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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WDR6 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
66.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
160.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
135.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
133.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
116.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
116.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
113.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
113.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
109.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
107.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
101.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
99.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
89.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
86.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
82.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
81.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
79.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
78.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
77.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
76.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
76.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
73.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
73.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
73.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
69.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
69.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
69.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
68.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
68.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
68.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
66.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
66.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
65.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
63.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
60.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
59.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
58.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
52.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
52.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
51.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
51.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
50.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
49.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
48.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
48.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
46.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
45.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
44.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
43.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
43.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
42.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
42.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
41.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
41.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
40.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
40.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
38.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
38.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
37.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
36.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
34.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
33.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
28.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
27.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WDR6 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
117.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
111.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
109.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
101.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
99.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
99.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
95.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
92.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
90.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
89.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
84.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
84.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
84.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
83.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
81.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
81.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
81.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
81.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
78.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
77.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
77.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
76.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
74.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
74.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
72.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
71.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
71.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
69.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
68.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
68.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
68.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
67.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
67.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
67.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
66.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
66.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
66.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
65.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
65.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
65.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
64.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
64.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
64.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
64.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
64.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
64.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
64.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
63.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
63.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
63.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
62.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
62.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
62.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
62.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
61.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
61.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
60.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
60.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
60.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
60.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
60.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
59.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
59.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
59.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
59.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
59.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
59.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
58.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
58.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
57.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
57.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
57.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
57.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
57.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
56.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
56.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
56.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
56.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
56.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
56.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
55.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
55.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
55.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
55.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
55.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
55.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
55.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
55.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
54.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
54.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
54.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
54.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
54.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
53.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
53.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
53.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
52.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
52.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
52.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
52.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
52.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
52.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
52.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
52.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
51.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
51.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
51.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
51.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
51.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
51.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
51.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
51.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
51.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
51.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
50.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
50.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
50.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
49.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
49.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
49.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
49.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
49.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
49.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
49.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
49.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
49.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
49.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
49.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
49.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
49.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
49.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
49.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
49.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
48.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
48.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
48.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
48.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
48.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
47.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
47.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
47.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
47.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
47.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
47.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
47.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
47.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
47.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
47.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
46.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
46.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
46.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
46.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
46.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
46.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
46.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
46.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
46.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
45.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
45.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
45.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
45.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
45.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
45.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
45.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
45.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
45.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
45.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
45.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
44.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
44.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
44.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
44.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
44.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
44.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
44.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
44.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
44.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
44.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
44.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
44.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
44.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
44.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
43.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
43.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
43.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
43.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
43.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
43.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
43.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
43.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
43.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
43.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
43.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
43.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
43.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
43.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
43.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
43.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
42.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
42.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
42.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
42.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
42.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
42.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
42.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
42.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
42.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
42.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
42.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
42.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
41.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
41.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
41.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
41.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
41.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
41.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
41.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
41.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
41.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
41.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
41.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
41.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
41.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
41.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
40.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
40.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
40.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
40.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
40.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
40.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
40.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
40.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
40.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
40.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
39.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
39.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
39.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
39.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
39.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
39.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
39.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
39.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
38.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
38.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
38.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
38.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
38.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
38.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
38.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
38.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
38.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
38.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
38.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
38.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
38.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
38.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
37.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
37.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
37.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
37.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
37.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
37.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
37.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
37.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
37.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
37.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
37.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
37.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
37.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
37.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
37.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
37.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
37.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
37.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
37.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
37.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
36.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
36.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
36.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
36.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
36.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
36.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
36.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
36.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
36.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
36.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
36.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
36.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
35.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
35.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
35.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
35.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
35.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
35.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
35.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
35.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
35.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
35.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
35.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
35.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
34.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
34.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
34.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
34.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
34.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
34.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
34.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
34.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
34.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
34.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
34.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
34.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
34.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
34.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
34.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
34.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
33.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
33.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
33.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
33.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
33.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
33.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
33.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
33.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
33.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
33.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
33.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
33.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
33.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
33.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
33.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
33.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
33.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
33.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
32.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
32.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
32.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
32.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
32.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
32.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
32.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
32.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
32.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
32.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
31.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
31.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
31.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
31.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
31.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
31.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
31.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
31.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
31.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
31.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
31.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
31.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
31.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
31.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
31.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
30.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
30.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
30.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
30.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
30.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
30.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
30.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
30.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
30.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
30.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
30.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
30.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
30.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
30.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
30.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
30.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
30.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
30.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
30.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
30.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
30.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
30.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
29.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
29.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
29.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
29.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
29.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
29.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
29.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
29.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
29.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
29.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
29.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
29.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
29.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
29.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
28.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
28.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
28.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
28.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
28.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
28.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
28.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
28.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
28.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
28.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
28.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
28.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
28.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
28.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
28.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
27.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
27.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
27.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
26.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
26.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
26.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
26.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
26.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
26.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
26.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
26.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
26.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
26.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
26.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
26.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
26.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
26.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
25.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
25.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
25.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
25.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
25.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
25.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
25.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
25.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
25.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
25.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
25.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
24.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
24.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
24.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
24.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
24.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
24.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
24.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
24.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
24.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
24.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
24.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
24.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
23.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
23.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
23.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
23.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
23.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
23.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
23.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
23.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
23.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
23.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
23.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
23.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
23.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
22.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
22.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
22.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
22.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
22.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
22.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
22.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
22.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
21.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
21.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
21.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
21.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
21.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
20.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
20.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
20.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
20.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
20.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
19.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
19.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
19.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
19.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
18.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
17.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
17.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
17.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
17.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
16.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
16.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
15.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
15.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
14.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
14.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
14.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
13.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
12.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
11.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
11.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
7.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WDR6 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
75.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
72.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
69.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
68.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
62.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
62.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
61.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
60.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
60.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
59.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
59.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
58.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
57.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
57.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
56.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
56.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
55.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
54.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
53.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
52.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
50.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
49.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
49.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
48.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
48.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
47.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
47.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
46.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
46.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
46.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
46.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
46.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
45.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
45.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
45.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
45.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
44.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
44.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
44.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
43.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
42.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
42.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
42.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
42.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
42.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
41.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
41.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
41.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
40.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
40.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
39.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
39.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
39.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
39.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
39.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
39.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
38.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
38.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
38.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
38.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
38.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
38.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
38.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
38.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
37.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
37.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
37.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
36.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
36.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
35.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
35.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
35.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
35.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
35.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
33.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
32.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
32.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
31.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
31.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
30.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
30.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
28.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
28.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
28.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
28.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
26.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
26.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
26.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
25.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
25.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
24.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
24.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
22.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
19.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
16.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WDR6 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
88.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
246.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
184.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
181.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
180.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
178.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
177.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
174.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
172.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
164.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
161.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
159.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
154.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
152.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
151.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
150.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
144.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
144.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
143.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
141.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
141.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
140.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
138.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
138.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
138.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
135.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
135.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
133.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
133.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
131.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
131.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
130.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
130.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
129.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
128.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
128.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
127.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
126.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
126.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
125.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
125.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
125.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
123.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
123.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
123.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
123.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
122.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
122.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
122.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
115.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
114.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
114.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
114.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
113.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
113.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
113.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
113.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
112.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
112.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
112.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
111.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
111.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
111.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
110.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
109.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
109.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
109.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
108.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
108.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
108.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
107.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
107.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
106.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
105.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
105.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
105.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
105.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
105.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
105.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
105.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
104.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
103.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
102.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
102.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
102.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
101.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
101.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
101.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
100.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
100.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
100.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
100.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
99.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
97.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
97.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
97.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
97.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
97.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
96.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
96.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
96.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
95.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
95.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
94.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
94.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
94.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
94.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
94.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
93.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
92.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
92.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
92.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
91.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
91.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
91.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
91.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
91.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
90.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
90.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
89.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
89.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
88.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
88.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
87.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
87.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
87.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
87.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
87.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
87.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
87.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
86.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
86.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
86.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
85.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
84.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
84.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
84.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
84.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
84.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
84.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
83.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
83.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
83.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
83.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
82.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
82.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
82.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
82.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
82.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
81.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
81.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
81.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
81.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
81.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
81.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
81.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
81.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
81.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
81.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
80.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
80.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
79.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
79.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
79.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
78.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
78.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
77.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
77.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
77.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
77.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
76.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
76.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
75.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
75.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
74.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
74.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
74.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
73.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
73.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
73.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
73.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
72.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
72.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
72.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
72.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
72.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
71.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
71.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
71.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
71.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
71.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
70.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
70.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
70.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
70.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
70.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
69.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
69.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
68.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
68.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
68.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
67.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
67.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
66.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
65.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
65.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
65.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
65.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
64.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
64.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
64.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
63.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
63.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
63.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
63.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
63.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
63.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
62.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
62.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
62.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
61.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
61.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
61.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
60.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
60.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
60.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
59.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
59.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
59.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
59.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
58.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
58.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
58.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
58.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
57.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
56.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
56.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
56.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
55.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
55.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
54.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
54.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
54.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
54.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
54.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
53.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
53.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
52.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
50.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
49.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
49.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
49.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
49.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
48.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
48.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
48.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
46.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
45.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
44.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
43.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
43.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
42.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
42.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
42.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
41.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
41.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
40.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
40.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
39.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
36.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
36.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
36.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
36.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
36.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
35.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
34.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
34.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
30.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
30.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
27.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
25.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
22.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
21.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
1.1
CPT0063320003
Tumor
0.7
CPT0001340003
Tumor
0.6
CPT0012550003
Tumor
0.6
CPT0002270011
Tumor
0.6
CPT0001260009
Tumor
0.6
CPT0065690003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0092290003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0024680001
Normal
0.3
CPT0066520001
Normal
0.3
CPT0079180003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0081880003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0092310003
Normal
0.3
CPT0076350001
Normal
0.3
CPT0088550004
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0066470004
Tumor
0.3
CPT0000870016
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0088920001
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0020120003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0088570001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0010170001
Normal
0.2
CPT0007870001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0063330001
Normal
0.2
CPT0019990003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0065430003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0086890003
Normal
0.1
CPT0001190001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0082010001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0012180003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0088630003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0000790001
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0010160003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0010120001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0078660003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0088500001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0089460004
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0086370003
Normal
0.0
CPT0077140001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0077500001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0012640003
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0085670003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0014370004
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0025920001
Normal
-0.2
CPT0078830003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0019160001
Normal
-0.2
CPT0084560003
Tumor
-0.2
CPT0015730003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0009060003
Tumor
-0.2
CPT0000780007
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0026420001
Normal
-0.2
CPT0088690003
Tumor
-0.2
CPT0079000001
Normal
-0.2
CPT0025880003
Tumor
-0.2
CPT0065930003
Tumor
-0.3
CPT0086360003
Tumor
-0.3
CPT0011240003
Tumor
-0.3
CPT0077110003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0012670003
Tumor
-0.3
CPT0001180009
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0069000003
Tumor
-0.4
CPT0007470001
Normal
-0.4
CPT0007320003
Tumor
-0.4
CPT0086830003
Normal
-0.6
CPT0069010001
Normal
-0.6
CPT0086820003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.