HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:23.7 nTPM
HPA Brain:29.6 nTPM
GTEx:23.7 nTPM
FANTOM5:70.4 Scaled Tags Per Million
Pig:9.9 nTPM
Mouse:55.4 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023453
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 29.6
Sample id Sample description nTPM
Hippocampus
nTPM: 26.1
1898 Male, age 80, left hemisphere 34.8
2621 Female, age 67, right hemisphere 27.9
2148 Female, age 91, left hemisphere 26.8
1911 Female, age 85, right hemisphere 25.3
1855 Male, age 76, left hemisphere 21.8
2529 Female, age 94, left hemisphere 20.3
Dentate gyrus
nTPM: 27.3
1927 Female, age 91, both hemispheres 35.3
2010 Male, age 76, both hemispheres 30.9
2530 Female, age 94, left hemisphere 29.6
2528 Male, age 74, both hemispheres 26.0
2246 Female, age 85, both hemispheres 22.0
2531 Female, age 67, both hemispheres 20.1
Entorhinal gyrus
nTPM: 24.9
2764 Male, age 80, right hemisphere 31.4
1938 Female, age 85, left hemisphere 28.8
2117 Female, age 91, right hemisphere 24.7
1787 Male, age 76, left hemisphere 23.5
2613 Female, age 94, left hemisphere 21.5
2686 Male, age 75, right hemisphere 19.2
Hippocampus, CA1
nTPM: 29.6
2749 Male, age 80, left hemisphere 41.3
1873 Female, age 85, both hemispheres 31.5
2045 Male, age 76, both hemispheres 27.9
2527 Male, age 74, both hemispheres 24.1
2082 Female, age 91, right hemisphere 23.1
Hippocampus, CA2
nTPM: 28.8
1963 Male, age 80, left hemisphere 36.9
1892 Male, age 76, both hemispheres 34.6
2249 Male, age 74, both hemispheres 29.4
1940 Female, age 85, left hemisphere 24.4
2437 Female, age 94, left hemisphere 24.2
2113 Female, age 91, right hemisphere 23.4
Hippocampus, CA3
nTPM: 27.3
2137 Male, age 80, left hemisphere 34.6
1867 Male, age 76, both hemispheres 30.6
1891 Female, age 85, both hemispheres 27.5
2620 Female, age 94, left hemisphere 26.6
2436 Male, age 74, both hemispheres 23.1
2861 Female, age 67, both hemispheres 21.2
Parahippocampal cortex
nTPM: 25.9
1933 Female, age 85, both hemispheres 32.5
1850 Male, age 80, both hemispheres 30.7
2250 Female, age 67, right hemisphere 27.9
1990 Female, age 91, right hemisphere 27.4
2018 Male, age 76, both hemispheres 26.8
2245 Female, age 91, both hemispheres 25.1
2692 Male, age 74, both hemispheres 24.0
2532 Female, age 72, left hemisphere 22.4
2693 Female, age 94, both hemispheres 22.1
2622 Female, age 67, right hemisphere 20.1
Perirhinal gyrus
nTPM: 27.5
1847 Female, age 91, left hemisphere 35.7
1794 Male, age 80, right hemisphere 29.9
1841 Female, age 85, right hemisphere 29.5
2848 Male, age 76, right hemisphere 22.7
2521 Female, age 94, right hemisphere 19.6
Subiculum
nTPM: 24.9
1977 Female, age 85, both hemispheres 29.3
1901 Male, age 80, both hemispheres 28.3
2042 Male, age 76, both hemispheres 24.9
2729 Female, age 91, right hemisphere 23.3
2619 Male, age 74, both hemispheres 23.0
2438 Female, age 94, left hemisphere 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 23.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.7
Samples: 197

Max nTPM: 45.1
Min nTPM: 9.9
Std nTPM: 7.4
Median nTPM: 21.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 45.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 41.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 40.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 40.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 40.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 39.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 38.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 38.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 37.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 37.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 70.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.4
FF:10169-103B7 60 years, female 91.3
FF:10153-102I9 76 years, female 49.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 9.9
Pig sample Sample description nTPM
Subiculum
nTPM: 8.5
Samples: 4

Max nTPM: 9.2
Min nTPM: 7.9
Sample A Female 8.3
Sample B Female 9.2
Sample C Male 8.4
Sample D Male 7.9
Dorsal hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 10.6
Min nTPM: 9.4
Sample A Female 9.9
Sample B Female 9.8
Sample C Male 9.4
Sample D Male 10.6
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 9.5
Min nTPM: 8.0
Sample A Female 9.5
Sample B Female 9.0
Sample C Male 8.0
Sample D Male 8.9
Ventral hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 9.3
Min nTPM: 8.7
Sample A Female 8.7
Sample B Female 9.2
Sample C Male 9.0
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 55.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.1
Samples: 4

Max nTPM: 56.0
Min nTPM: 45.3
Sample A Male 50.6
Sample B Male 52.4
Sample C Female 56.0
Sample D Female 45.3
Hippocampal formation
nTPM: 55.4
Samples: 4

Max nTPM: 70.2
Min nTPM: 46.3
Sample A Male 70.2
Sample B Male 54.7
Sample C Female 46.3
Sample D Female 50.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
638706 Antisense, RP_040831_02_C04, Mouse strain C57BL/6J (56 days, male) 2.4

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