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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPN11 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
73.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
65.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
58.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
56.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
56.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
53.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
51.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
49.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
49.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
48.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
45.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
44.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
41.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
40.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
40.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
40.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
39.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
38.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
37.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
36.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
35.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
34.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
33.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
32.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
32.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
31.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
31.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
31.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
31.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
28.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
27.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
27.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
26.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
25.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
24.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
23.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
23.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
23.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
22.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
21.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
20.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
20.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
20.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
20.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
20.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
19.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
19.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
18.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
18.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
18.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
18.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
17.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
17.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
17.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
17.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
16.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
16.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
16.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
15.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
14.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPN11 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
110.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
71.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
66.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
65.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
65.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
65.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
65.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
64.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
63.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
61.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
57.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
57.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
57.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
54.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
53.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
52.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
51.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
51.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
50.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
50.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
50.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
50.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
50.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
50.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
49.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
49.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
49.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
49.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
48.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
48.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
48.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
48.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
48.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
48.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
48.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
48.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
47.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
47.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
47.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
47.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
47.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
47.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
46.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
46.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
46.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
46.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
46.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
46.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
46.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
45.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
45.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
45.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
45.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
45.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
45.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
45.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
44.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
44.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
44.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
44.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
44.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
44.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
44.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
44.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
44.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
44.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
44.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
44.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
43.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
43.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
43.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
43.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
43.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
43.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
43.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
43.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
43.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
43.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
42.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
42.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
42.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
42.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
42.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
42.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
42.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
42.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
42.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
41.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
41.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
41.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
41.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
41.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
41.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
41.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
41.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
41.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
41.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
41.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
40.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
40.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
40.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
40.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
39.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
39.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
39.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
39.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
39.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
39.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
39.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
39.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
39.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
39.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
39.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
39.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
38.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
38.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
38.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
38.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
38.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
38.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
38.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
38.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
38.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
38.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
38.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
38.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
38.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
38.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
38.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
37.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
37.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
37.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
37.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
37.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
37.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
37.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
37.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
37.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
37.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
37.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
37.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
37.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
37.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
37.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
37.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
36.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
36.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
36.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
36.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
36.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
36.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
36.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
36.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
36.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
36.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
36.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
35.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
35.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
35.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
35.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
35.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
35.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
35.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
35.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
35.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
35.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
35.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
35.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
34.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
34.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
34.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
34.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
34.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
34.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
34.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
34.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
34.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
34.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
34.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
34.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
34.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
34.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
33.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
33.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
33.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
33.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
33.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
33.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
33.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
33.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
33.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
33.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
33.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
33.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
33.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
33.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
33.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
33.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
32.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
32.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
32.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
32.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
32.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
32.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
32.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
31.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
31.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
31.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
31.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
31.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
31.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
31.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
31.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
31.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
31.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
31.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
31.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
31.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
31.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
30.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
30.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
30.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
30.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
30.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
30.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
30.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
30.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
29.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
29.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
29.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
29.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
29.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
29.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
29.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
29.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
29.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
29.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
29.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
29.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
29.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
29.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
29.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
29.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
29.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
28.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
28.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
28.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
28.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
28.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
28.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
28.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
28.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
28.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
28.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
28.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
28.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
28.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
28.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
28.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
28.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
28.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
28.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
28.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
28.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
27.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
27.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
27.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
27.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
27.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
27.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
27.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
27.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
27.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
27.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
27.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
27.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
27.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
27.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
27.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
27.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
26.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
26.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
26.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
26.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
26.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
26.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
26.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
26.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
26.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
26.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
26.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
26.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
26.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
26.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
26.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
26.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
26.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
26.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
25.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
25.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
25.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
25.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
25.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
25.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
25.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
25.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
25.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
25.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
25.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
24.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
24.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
24.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
24.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
24.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
24.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
24.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
24.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
24.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
24.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
23.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
23.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
23.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
23.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
23.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
23.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
23.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
23.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
23.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
23.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
23.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
23.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
23.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
23.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
23.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
23.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
22.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
22.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
22.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
22.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
22.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
22.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
22.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
22.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
22.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
22.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
22.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
22.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
22.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
22.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
22.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
22.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
22.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
22.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
22.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
21.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
21.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
21.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
21.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
21.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
21.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
21.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
21.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
21.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
21.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
21.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
21.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
20.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
20.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
20.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
20.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
20.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
20.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
20.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
20.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
20.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
20.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
20.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
20.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
19.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
19.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
19.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
19.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
19.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
19.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
19.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
19.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
19.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
18.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
18.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
18.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
18.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
18.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
18.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
18.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
17.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
17.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
17.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
16.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
16.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
16.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
16.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
16.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
16.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
16.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
15.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
15.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
15.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
15.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
15.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
15.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
15.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
15.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
15.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
14.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
14.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
13.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
13.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
12.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
9.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
9.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
7.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPN11 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
100.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
73.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
68.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
62.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
62.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
61.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
60.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
58.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
57.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
56.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
56.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
56.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
56.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
56.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
55.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
54.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
53.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
53.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
53.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
53.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
52.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
52.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
51.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
50.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
50.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
50.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
50.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
49.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
49.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
48.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
47.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
47.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
46.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
46.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
45.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
44.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
44.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
44.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
43.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
43.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
43.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
43.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
42.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
42.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
42.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
42.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
42.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
41.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
41.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
41.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
41.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
40.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
40.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
40.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
40.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
40.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
39.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
39.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
38.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
38.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
38.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
38.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
38.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
37.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
37.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
37.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
37.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
36.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
36.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
35.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
34.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
33.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
32.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
32.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
32.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
31.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
31.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
30.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
30.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
28.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
28.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
27.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
26.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
26.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
26.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
25.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
24.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
20.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
17.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
16.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPN11 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
87.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
78.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
77.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
72.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
70.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
68.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
68.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
65.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
60.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
59.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
59.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
56.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
55.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
55.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
54.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
54.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
53.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
53.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
52.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
52.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
52.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
52.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
51.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
51.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
51.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
50.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
50.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
49.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
48.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
47.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
47.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
47.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
46.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
46.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
46.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
46.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
45.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
44.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
44.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
44.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
44.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
44.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
43.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
43.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
43.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
43.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
43.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
43.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
43.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
42.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
42.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
42.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
42.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
42.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
42.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
42.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
41.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
41.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
41.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
41.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
40.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
40.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
40.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
39.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
39.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
39.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
39.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
39.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
39.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
37.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
37.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
37.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
37.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
37.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
37.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
36.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
36.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
36.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
36.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
35.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
35.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
35.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
35.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
35.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
35.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
35.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
34.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
34.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
34.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
34.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
34.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
34.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
34.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
33.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
33.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
33.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
33.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
33.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
33.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
32.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
32.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
32.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
32.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
32.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
32.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
32.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
31.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
31.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
31.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
31.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
30.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
30.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
30.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
30.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
30.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
30.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
29.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
29.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
29.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
29.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
29.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
29.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
29.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
29.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
29.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
28.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
28.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
28.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
27.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
27.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
27.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
27.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
27.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
27.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
27.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
27.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
27.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
27.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
26.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
26.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
26.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
26.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
26.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
26.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
26.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
26.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
26.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
26.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
25.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
25.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
25.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
24.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
24.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
24.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
24.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
24.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
24.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
23.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
23.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
23.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
23.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
23.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
23.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
23.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
22.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
22.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
22.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
22.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
22.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
21.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
21.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
21.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
21.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
21.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
21.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
21.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
21.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
20.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
20.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
20.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
20.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
19.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
19.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
19.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
19.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
19.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
19.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
19.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
19.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
19.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
18.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
18.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
18.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
18.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
17.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
17.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
17.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
17.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
17.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
16.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
16.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
16.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
16.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
16.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
15.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
15.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
15.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
15.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
15.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
14.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
14.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
14.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
14.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
14.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
14.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
14.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
13.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
13.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
12.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
11.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
11.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
11.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
10.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
9.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
9.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
9.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
8.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
8.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
7.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
6.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
4.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.7
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0014450004
Tumor
0.8
CPT0001180009
Tumor
0.7
CPT0011410003
Tumor
0.6
CPT0024670003
Tumor
0.6
CPT0078660003
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0079180003
Tumor
0.5
CPT0088970003
Tumor
0.5
CPT0021240003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0010160003
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0079510001
Normal
0.3
CPT0063630003
Tumor
0.3
CPT0077110003
Tumor
0.2
CPT0076330003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0010120001
Normal
0.2
CPT0066480003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0014160003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0007860003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0092790003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0009020003
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0007470001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0006530001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0012920003
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0082010001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0075170001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0069190001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0081880003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0086370003
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0012280003
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
