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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KPNA2 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
214.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
202.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
175.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
174.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
171.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
166.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
144.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
141.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
138.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
127.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
107.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
101.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
100.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
96.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
94.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
94.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
92.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
89.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
88.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
87.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
83.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
83.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
82.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
82.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
80.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
80.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
79.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
78.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
77.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
76.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
76.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
76.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
74.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
72.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
71.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
70.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
69.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
66.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
65.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
65.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
65.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
64.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
64.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
64.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
63.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
62.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
61.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
61.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
61.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
60.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
60.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
59.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
58.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
58.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
58.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
58.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
57.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
57.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
56.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
56.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
56.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
56.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
55.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
55.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
55.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
54.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
54.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
54.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
54.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
53.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
52.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
52.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
51.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
50.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
50.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
49.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
49.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
49.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
48.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
48.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
47.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
46.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
45.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
45.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
45.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
45.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
43.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
43.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
43.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
42.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
42.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
42.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
42.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
41.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
41.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
41.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
41.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
41.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
41.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
40.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
40.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
40.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
40.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
39.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
39.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
39.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
39.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
39.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
38.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
38.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
38.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
37.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
37.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
37.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
37.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
37.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
37.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
37.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
36.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
36.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
36.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
36.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
36.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
36.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
36.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
35.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
34.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
34.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
34.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
34.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
34.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
33.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
33.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
33.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
32.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
32.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
32.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
32.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
31.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
31.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
31.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
31.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
31.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
31.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
31.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
30.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
30.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
30.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
30.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
30.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
30.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
30.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
29.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
29.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
29.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
28.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
28.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
28.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
28.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
28.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
28.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
28.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
28.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
28.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
27.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
27.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
27.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
27.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
27.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
27.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
27.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
26.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
26.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
26.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
26.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
26.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
25.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
25.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
25.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
25.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
25.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
25.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
25.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
25.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
25.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
24.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
24.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
24.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
24.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
24.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
24.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
24.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
24.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
24.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
23.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
23.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
23.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
23.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
22.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
22.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
22.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
22.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
22.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
22.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
21.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
21.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
21.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
21.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
21.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
21.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
21.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
21.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
21.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
21.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
20.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
20.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
20.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
20.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
20.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
20.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
20.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
20.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
20.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
20.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
20.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
20.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
19.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
19.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
19.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
19.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
19.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
19.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
19.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
19.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
19.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
18.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
18.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
18.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
18.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
18.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
18.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
18.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
18.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
18.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
18.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
18.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
18.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
17.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
17.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
17.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
17.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
17.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
17.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
17.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
17.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
17.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
17.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
17.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
16.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
16.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
16.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
16.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
16.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
16.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
16.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
16.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
16.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
16.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
16.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
16.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
15.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
15.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
15.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
15.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
15.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
15.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
15.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
15.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
15.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
15.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
15.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
14.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
14.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
14.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
14.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
14.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
14.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
14.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
14.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
14.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
14.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
14.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
14.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
14.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
13.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
13.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
13.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
13.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
13.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
13.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
12.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
12.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
12.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
12.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
12.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
12.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
12.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
11.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
11.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
11.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
11.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
11.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
11.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
11.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
10.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
10.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
10.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
10.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
10.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
10.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
10.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
9.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
9.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
9.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
9.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
9.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
9.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
9.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
9.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
8.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
8.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
8.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
8.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
7.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
7.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
7.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
7.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
7.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
6.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
6.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
6.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
6.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
6.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
5.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KPNA2 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.1
Number of samples
231
Samples
Sample
Description
TPM
DO45161
0 years, male, NA, stage:2, dead, 540 days
334.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
189.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
153.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
135.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
122.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
101.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
99.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
94.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
94.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
90.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
87.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
86.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
80.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
78.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
78.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
75.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
75.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
74.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
72.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
72.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
68.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
67.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
67.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
67.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
65.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
64.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
61.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
61.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
59.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
59.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
59.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
58.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
58.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
58.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
58.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
58.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
57.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
56.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
56.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
56.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
55.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
54.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
53.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
53.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
51.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
51.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
50.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
49.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
47.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
47.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
46.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
46.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
45.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
45.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
45.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
44.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
42.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
42.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
42.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
41.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
41.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
41.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
40.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
40.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
40.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
39.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
39.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
39.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
39.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
39.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
39.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
39.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
39.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
38.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
37.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
37.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
37.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
37.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
36.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
36.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
36.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
36.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
35.5
DO50820
0 years, female, NA, stage:3, alive, 510 days
35.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
34.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
34.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
34.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
34.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
33.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
33.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
32.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
32.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
31.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
31.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
31.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
31.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
31.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
31.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
29.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
29.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
29.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
29.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
29.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
28.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
28.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
28.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
28.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
28.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
28.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
28.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
28.2
DO50825
0 years, male, NA, stage:2, alive, 390 days
28.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
28.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
28.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
27.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
26.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
26.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
26.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
26.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
26.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
26.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
25.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
25.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
25.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
24.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
24.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
24.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
24.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
23.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
23.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
23.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
23.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
23.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
23.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
22.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
22.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
22.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
22.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
22.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
21.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
21.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
21.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
21.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
21.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
21.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
21.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
21.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
21.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
21.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
20.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
20.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
20.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
20.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
19.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
19.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
19.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
19.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
19.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
19.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
19.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
18.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
18.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
18.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
18.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
17.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
17.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
17.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
17.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
17.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
17.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
17.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
17.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
16.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
16.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
16.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
16.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
15.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
15.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
15.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
15.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
15.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
14.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
14.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
14.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
14.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
14.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
14.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
14.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
13.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
13.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
13.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
13.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
13.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
12.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
12.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
12.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
12.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
12.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
11.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
11.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
11.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
10.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
10.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
9.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
9.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
9.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
8.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
8.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
8.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
8.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
7.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
7.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
6.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
5.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
4.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
3.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
533
Tumor
1.8
661
Tumor
1.8
525
Tumor
1.7
367
Tumor
1.7
537
Tumor
1.7
957
Tumor
1.6
965
Tumor
1.6
351
Tumor
1.6
463
Tumor
1.3
435
Tumor
1.3
387
Tumor
1.3
357
Tumor
1.2
865
Tumor
1.1
497
Tumor
1.1
983
Tumor
1.0
953
Tumor
1.0
257
Tumor
1.0
573
Tumor
1.0
331
Tumor
1.0
745
Tumor
1.0
385
Tumor
1.0
123
Tumor
1.0
391
Tumor
0.9
375
Tumor
0.9
313
Tumor
0.9
427
Tumor
0.8
283
Tumor
0.8
567
Tumor
0.8
951
Tumor
0.8
411
Tumor
0.8
413
Tumor
0.8
277
Tumor
0.7
311
Tumor
0.7
285
Tumor
0.7
1013
Tumor
0.6
211
Tumor
0.6
493
Tumor
0.6
663
Tumor
0.6
125
Tumor
0.6
535
Tumor
0.6
213
Tumor
0.5
433
Tumor
0.5
724
Normal
0.5
727
Tumor
0.5
227
Tumor
0.5
943
Tumor
0.5
161
Tumor
0.5
635
Tumor
0.5
665
Tumor
0.5
671
Tumor
0.4
425
Tumor
0.4
127
Tumor
0.4
297
Tumor
0.4
341
Tumor
0.4
923
Tumor
0.4
171
Tumor
0.4
343
Tumor
0.4
1027
Tumor
0.4
743
Tumor
0.4
267
Tumor
0.3
647
Tumor
0.3
527
Tumor
0.3
187
Tumor
0.3
817
Tumor
0.3
967
Tumor
0.3
421
Tumor
0.3
883
Tumor
0.3
355
Tumor
0.3
697
Tumor
0.3
147
Tumor
0.3
473
Tumor
0.3
1021
Tumor
0.2
443
Tumor
0.2
815
Tumor
0.2
185
Tumor
0.2
393
Tumor
0.2
447
Tumor
0.1
851
Tumor
0.1
361
Tumor
0.1
477
Tumor
0.1
467
Tumor
0.1
574
Normal
0.1
314
Normal
0.0
217
Tumor
0.0
113
Tumor
0.0
641
Tumor
0.0
713
Tumor
0.0
231
Tumor
0.0
545
Tumor
0.0
517
Tumor
0.0
737
Tumor
-0.1
383
Tumor
-0.1
877
Tumor
-0.1
461
Tumor
-0.1
135
Tumor
-0.1
455
Tumor
-0.1
368
Normal
-0.1
491
Tumor
-0.1
137
Tumor
-0.1
141
Tumor
-0.1
353
Tumor
-0.1
271
Tumor
-0.1
917
Tumor
-0.1
741
Tumor
-0.2
523
Tumor
-0.2
814
Normal
-0.2
388
Normal
-0.2
1031
Tumor
-0.2
571
Tumor
-0.2
112
Tumor
-0.2
861
Tumor
-0.2
445
Tumor
-0.2
483
Tumor
-0.2
487
Tumor
-0.2
975
Tumor
-0.2
823
Tumor
-0.2
685
Tumor
-0.2
813
Tumor
-0.2
963
Tumor
-0.2
332
Normal
-0.2
925
Tumor
-0.2
446
Normal
-0.2
568
Normal
-0.2
423
Tumor
-0.2
1015
Tumor
-0.3
365
Tumor
-0.3
394
Normal
-0.3
436
Normal
-0.3
564
Normal
-0.3
131
Tumor
-0.3
395
Tumor
-0.3
386
Normal
-0.3
191
Tumor
-0.3
258
Normal
-0.3
138
Normal
-0.3
755
Tumor
-0.3
534
Normal
-0.3
434
Normal
-0.3
563
Tumor
-0.3
223
Tumor
-0.3
913
Tumor
-0.3
1025
Tumor
-0.3
857
Tumor
-0.3
964
Normal
-0.3
376
Normal
-0.3
145
Tumor
-0.3
284
Normal
-0.3
538
Normal
-0.3
396
Normal
-0.3
873
Tumor
-0.3
937
Tumor
-0.4
392
Normal
-0.4
232
Normal
-0.4
976
Normal
-0.4
966
Normal
-0.4
881
Tumor
-0.4
1043
Tumor
-0.4
422
Normal
-0.4
981
Tumor
-0.4
977
Tumor
-0.4
384
Normal
-0.4
352
Normal
-0.4
432
Normal
-0.4
444
Normal
-0.4
557
Tumor
-0.4
662
Normal
-0.4
431
Tumor
-0.4
221
Tumor
-0.4
978
Normal
-0.4
1016
Normal
-0.4
426
Normal
-0.4
428
Normal
-0.4
615
Tumor
-0.4
465
Tumor
-0.4
114
Normal
-0.4
471
Tumor
-0.4
1046
Normal
-0.4
451
Tumor
-0.4
362
Normal
-0.4
528
Normal
-0.4
695
Tumor
-0.5
298
Normal
-0.5
312
Normal
-0.5
416
Normal
-0.5
327
Tumor
-0.5
262
Normal
-0.5
424
Normal
-0.5
224
Normal
-0.5
698
Normal
-0.5
617
Tumor
-0.5
228
Normal
-0.5
132
Normal
-0.5
553
Tumor
-0.5
278
Normal
-0.5
414
Normal
-0.5
984
Normal
-0.5
356
Normal
-0.5
128
Normal
-0.5
195
Tumor
-0.5
982
Normal
-0.5
363
Tumor
-0.5
777
Tumor
-0.5
921
Tumor
-0.5
126
Normal
-0.5
526
Normal
-0.5
366
Normal
-0.5
1014
Normal
-0.5
721
Tumor
-0.5
364
Normal
-0.5
136
Normal
-0.5
666
Normal
-0.5
914
Normal
-0.6
286
Normal
-0.6
558
Normal
-0.6
968
Normal
-0.6
1045
Tumor
-0.6
536
Normal
-0.6
142
Normal
-0.6
513
Tumor
-0.6
268
Normal
-0.6
124
Normal
-0.6
212
Normal
-0.6
358
Normal
-0.6
926
Normal
-0.6
572
Normal
-0.6
468
Normal
-0.6
716
Normal
-0.6
642
Normal
-0.6
188
Normal
-0.6
172
Normal
-0.6
672
Normal
-0.6
415
Tumor
-0.6
546
Normal
-0.6
958
Normal
-0.6
261
Tumor
-0.6
412
Normal
-0.6
328
Normal
-0.6
922
Normal
-0.6
515
Tumor
-0.6
464
Normal
-0.6
627
Tumor
-0.6
111
Normal
-0.7
722
Normal
-0.7
1042
Normal
-0.7
916
Normal
-0.7
146
Normal
-0.7
786
Normal
-0.7
456
Normal
-0.7
344
Normal
-0.7
214
Normal
-0.7
472
Normal
-0.7
482
Normal
-0.7
924
Normal
-0.7
1026
Normal
-0.7
481
Tumor
-0.7
554
Normal
-0.7
1044
Normal
-0.7
272
Normal
-0.7
858
Normal
-0.7
664
Normal
-0.8
448
Normal
-0.8
648
Normal
-0.8
342
Normal
-0.8
911
Tumor
-0.8
498
Normal
-0.8
474
Normal
-0.8
636
Normal
-0.8
756
Normal
-0.8
1041
Tumor
-0.8
884
Normal
-0.8
218
Normal
-0.8
186
Normal
-0.8
354
Normal
-0.8
524
Normal
-0.8
912
Normal
-0.8
196
Normal
-0.8
466
Normal
-0.8
715
Tumor
-0.8
514
Normal
-0.8
162
Normal
-0.8
148
Normal
-0.8
866
Normal
-0.8
628
Normal
-0.8
462
Normal
-0.8
882
Normal
-0.8
955
Tumor
-0.8
478
Normal
-0.8
518
Normal
-0.9
956
Normal
-0.9
696
Normal
-0.9
816
Normal
-0.9
878
Normal
-0.9
863
Tumor
-0.9
616
Normal
-0.9
516
Normal
-0.9
714
Normal
-0.9
862
Normal
-0.9
918
Normal
-0.9
1028
Normal
-0.9
686
Normal
-0.9
785
Tumor
-0.9
222
Normal
-0.9
874
Normal
-1.0
728
Normal
-1.0
954
Normal
-1.0
723
Tumor
-1.0
452
Normal
-1.0
944
Normal
-1.0
778
Normal
-1.0
852
Normal
-1.0
868
Normal
-1.0
618
Normal
-1.0
864
Normal
-1.0
492
Normal
-1.0
952
Normal
-1.0
192
Normal
-1.0
824
Normal
-1.0
938
Normal
-1.0
488
Normal
-1.0
867
Tumor
-1.1
744
Normal
-1.1
915
Tumor
-1.1
494
Normal
-1.1
1032
Normal
-1.1
1022
Normal
-1.1
738
Normal
-1.1
818
Normal
-1.1
484
Normal
-1.2
742
Normal
-1.2
746
Normal
-1.2
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
