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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IST1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
81.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
81.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
77.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
77.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
76.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
73.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
73.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
72.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
71.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
69.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
67.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
66.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
62.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
62.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
60.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
58.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
56.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
53.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
53.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
51.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
51.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
51.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
49.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
48.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
47.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
47.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
47.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
45.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
44.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
43.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
42.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
42.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
41.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
40.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
39.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
38.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
37.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
36.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
35.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
35.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
35.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
34.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
34.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
33.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
33.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
32.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
31.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
28.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
24.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
23.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
22.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
19.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
19.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
18.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
17.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
16.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
12.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
6.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
6.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IST1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
130.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
129.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
122.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
120.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
112.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
111.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
109.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
107.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
107.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
106.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
101.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
100.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
100.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
100.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
98.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
98.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
97.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
97.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
96.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
96.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
95.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
94.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
93.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
93.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
93.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
91.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
91.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
89.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
88.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
88.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
88.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
88.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
87.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
87.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
87.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
87.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
87.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
86.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
86.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
86.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
86.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
86.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
85.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
85.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
85.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
84.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
84.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
84.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
84.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
84.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
84.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
84.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
84.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
83.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
83.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
83.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
83.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
82.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
82.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
82.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
82.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
82.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
82.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
81.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
81.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
81.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
81.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
81.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
81.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
81.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
81.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
80.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
80.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
80.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
80.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
80.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
80.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
79.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
79.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
79.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
79.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
79.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
78.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
78.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
78.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
78.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
78.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
78.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
77.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
77.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
77.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
77.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
77.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
77.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
77.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
77.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
77.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
76.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
76.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
76.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
76.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
76.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
75.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
75.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
75.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
74.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
74.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
74.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
74.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
74.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
73.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
73.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
73.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
73.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
73.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
73.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
73.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
73.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
73.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
73.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
73.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
72.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
72.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
71.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
71.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
71.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
71.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
71.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
71.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
71.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
71.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
70.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
70.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
70.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
70.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
70.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
70.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
70.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
70.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
70.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
69.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
69.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
69.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
69.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
69.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
69.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
69.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
69.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
69.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
69.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
69.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
68.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
68.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
68.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
68.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
68.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
68.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
68.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
67.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
67.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
67.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
67.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
67.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
67.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
67.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
67.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
66.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
66.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
66.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
66.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
66.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
65.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
65.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
65.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
65.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
65.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
64.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
64.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
64.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
64.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
64.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
63.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
63.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
63.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
62.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
62.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
62.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
62.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
62.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
62.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
62.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
62.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
61.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
61.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
61.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
61.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
61.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
61.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
60.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
60.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
60.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
60.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
60.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
60.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
59.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
59.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
59.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
59.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
59.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
59.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
59.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
59.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
58.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
58.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
58.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
58.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
58.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
58.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
58.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
58.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
58.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
57.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
57.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
57.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
57.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
57.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
57.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
57.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
56.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
56.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
56.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
56.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
56.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
56.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
56.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
56.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
56.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
56.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
56.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
56.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
56.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
56.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
55.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
55.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
55.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
55.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
55.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
55.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
55.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
55.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
54.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
54.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
54.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
54.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
54.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
54.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
54.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
54.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
54.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
54.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
54.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
53.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
53.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
53.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
53.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
53.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
53.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
53.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
53.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
53.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
52.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
52.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
52.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
52.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
52.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
52.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
52.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
52.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
52.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
52.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
51.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
51.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
51.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
51.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
51.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
50.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
50.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
50.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
50.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
50.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
50.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
50.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
50.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
49.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
49.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
49.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
49.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
49.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
49.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
49.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
49.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
49.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
49.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
48.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
48.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
48.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
48.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
48.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
48.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
48.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
48.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
48.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
48.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
48.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
48.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
47.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
47.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
47.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
47.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
47.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
47.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
47.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
47.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
46.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
46.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
46.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
46.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
46.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
45.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
45.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
45.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
45.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
45.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
45.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
45.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
45.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
44.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
44.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
44.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
44.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
44.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
44.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
44.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
44.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
44.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
44.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
44.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
43.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
43.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
43.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
43.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
43.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
43.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
43.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
42.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
42.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
42.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
42.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
42.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
42.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
41.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
41.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
41.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
41.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
41.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
41.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
40.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
40.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
40.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
40.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
40.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
40.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
39.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
39.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
39.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
39.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
38.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
38.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
38.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
38.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
38.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
38.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
38.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
38.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
38.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
37.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
37.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
37.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
37.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
37.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
37.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
37.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
37.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
36.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
36.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
36.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
36.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
36.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
35.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
35.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
35.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
35.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
35.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
35.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
34.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
34.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
34.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
34.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
34.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
34.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
34.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
34.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
33.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
33.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
33.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
32.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
32.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
32.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
32.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
32.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
31.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
31.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
30.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
30.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
30.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
30.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
30.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
30.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
29.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
29.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
29.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
29.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
29.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
29.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
29.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
28.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
28.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
27.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
27.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
27.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
27.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
27.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
27.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
26.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
26.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
26.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
26.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
26.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
26.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
26.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
26.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
26.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
25.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
25.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
25.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
24.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
24.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
24.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
24.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
24.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
23.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
23.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
22.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
22.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
22.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
22.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
22.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
22.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
22.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
21.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
21.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
21.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
21.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
21.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
20.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
20.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
20.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
20.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
20.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
20.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
20.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
18.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
18.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
18.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
18.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
17.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
17.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
16.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
16.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
14.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
12.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
10.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
7.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IST1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
87.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
83.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
80.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
80.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
79.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
79.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
78.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
77.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
76.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
75.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
74.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
73.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
73.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
73.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
72.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
72.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
70.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
70.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
70.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
69.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
69.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
66.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
65.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
65.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
65.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
64.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
63.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
61.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
61.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
60.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
60.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
59.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
59.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
58.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
57.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
56.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
55.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
55.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
55.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
54.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
54.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
54.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
53.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
53.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
53.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
52.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
52.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
51.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
51.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
51.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
50.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
50.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
49.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
49.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
49.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
48.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
48.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
48.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
47.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
46.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
45.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
44.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
44.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
44.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
44.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
44.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
43.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
41.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
41.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
40.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
40.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
40.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
39.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
39.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
39.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
38.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
37.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
37.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
37.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
37.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
37.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
36.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
36.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
34.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
34.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
33.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
32.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
32.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
32.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
31.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
30.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
30.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
29.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
28.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
27.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
27.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
27.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IST1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
159.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
143.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
141.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
133.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
130.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
127.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
127.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
126.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
125.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
115.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
115.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
114.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
106.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
102.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
100.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
99.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
99.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
99.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
98.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
97.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
97.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
97.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
96.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
95.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
94.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
94.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
93.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
93.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
92.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
92.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
91.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
90.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
90.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
89.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
89.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
88.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
88.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
87.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
87.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
86.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
86.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
85.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
85.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
85.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
84.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
83.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
83.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
82.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
82.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
82.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
82.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
81.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
81.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
80.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
80.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
80.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
80.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
79.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
79.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
78.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
78.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
77.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
77.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
76.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
76.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
76.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
76.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
75.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
75.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
74.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
74.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
73.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
73.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
72.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
72.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
70.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
70.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
70.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
70.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
70.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
69.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
69.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
68.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
67.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
67.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
67.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
67.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
66.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
66.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
66.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
65.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
65.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
64.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
64.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
64.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
63.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
63.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
63.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
63.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
63.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
62.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
62.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
62.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
62.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
62.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
61.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
61.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
61.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
60.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
60.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
59.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
59.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
59.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
59.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
58.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
57.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
57.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
57.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
57.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
57.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
56.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
56.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
56.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
55.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
55.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
55.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
54.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
54.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
53.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
53.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
53.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
53.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
53.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
53.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
52.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
52.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
52.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
52.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
52.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
51.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
51.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
51.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
51.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
50.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
50.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
50.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
50.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
49.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
49.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
49.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
49.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
49.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
49.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
49.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
48.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
48.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
48.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
47.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
47.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
47.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
47.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
46.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
46.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
46.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
45.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
45.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
45.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
45.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
44.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
44.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
44.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
43.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
43.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
43.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
42.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
42.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
42.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
41.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
41.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
40.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
40.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
40.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
40.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
40.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
39.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
39.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
38.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
38.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
37.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
37.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
37.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
37.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
37.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
37.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
36.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
36.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
35.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
35.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
34.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
34.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
34.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
33.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
33.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
33.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
32.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
32.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
32.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
31.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
31.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
31.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
30.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
30.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
30.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
29.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
29.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
29.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
29.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
29.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
28.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
28.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
28.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
28.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
27.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
26.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
26.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
25.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
24.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
24.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
23.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
23.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
23.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
22.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
22.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
22.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
22.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
21.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
20.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
19.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
19.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
19.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
19.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
18.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
18.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
18.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
17.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
17.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
16.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
16.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
15.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
14.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
14.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
13.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
13.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
13.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
12.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
12.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
11.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
10.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
8.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
6.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
4.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0024680001
Normal
1.0
CPT0078660003
Tumor
0.9
CPT0078800003
Tumor
0.6
CPT0012290003
Normal
0.6
CPT0010120001
Normal
0.5
CPT0077500001
Normal
0.5
CPT0018250001
Normal
0.4
CPT0001340003
Tumor
0.4
CPT0066520001
Normal
0.4
CPT0092800003
Normal
0.4
CPT0002270011
Tumor
0.4
CPT0009020003
Normal
0.4
CPT0079230003
Tumor
0.4
CPT0009080003
Normal
0.4
CPT0012640003
Normal
0.4
CPT0012920003
Normal
0.3
CPT0065820001
Normal
0.3
CPT0079180003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0063330001
Normal
0.3
CPT0065810003
Tumor
0.3
CPT0001510001
Normal
0.3
CPT0012280003
Tumor
0.3
CPT0011410003
Tumor
0.2
CPT0020130001
Normal
0.2
CPT0002370001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0076330003
Tumor
0.2
CPT0082010001
Normal
0.2
CPT0012090003
Normal
0.2
CPT0077140001
Normal
0.2
CPT0092190003
Normal
0.2
CPT0065450001
Normal
0.2
CPT0078510003
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0006950001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0086820003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0069190001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0086370003
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0075570001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0012770003
Normal
0.1
CPT0088550004
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0075170001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0009060003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0078670001
Normal
0.1
CPT0015730003
Tumor
0.1
CPT0079510001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0001350001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0077320001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0000640003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0081880003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0065750003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0001260009
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0087040003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0012180003
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0012670003
Tumor
-0.4
CPT0077310003
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0088690003
Tumor
-0.5
CPT0086950003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
