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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DCTPP1 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
125.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
118.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
93.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
80.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
79.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
75.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
72.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
68.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
68.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
67.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
66.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
65.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
62.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
59.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
58.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
57.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
56.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
55.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
55.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
54.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
53.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
53.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
53.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
53.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
52.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
51.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
50.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
49.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
48.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
48.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
47.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
47.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
46.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
46.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
46.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
45.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
44.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
43.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
43.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
41.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
41.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
41.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
40.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
40.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
40.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
39.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
39.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
39.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
39.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
39.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
39.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
38.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
38.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
38.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
38.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
38.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
37.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
37.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
37.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
37.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
37.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
37.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
37.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
36.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
35.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
35.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
35.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
35.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
35.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
35.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
35.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
34.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
34.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
34.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
34.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
34.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
34.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
34.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
33.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
33.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
33.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
33.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
33.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
32.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
32.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
32.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
32.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
32.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
32.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
32.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
31.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
31.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
31.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
31.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
31.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
31.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
31.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
30.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
30.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
30.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
30.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
30.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
30.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
30.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
29.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
29.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
29.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
29.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
29.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
28.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
28.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
28.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
28.7
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
28.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
28.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
28.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
28.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
28.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
28.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
28.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
28.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
27.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
27.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
27.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
27.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
27.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
27.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
27.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
26.9
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
26.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
26.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
26.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
25.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
25.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
25.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
25.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
25.6
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
25.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
25.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
25.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
25.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
25.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
25.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
25.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
25.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
25.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
24.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
24.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
24.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
24.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
24.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
24.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
24.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
23.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
23.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
23.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
23.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
23.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
23.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
23.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
23.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
23.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
23.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
22.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
22.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
22.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
22.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
22.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
22.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
22.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
22.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
22.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
22.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
22.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
22.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
22.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
22.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
22.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
21.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
21.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
21.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
21.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
21.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
21.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
21.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
21.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
21.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
21.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
21.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
21.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
21.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
20.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
20.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
20.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
20.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
20.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
20.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
20.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
20.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
20.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
20.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
20.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
20.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
20.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
20.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
20.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
20.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
20.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
19.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
19.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
19.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
19.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
19.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
19.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
19.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
19.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
19.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
19.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
19.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
19.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
19.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
19.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
19.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
19.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
19.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
19.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
18.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
18.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
18.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
18.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
18.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
18.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
18.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
18.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
18.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
18.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
18.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
18.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
18.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
18.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
18.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
18.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
18.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
18.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
18.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
17.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
17.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
17.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
17.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
17.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
17.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
17.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
17.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
17.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
17.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
17.2
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
17.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
17.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
17.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
17.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
16.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
16.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
16.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
16.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
16.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
16.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
16.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
16.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
16.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
16.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
16.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
16.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
16.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
16.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
15.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
15.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
15.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
15.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
15.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
15.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
15.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
15.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
15.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
15.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
15.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
15.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
15.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
15.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
14.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
14.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
14.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
14.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
14.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
14.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
14.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
14.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
14.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
14.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
14.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
14.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
14.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
14.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
14.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
14.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
14.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
14.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
14.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
14.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
13.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
13.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
13.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
13.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
13.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
13.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
13.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
13.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
12.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
12.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
12.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
12.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
12.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
12.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
12.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
12.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
12.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
12.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
11.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
11.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
11.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
11.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
11.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
11.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
11.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
11.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
11.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
11.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
11.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
11.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
10.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
10.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
10.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
10.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
10.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
10.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
9.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
9.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
9.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
8.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
8.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
8.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
8.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
8.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
7.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DCTPP1 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.9
Number of samples
231
Samples
Sample
Description
TPM
DO45299
0 years, female, NA, stage:1, alive, 1440 days
86.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
78.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
71.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
64.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
56.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
55.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
55.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
54.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
54.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
52.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
50.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
49.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
47.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
46.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
44.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
43.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
41.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
39.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
38.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
37.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
34.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
34.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
33.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
32.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
32.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
31.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
31.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
30.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
30.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
30.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
29.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
29.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
28.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
26.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
26.3
DO45249
0 years, male, NA, stage:1, alive, 630 days
25.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
25.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
25.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
24.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
24.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
24.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
24.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
24.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
24.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
23.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
23.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
23.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
23.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
22.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
22.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
22.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
22.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
22.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
22.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
22.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
21.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
21.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
21.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
21.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
21.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
21.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
21.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
21.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
21.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
20.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
20.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
20.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
19.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
19.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
19.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
19.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
19.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
19.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
19.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
19.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
18.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
18.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
18.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
18.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
18.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
17.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
17.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
17.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
17.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
17.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
17.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
16.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
16.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
16.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
16.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
16.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
16.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
15.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
15.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
15.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
15.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
15.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
15.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
15.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
15.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
15.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
14.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
14.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
14.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
14.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
14.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
14.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
14.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
14.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
14.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
14.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
13.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
13.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
13.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
13.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
13.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
13.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
13.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
13.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
12.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
12.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
12.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
12.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
12.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
12.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
12.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
12.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
12.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
12.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
12.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
12.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
12.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
12.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
12.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
12.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
12.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
12.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
12.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
11.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
11.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
11.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
11.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
11.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
11.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
11.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
11.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
11.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
11.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
11.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
11.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
11.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
11.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
11.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
10.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
10.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
10.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
10.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
10.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
10.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
10.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
10.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
10.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
10.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
10.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
10.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
10.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
10.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
10.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
9.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
9.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
9.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
9.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
9.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
8.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
8.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
8.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
8.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
8.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
8.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
8.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
8.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
7.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
7.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
6.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
6.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
6.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
6.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
6.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
6.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
6.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
6.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
6.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
5.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
5.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
5.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
5.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
5.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
5.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
4.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
4.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
4.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
3.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
3.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
3.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
1.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
817
Tumor
2.5
685
Tumor
2.1
465
Tumor
2.1
1013
Tumor
2.0
571
Tumor
2.0
357
Tumor
1.6
695
Tumor
1.6
663
Tumor
1.5
351
Tumor
1.4
925
Tumor
1.4
1027
Tumor
1.3
965
Tumor
1.3
413
Tumor
1.3
641
Tumor
1.3
527
Tumor
1.2
391
Tumor
1.2
1021
Tumor
1.2
297
Tumor
1.2
435
Tumor
1.2
697
Tumor
1.2
411
Tumor
1.1
123
Tumor
1.1
211
Tumor
1.1
647
Tumor
1.1
635
Tumor
1.0
497
Tumor
1.0
395
Tumor
1.0
171
Tumor
0.9
967
Tumor
0.9
331
Tumor
0.9
883
Tumor
0.9
313
Tumor
0.9
813
Tumor
0.9
231
Tumor
0.9
963
Tumor
0.8
387
Tumor
0.8
923
Tumor
0.8
355
Tumor
0.8
873
Tumor
0.8
427
Tumor
0.8
267
Tumor
0.8
814
Normal
0.7
724
Normal
0.7
661
Tumor
0.7
917
Tumor
0.7
161
Tumor
0.7
943
Tumor
0.6
311
Tumor
0.6
477
Tumor
0.6
493
Tumor
0.6
983
Tumor
0.6
127
Tumor
0.6
137
Tumor
0.5
741
Tumor
0.5
545
Tumor
0.5
341
Tumor
0.5
573
Tumor
0.5
423
Tumor
0.5
361
Tumor
0.5
393
Tumor
0.5
937
Tumor
0.5
557
Tumor
0.4
525
Tumor
0.4
533
Tumor
0.4
185
Tumor
0.4
487
Tumor
0.4
277
Tumor
0.4
383
Tumor
0.4
343
Tumor
0.3
977
Tumor
0.3
615
Tumor
0.3
367
Tumor
0.3
483
Tumor
0.3
1045
Tumor
0.3
513
Tumor
0.3
433
Tumor
0.3
385
Tumor
0.2
665
Tumor
0.2
473
Tumor
0.2
523
Tumor
0.2
953
Tumor
0.2
957
Tumor
0.2
515
Tumor
0.2
451
Tumor
0.2
627
Tumor
0.2
535
Tumor
0.1
913
Tumor
0.1
715
Tumor
0.1
445
Tumor
0.1
112
Tumor
0.1
447
Tumor
0.1
1015
Tumor
0.1
553
Tumor
0.1
415
Tumor
0.1
563
Tumor
0.1
394
Normal
0.1
881
Tumor
0.0
386
Normal
0.0
863
Tumor
0.0
911
Tumor
0.0
777
Tumor
0.0
388
Normal
0.0
951
Tumor
0.0
456
Normal
0.0
463
Tumor
0.0
467
Tumor
0.0
431
Tumor
0.0
217
Tumor
0.0
444
Normal
0.0
443
Tumor
0.0
271
Tumor
0.0
354
Normal
0.0
464
Normal
0.0
452
Normal
-0.1
365
Tumor
-0.1
358
Normal
-0.1
671
Tumor
-0.1
188
Normal
-0.1
461
Tumor
-0.1
481
Tumor
-0.1
141
Tumor
-0.1
187
Tumor
-0.1
867
Tumor
-0.1
982
Normal
-0.1
975
Tumor
-0.1
375
Tumor
-0.1
195
Tumor
-0.1
1016
Normal
-0.1
312
Normal
-0.1
981
Tumor
-0.1
468
Normal
-0.1
1014
Normal
-0.1
396
Normal
-0.2
434
Normal
-0.2
353
Tumor
-0.2
914
Normal
-0.2
857
Tumor
-0.2
755
Tumor
-0.2
713
Tumor
-0.2
392
Normal
-0.2
567
Tumor
-0.2
268
Normal
-0.2
344
Normal
-0.2
874
Normal
-0.2
455
Tumor
-0.2
298
Normal
-0.2
861
Tumor
-0.2
342
Normal
-0.2
978
Normal
-0.2
916
Normal
-0.2
332
Normal
-0.2
815
Tumor
-0.2
466
Normal
-0.2
537
Tumor
-0.2
213
Tumor
-0.2
912
Normal
-0.3
366
Normal
-0.3
272
Normal
-0.3
162
Normal
-0.3
352
Normal
-0.3
516
Normal
-0.3
428
Normal
-0.3
568
Normal
-0.3
617
Tumor
-0.3
278
Normal
-0.3
1041
Tumor
-0.3
721
Tumor
-0.3
816
Normal
-0.3
478
Normal
-0.3
498
Normal
-0.3
364
Normal
-0.3
956
Normal
-0.3
416
Normal
-0.3
491
Tumor
-0.3
858
Normal
-0.3
492
Normal
-0.3
976
Normal
-0.3
138
Normal
-0.3
262
Normal
-0.3
642
Normal
-0.3
424
Normal
-0.3
672
Normal
-0.3
172
Normal
-0.3
818
Normal
-0.3
471
Tumor
-0.3
921
Tumor
-0.3
966
Normal
-0.3
113
Tumor
-0.3
882
Normal
-0.3
422
Normal
-0.4
1042
Normal
-0.4
314
Normal
-0.4
258
Normal
-0.4
284
Normal
-0.4
384
Normal
-0.4
952
Normal
-0.4
924
Normal
-0.4
664
Normal
-0.4
878
Normal
-0.4
125
Tumor
-0.4
564
Normal
-0.4
865
Tumor
-0.4
414
Normal
-0.4
926
Normal
-0.4
574
Normal
-0.4
536
Normal
-0.4
146
Normal
-0.4
984
Normal
-0.4
884
Normal
-0.4
915
Tumor
-0.4
261
Tumor
-0.4
126
Normal
-0.4
618
Normal
-0.4
852
Normal
-0.4
558
Normal
-0.4
662
Normal
-0.4
186
Normal
-0.4
1031
Tumor
-0.4
362
Normal
-0.4
964
Normal
-0.4
426
Normal
-0.5
191
Tumor
-0.5
432
Normal
-0.5
224
Normal
-0.5
128
Normal
-0.5
436
Normal
-0.5
232
Normal
-0.5
446
Normal
-0.5
327
Tumor
-0.5
124
Normal
-0.5
722
Normal
-0.5
111
Normal
-0.5
824
Normal
-0.5
636
Normal
-0.5
524
Normal
-0.5
192
Normal
-0.5
628
Normal
-0.5
412
Normal
-0.5
421
Tumor
-0.5
214
Normal
-0.5
145
Tumor
-0.5
727
Tumor
-0.5
283
Tumor
-0.5
114
Normal
-0.5
1032
Normal
-0.5
148
Normal
-0.5
958
Normal
-0.5
514
Normal
-0.5
368
Normal
-0.5
918
Normal
-0.5
482
Normal
-0.5
328
Normal
-0.5
546
Normal
-0.5
823
Tumor
-0.5
212
Normal
-0.5
538
Normal
-0.5
616
Normal
-0.5
877
Tumor
-0.6
223
Tumor
-0.6
922
Normal
-0.6
517
Tumor
-0.6
356
Normal
-0.6
648
Normal
-0.6
462
Normal
-0.6
135
Tumor
-0.6
938
Normal
-0.6
488
Normal
-0.6
866
Normal
-0.6
686
Normal
-0.6
376
Normal
-0.6
1044
Normal
-0.6
1046
Normal
-0.6
363
Tumor
-0.6
716
Normal
-0.6
526
Normal
-0.6
147
Tumor
-0.6
136
Normal
-0.6
518
Normal
-0.6
132
Normal
-0.6
696
Normal
-0.6
196
Normal
-0.6
572
Normal
-0.7
666
Normal
-0.7
285
Tumor
-0.7
714
Normal
-0.7
131
Tumor
-0.7
1028
Normal
-0.7
728
Normal
-0.7
1022
Normal
-0.7
142
Normal
-0.7
222
Normal
-0.7
286
Normal
-0.7
746
Normal
-0.7
1026
Normal
-0.7
474
Normal
-0.7
534
Normal
-0.7
944
Normal
-0.7
257
Tumor
-0.7
868
Normal
-0.7
494
Normal
-0.8
864
Normal
-0.8
738
Normal
-0.8
851
Tumor
-0.8
968
Normal
-0.8
554
Normal
-0.8
862
Normal
-0.8
698
Normal
-0.8
744
Normal
-0.8
785
Tumor
-0.8
221
Tumor
-0.8
448
Normal
-0.8
528
Normal
-0.8
472
Normal
-0.8
425
Tumor
-0.9
484
Normal
-0.9
218
Normal
-0.9
228
Normal
-0.9
778
Normal
-0.9
756
Normal
-0.9
955
Tumor
-1.0
723
Tumor
-1.0
742
Normal
-1.0
1043
Tumor
-1.0
227
Tumor
-1.0
786
Normal
-1.1
954
Normal
-1.1
737
Tumor
-1.2
1025
Tumor
-1.3
745
Tumor
-1.4
743
Tumor
-1.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
