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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
P4HTM is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
86.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
85.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
81.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
76.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
75.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
70.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
68.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
65.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
61.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
60.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
58.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
57.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
56.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
53.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
53.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
50.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
49.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
49.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
48.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
48.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
44.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
42.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
42.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
41.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
39.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
39.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
38.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
38.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
38.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
37.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
37.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
37.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
37.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
36.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
36.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
34.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
34.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
33.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
33.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
32.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
31.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
31.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
30.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
30.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
30.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
30.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
29.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
29.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
26.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
24.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
24.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
23.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
20.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
20.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
19.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
18.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
18.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
18.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
17.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
16.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
14.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
14.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
P4HTM is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
63.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
62.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
61.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
52.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
51.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
49.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
45.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
44.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
42.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
42.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
42.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
42.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
40.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
40.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
40.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
39.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
38.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
38.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
37.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
36.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
36.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
36.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
36.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
35.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
35.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
35.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
35.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
34.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
34.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
34.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
33.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
33.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
33.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
32.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
32.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
31.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
31.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
31.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
31.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
30.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
29.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
29.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
28.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
28.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
28.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
28.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
28.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
28.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
28.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
28.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
28.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
27.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
27.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
27.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
27.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
27.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
27.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
27.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
27.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
27.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
27.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
27.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
27.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
26.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
26.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
26.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
26.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
26.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
26.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
26.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
26.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
26.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
26.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
26.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
26.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
26.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
26.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
25.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
25.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
25.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
25.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
25.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
25.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
25.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
25.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
25.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
25.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
24.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
24.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
24.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
24.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
24.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
24.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
24.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
24.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
24.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
24.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
24.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
24.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
24.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
24.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
24.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
23.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
23.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
23.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
23.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
23.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
23.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
23.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
23.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
23.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
23.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
23.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
23.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
23.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
23.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
23.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
23.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
23.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
23.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
23.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
23.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
23.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
23.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
22.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
22.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
22.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
22.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
22.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
22.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
22.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
22.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
22.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
22.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
22.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
22.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
22.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
22.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
22.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
22.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
22.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
22.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
22.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
22.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
22.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
22.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
22.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
22.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
21.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
21.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
21.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
21.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
21.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
21.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
21.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
21.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
21.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
21.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
21.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
21.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
21.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
21.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
21.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
21.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
21.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
21.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
21.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
21.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
21.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
20.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
20.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
20.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
20.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
20.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
20.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
20.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
20.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
20.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
20.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
20.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
20.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
20.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
20.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
20.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
20.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
20.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
20.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
20.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
19.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
19.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
19.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
19.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
19.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
19.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
19.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
19.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
19.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
19.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
19.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
19.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
19.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
19.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
19.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
19.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
19.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
19.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
19.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
19.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
19.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
19.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
19.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
19.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
19.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
19.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
18.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
18.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
18.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
18.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
18.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
18.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
18.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
18.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
18.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
18.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
18.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
18.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
18.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
18.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
18.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
18.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
18.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
18.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
18.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
18.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
18.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
18.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
18.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
18.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
18.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
18.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
18.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
18.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
17.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
17.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
17.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
17.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
17.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
17.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
17.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
17.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
17.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
17.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
17.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
17.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
17.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
17.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
17.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
17.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
17.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
17.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
17.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
17.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
17.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
17.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
17.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
17.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
17.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
17.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
17.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
17.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
17.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
17.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
17.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
17.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
17.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
16.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
16.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
16.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
16.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
16.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
16.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
16.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
16.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
16.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
16.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
16.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
16.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
16.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
16.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
16.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
16.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
16.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
16.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
16.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
16.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
15.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
15.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
15.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
15.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
15.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
15.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
15.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
15.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
15.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
15.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
15.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
15.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
15.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
15.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
15.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
15.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
15.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
15.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
15.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
15.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
15.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
15.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
14.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
14.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
14.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
14.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
14.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
14.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
14.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
14.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
14.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
14.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
14.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
14.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
14.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
14.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
14.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
13.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
13.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
13.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
13.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
13.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
13.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
13.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
13.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
13.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
13.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
13.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
13.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
13.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
13.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
12.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
12.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
12.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
12.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
11.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
11.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
11.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
11.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
11.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
11.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
10.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
10.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
9.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
9.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
9.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
8.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
8.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
P4HTM is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
57.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
51.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
44.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
43.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
43.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
41.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
40.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
39.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
36.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
34.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
33.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
33.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
32.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
32.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
31.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
30.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
29.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
29.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
28.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
28.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
27.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
27.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
27.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
26.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
26.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
25.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
25.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
25.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
25.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
25.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
24.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
24.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
23.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
23.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
23.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
23.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
23.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
22.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
21.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
21.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
21.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
21.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
21.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
20.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
20.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
20.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
19.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
19.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
19.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
19.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
18.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
18.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
18.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
18.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
18.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
17.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
17.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
17.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
17.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
16.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
16.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
15.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
15.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
14.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
14.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
14.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
13.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
13.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
12.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
12.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
12.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
11.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
9.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
9.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
P4HTM is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
151.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
128.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
112.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
111.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
103.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
98.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
97.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
97.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
97.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
94.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
94.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
93.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
91.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
90.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
87.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
86.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
85.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
84.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
84.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
84.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
83.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
81.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
80.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
80.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
80.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
79.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
79.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
79.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
79.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
78.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
77.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
77.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
75.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
74.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
73.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
73.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
73.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
71.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
71.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
71.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
70.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
70.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
70.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
70.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
69.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
69.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
68.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
68.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
68.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
68.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
68.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
67.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
67.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
67.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
67.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
66.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
64.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
64.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
64.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
64.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
64.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
64.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
64.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
63.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
63.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
62.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
62.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
62.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
61.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
61.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
60.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
60.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
60.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
59.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
59.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
59.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
58.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
58.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
58.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
57.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
57.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
57.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
56.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
56.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
56.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
55.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
55.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
55.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
55.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
55.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
55.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
55.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
54.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
54.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
54.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
54.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
53.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
53.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
53.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
53.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
53.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
53.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
53.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
52.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
52.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
52.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
52.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
52.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
51.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
51.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
51.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
51.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
50.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
50.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
50.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
50.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
49.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
49.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
49.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
49.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
49.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
48.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
48.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
47.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
47.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
47.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
47.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
47.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
47.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
46.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
46.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
45.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
45.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
45.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
45.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
45.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
45.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
45.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
45.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
44.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
44.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
44.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
44.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
44.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
43.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
43.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
43.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
43.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
43.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
43.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
43.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
42.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
42.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
42.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
42.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
42.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
42.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
41.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
41.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
41.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
41.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
41.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
41.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
41.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
41.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
41.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
40.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
40.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
40.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
40.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
40.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
40.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
40.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
40.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
40.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
40.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
40.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
39.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
39.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
39.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
39.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
39.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
39.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
39.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
39.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
39.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
38.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
38.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
38.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
38.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
38.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
38.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
38.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
38.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
38.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
38.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
37.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
37.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
37.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
36.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
36.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
36.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
36.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
36.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
36.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
36.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
36.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
35.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
35.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
35.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
35.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
34.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
34.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
34.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
34.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
33.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
33.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
33.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
33.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
33.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
33.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
33.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
32.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
32.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
32.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
32.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
32.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
31.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
31.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
31.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
31.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
30.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
30.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
30.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
30.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
30.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
30.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
30.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
30.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
29.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
29.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
29.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
28.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
28.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
28.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
28.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
28.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
28.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
27.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
27.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
26.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
26.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
25.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
25.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
25.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
25.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
24.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
24.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
24.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
24.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
24.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
24.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
24.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
23.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
23.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
22.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
22.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
22.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
21.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
21.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
20.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
18.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
17.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
15.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
15.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
14.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
11.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0092290003
Tumor
1.2
CPT0086820003
Tumor
1.0
CPT0012280003
Tumor
1.0
CPT0084560003
Tumor
1.0
CPT0065750003
Tumor
0.9
CPT0020120003
Tumor
0.9
CPT0010110003
Tumor
0.8
CPT0015730003
Tumor
0.8
CPT0069160003
Tumor
0.7
CPT0014160003
Tumor
0.7
CPT0065430003
Tumor
0.7
CPT0069000003
Tumor
0.6
CPT0078830003
Tumor
0.6
CPT0063630003
Tumor
0.6
CPT0088690003
Tumor
0.6
CPT0078510003
Tumor
0.6
CPT0065930003
Tumor
0.5
CPT0078800003
Tumor
0.5
CPT0026410003
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0079230003
Tumor
0.5
CPT0077110003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0065810003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0006950001
Normal
0.3
CPT0086360003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0081880003
Tumor
0.3
CPT0081620001
Normal
0.3
CPT0025880003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0001260009
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0025350003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0023360001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0071150004
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0012180003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0065870003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0079300001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0001510001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0088630003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0012900004
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0011410003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0017850003
Tumor
-0.1
CPT0019160001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0009000003
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0007870001
Normal
-0.3
CPT0011240003
Tumor
-0.3
CPT0025060001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0075560003
Tumor
-0.3
CPT0010170001
Normal
-0.3
CPT0088900003
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0014370004
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0014130001
Normal
-0.3
CPT0088970003
Tumor
-0.4
CPT0001550001
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0079180003
Tumor
-0.4
CPT0012920003
Normal
-0.4
CPT0017450001
Normal
-0.5
CPT0014470001
Normal
-0.5
CPT0000780007
Tumor
-0.5
CPT0002270011
Tumor
-0.5
CPT0001340003
Tumor
-0.5
CPT0009080003
Normal
-0.6
CPT0078660003
Tumor
-0.6
CPT0088550004
Tumor
-0.8
CPT0014450004
Tumor
-1.2
CPT0001180009
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0086890003
Normal
N/A
CPT0082010001
Normal
N/A
CPT0001190001
Normal
N/A
CPT0015910003
Tumor
N/A
CPT0063320003
Tumor
N/A
CPT0086870003
Tumor
N/A
CPT0081990003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
