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
37.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
37.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
37.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
37.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
37.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
36.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
36.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
36.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
35.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
35.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
35.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
35.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
34.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
34.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
34.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
34.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
34.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
34.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
34.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
33.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
33.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
33.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
32.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
32.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
32.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
32.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
32.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
32.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
31.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
31.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
31.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
31.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
30.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
30.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
30.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
30.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
29.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
29.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
29.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
29.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
29.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
28.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
28.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
28.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
28.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
27.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
27.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
27.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
27.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
27.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
27.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
27.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
27.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
27.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
27.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
27.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
27.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
27.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
26.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
26.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
26.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
26.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
26.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
26.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
26.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
26.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
26.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
26.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
26.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
26.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
26.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
25.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
25.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
25.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
25.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
25.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
25.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
25.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
25.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
25.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
25.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
24.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
24.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
24.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
24.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
24.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
24.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
24.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
24.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
24.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
24.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
24.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
24.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
23.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
23.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
23.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
23.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
23.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
23.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
23.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
23.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
23.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
23.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
23.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
23.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
23.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
22.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
22.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
22.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
22.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
22.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
22.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
22.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
22.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
22.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
22.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
22.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
22.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
22.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
22.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
22.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
22.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
22.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
22.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
22.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
22.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
22.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
22.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
21.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
21.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
21.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
21.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
21.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
21.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
21.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
21.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
21.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
21.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
21.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
21.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
21.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
21.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
21.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
21.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
21.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
20.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
20.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
20.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
20.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
20.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
20.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
20.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
20.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
20.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
20.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
20.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
20.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
20.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
20.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
20.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
20.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
20.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
20.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
20.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
19.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
19.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
19.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
19.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
19.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
19.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
19.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
19.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
19.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
19.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
19.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
19.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
19.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
19.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
19.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
19.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
19.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
19.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
19.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
19.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
18.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
18.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
18.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
18.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
18.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
18.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
18.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
18.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
18.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
18.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
18.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
18.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
18.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
18.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
18.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
18.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
17.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
17.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
17.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
17.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
17.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
17.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
17.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
17.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
17.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
17.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
17.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
17.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
17.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
17.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
17.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
17.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
17.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
17.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
17.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
17.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
17.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
16.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
16.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
16.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
16.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
16.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
16.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
16.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
16.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
16.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
16.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
16.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
16.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
16.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
16.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
16.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
15.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
15.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
15.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
15.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
15.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
15.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
15.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
15.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
15.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
15.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
15.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
15.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
15.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
15.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
14.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
14.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
14.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
14.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
14.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
14.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
14.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
13.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
13.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
13.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
13.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
13.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
13.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
13.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
13.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
13.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
13.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
13.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
12.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
12.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
12.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
12.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
12.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
12.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
11.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
11.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
11.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
11.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
11.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
10.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
10.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
10.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
10.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
10.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
10.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
9.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
9.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
8.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
8.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
7.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
7.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
7.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
6.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KPNA2 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
202.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
80.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
63.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
44.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
38.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
38.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
38.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
36.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
35.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
35.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
32.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
31.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
31.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
31.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
29.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
29.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
29.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
28.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
28.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
28.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
28.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
27.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
27.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
27.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
27.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
25.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
25.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
25.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
24.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
24.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
24.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
23.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
23.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
22.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
22.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
22.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
22.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
21.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
21.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
20.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
20.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
20.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
19.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
19.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
19.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
19.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
17.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
17.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
17.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
17.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
17.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
17.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
17.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
16.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
15.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
14.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
14.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
14.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
14.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
14.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
14.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
13.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
13.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
12.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
12.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
11.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
10.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
9.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
9.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
9.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
9.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KPNA2 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
116.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
86.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
77.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
76.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
72.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
72.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
63.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
56.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
53.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
53.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
52.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
50.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
47.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
45.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
44.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
40.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
39.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
39.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
39.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
38.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
38.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
37.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
37.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
36.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
35.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
34.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
34.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
34.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
32.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
32.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
32.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
32.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
31.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
30.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
30.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
29.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
29.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
28.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
28.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
27.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
27.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
27.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
27.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
27.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
27.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
27.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
26.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
25.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
25.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
24.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
24.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
24.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
24.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
23.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
23.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
23.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
23.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
23.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
23.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
23.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
22.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
22.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
22.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
22.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
22.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
22.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
21.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
21.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
21.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
21.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
21.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
21.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
21.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
21.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
21.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
21.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
20.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
20.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
20.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
20.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
20.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
20.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
20.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
20.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
20.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
20.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
19.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
19.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
19.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
19.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
19.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
18.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
18.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
18.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
18.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
18.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
18.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
18.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
17.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
17.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
17.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
17.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
17.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
16.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
16.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
16.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
16.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
16.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
16.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
16.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
16.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
15.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
15.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
15.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
15.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
15.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
15.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
15.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
15.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
15.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
14.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
14.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
14.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
14.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
14.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
14.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
14.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
14.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
14.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
13.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
13.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
13.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
13.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
13.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
13.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
13.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
13.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
13.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
12.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
12.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
12.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
11.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
11.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
11.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
11.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
11.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
10.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
9.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
9.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
8.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
8.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
8.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
8.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
8.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
7.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
7.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
7.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
7.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
7.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
7.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
5.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
5.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
5.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
5.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
4.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
4.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
4.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
4.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
4.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
4.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
3.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
3.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
2.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
2.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001260009
Tumor
1.3
CPT0012180003
Tumor
1.2
CPT0001340003
Tumor
1.1
CPT0069160003
Tumor
1.1
CPT0079410003
Tumor
1.0
CPT0075130003
Tumor
0.9
CPT0023350003
Tumor
0.9
CPT0017850003
Tumor
0.9
CPT0025290003
Tumor
0.9
CPT0092790003
Tumor
0.8
CPT0001180009
Tumor
0.7
CPT0078510003
Tumor
0.7
CPT0064370003
Tumor
0.6
CPT0081880003
Tumor
0.6
CPT0079380003
Tumor
0.6
CPT0075560003
Tumor
0.6
CPT0023690003
Tumor
0.6
CPT0021240003
Tumor
0.5
CPT0065690003
Tumor
0.5
CPT0066470004
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0078930003
Tumor
0.5
CPT0089460004
Tumor
0.5
CPT0001500009
Tumor
0.4
CPT0077310003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0001270001
Normal
0.4
CPT0065930003
Tumor
0.4
CPT0012280003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0017450001
Normal
0.3
CPT0092730003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0014160003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0088550004
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0086950003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0017410003
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0025880003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0075170001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0066480003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0013790003
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0026420001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0078830003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0079230003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0079430001
Normal
-0.3
CPT0086830003
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0009080003
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0000890001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0007870001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0088900003
Tumor
-0.3
CPT0025060001
Normal
-0.3
CPT0078990003
Tumor
-0.4
CPT0092310003
Normal
-0.4
CPT0077140001
Normal
-0.4
CPT0078670001
Normal
-0.4
CPT0012770003
Normal
-0.4
CPT0078660003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0001230001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0076350001
Normal
-0.4
CPT0006440003
Tumor
-0.5
CPT0079000001
Normal
-0.5
CPT0079270003
Tumor
-0.5
CPT0066520001
Normal
-0.5
CPT0092740003
Normal
-0.5
CPT0025920001
Normal
-0.5
CPT0006730001
Normal
-0.5
CPT0014350001
Normal
-0.6
CPT0019130003
Tumor
-0.6
CPT0000790001
Normal
-0.7
CPT0065450001
Normal
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
