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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAMD4B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
115.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
111.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
104.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
103.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
99.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
94.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
87.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
83.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
81.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
78.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
72.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
71.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
67.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
67.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
66.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
64.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
62.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
62.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
61.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
61.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
61.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
57.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
56.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
56.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
55.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
52.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
51.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
51.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
50.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
50.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
49.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
48.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
47.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
44.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
43.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
41.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
41.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
41.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
38.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
37.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
37.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
36.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
36.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
35.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
34.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
34.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
33.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
33.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
32.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
32.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
29.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
28.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
28.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
28.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
28.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
24.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
24.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
23.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
22.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
22.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
21.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
20.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
17.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAMD4B is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
100.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
96.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
92.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
84.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
77.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
73.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
71.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
70.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
69.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
69.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
66.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
65.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
64.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
64.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
64.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
64.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
63.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
62.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
62.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
62.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
61.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
61.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
61.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
60.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
60.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
59.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
59.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
58.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
58.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
58.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
58.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
57.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
57.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
57.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
57.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
57.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
57.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
56.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
56.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
56.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
56.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
56.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
56.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
56.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
56.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
56.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
55.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
55.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
55.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
55.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
55.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
55.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
55.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
55.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
55.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
54.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
54.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
54.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
54.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
54.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
53.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
53.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
53.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
53.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
53.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
53.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
53.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
53.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
53.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
53.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
53.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
53.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
53.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
52.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
52.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
52.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
52.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
52.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
52.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
52.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
52.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
51.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
51.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
51.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
51.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
51.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
51.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
51.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
51.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
50.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
50.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
50.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
50.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
50.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
50.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
50.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
49.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
49.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
49.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
49.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
49.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
49.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
49.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
49.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
49.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
49.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
49.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
49.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
49.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
49.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
48.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
48.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
48.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
48.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
48.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
48.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
48.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
48.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
48.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
48.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
48.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
47.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
47.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
47.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
47.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
47.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
47.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
47.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
47.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
47.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
47.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
47.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
47.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
47.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
46.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
46.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
46.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
46.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
46.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
46.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
46.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
46.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
46.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
46.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
45.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
45.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
45.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
45.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
45.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
45.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
45.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
45.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
45.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
45.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
45.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
45.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
44.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
44.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
44.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
44.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
44.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
44.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
44.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
44.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
44.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
43.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
43.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
43.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
43.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
43.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
43.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
43.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
43.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
43.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
42.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
42.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
42.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
42.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
42.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
42.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
42.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
42.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
42.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
42.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
42.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
42.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
42.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
42.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
42.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
42.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
42.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
41.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
41.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
41.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
41.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
41.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
41.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
41.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
41.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
41.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
41.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
41.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
41.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
41.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
41.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
41.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
41.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
41.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
40.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
40.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
40.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
40.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
40.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
40.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
40.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
40.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
40.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
40.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
40.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
39.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
39.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
39.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
39.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
39.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
39.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
39.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
39.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
39.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
39.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
39.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
39.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
39.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
39.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
38.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
38.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
38.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
38.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
38.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
38.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
38.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
38.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
38.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
37.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
37.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
37.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
37.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
37.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
37.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
37.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
36.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
36.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
36.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
36.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
36.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
36.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
36.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
36.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
36.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
36.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
36.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
36.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
36.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
36.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
36.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
36.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
36.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
36.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
36.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
36.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
36.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
35.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
35.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
35.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
35.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
35.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
35.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
35.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
35.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
35.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
35.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
35.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
35.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
35.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
35.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
35.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
34.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
34.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
34.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
34.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
34.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
34.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
34.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
34.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
34.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
34.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
34.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
34.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
34.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
33.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
33.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
33.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
33.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
33.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
33.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
33.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
33.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
33.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
33.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
33.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
33.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
33.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
33.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
32.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
32.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
32.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
32.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
32.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
32.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
32.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
32.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
32.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
32.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
32.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
32.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
32.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
32.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
32.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
32.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
32.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
32.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
32.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
32.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
32.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
32.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
32.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
32.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
32.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
31.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
31.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
31.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
31.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
31.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
31.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
31.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
31.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
31.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
31.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
31.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
31.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
31.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
31.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
30.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
30.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
30.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
30.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
30.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
30.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
30.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
30.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
29.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
29.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
29.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
29.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
29.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
29.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
29.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
29.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
29.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
29.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
28.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
28.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
28.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
28.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
28.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
28.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
28.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
28.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
28.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
27.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
27.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
27.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
27.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
27.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
27.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
27.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
27.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
27.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
27.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
27.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
27.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
27.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
26.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
26.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
26.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
26.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
26.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
26.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
26.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
26.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
26.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
26.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
25.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
25.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
25.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
25.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
25.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
25.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
25.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
25.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
25.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
25.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
25.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
25.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
25.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
24.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
24.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
24.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
24.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
24.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
23.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
23.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
23.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
23.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
23.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
23.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
22.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
22.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
22.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
22.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
21.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
21.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
21.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
21.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
21.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
21.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
21.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
21.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
21.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
21.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
20.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
20.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
20.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
20.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
20.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
20.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
20.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
20.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
20.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
19.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
19.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
19.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
19.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
18.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
18.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
17.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
16.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
16.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
16.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
16.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
15.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
15.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
15.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
14.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
13.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
12.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
10.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
7.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
6.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAMD4B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
177.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
72.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
67.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
66.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
62.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
61.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
61.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
61.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
61.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
57.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
57.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
56.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
55.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
54.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
53.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
51.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
50.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
50.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
50.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
50.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
50.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
49.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
49.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
48.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
48.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
47.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
47.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
47.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
46.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
46.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
46.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
45.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
45.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
45.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
45.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
45.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
44.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
44.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
44.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
43.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
43.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
42.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
42.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
41.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
41.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
41.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
41.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
41.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
40.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
39.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
39.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
38.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
38.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
37.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
37.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
37.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
36.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
35.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
35.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
35.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
34.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
34.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
34.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
34.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
34.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
33.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
33.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
33.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
33.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
32.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
32.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
32.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
32.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
31.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
31.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
31.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
31.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
31.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
31.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
30.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
29.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
29.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
28.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
27.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
27.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
26.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
26.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
24.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
24.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
24.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
23.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
23.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
21.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
18.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAMD4B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
427.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
199.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
111.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
110.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
104.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
102.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
97.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
96.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
92.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
91.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
90.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
88.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
85.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
84.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
82.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
80.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
80.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
78.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
77.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
76.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
76.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
76.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
75.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
75.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
74.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
74.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
73.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
73.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
72.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
72.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
70.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
66.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
66.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
65.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
64.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
64.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
63.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
62.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
62.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
62.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
62.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
62.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
61.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
61.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
61.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
61.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
58.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
58.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
57.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
57.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
57.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
56.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
56.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
56.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
55.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
55.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
55.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
54.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
54.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
54.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
54.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
53.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
53.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
53.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
53.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
53.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
52.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
52.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
51.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
51.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
51.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
51.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
50.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
50.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
49.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
49.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
49.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
48.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
48.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
48.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
48.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
47.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
47.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
46.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
45.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
45.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
45.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
45.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
45.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
45.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
45.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
44.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
43.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
43.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
43.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
43.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
42.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
42.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
42.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
41.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
41.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
41.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
41.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
41.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
41.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
40.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
40.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
39.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
39.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
39.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
39.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
39.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
39.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
39.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
38.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
38.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
38.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
38.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
37.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
37.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
37.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
37.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
37.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
37.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
37.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
37.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
36.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
36.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
36.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
36.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
35.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
35.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
35.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
35.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
35.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
34.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
34.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
34.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
34.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
34.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
34.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
33.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
33.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
33.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
33.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
33.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
33.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
32.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
32.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
32.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
32.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
32.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
32.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
32.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
32.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
31.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
31.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
31.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
31.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
30.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
30.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
29.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
29.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
29.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
29.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
29.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
29.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
29.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
29.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
28.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
28.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
28.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
28.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
27.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
26.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
26.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
26.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
26.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
26.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
26.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
26.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
26.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
26.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
25.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
25.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
25.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
25.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
24.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
24.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
24.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
24.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
24.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
24.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
24.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
23.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
23.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
23.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
23.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
22.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
22.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
22.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
22.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
21.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
21.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
21.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
21.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
21.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
20.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
20.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
19.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
19.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
19.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
19.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
18.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
18.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
18.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
18.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
17.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
17.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
16.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
16.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
16.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
16.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
15.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
15.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
15.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
14.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
14.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
14.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
13.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
12.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
11.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
10.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
9.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
9.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
7.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
5.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.0
CPT0001180009
Tumor
0.7
CPT0001340003
Tumor
0.7
CPT0076330003
Tumor
0.6
CPT0078660003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0011240003
Tumor
0.5
CPT0078510003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0065690003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0017410003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0014370004
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0088480003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0002270011
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0086950003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0075130003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0092740003
Normal
0.0
CPT0087050003
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0012920003
Normal
0.0
CPT0001230001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0081620001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0013790003
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0086890003
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0012290003
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0089020003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0012180003
Tumor
-0.2
CPT0079380003
Tumor
-0.3
CPT0092310003
Normal
-0.3
CPT0064370003
Tumor
-0.3
CPT0025060001
Normal
-0.3
CPT0014130001
Normal
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
