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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BOLA1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
30.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
26.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
22.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
21.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
21.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
21.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
18.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
18.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
18.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
17.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
16.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
15.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
15.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
14.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
14.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
14.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
13.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
13.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
11.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
10.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
10.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
10.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
10.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
8.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
7.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
7.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
7.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
7.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
3.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BOLA1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
38.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
35.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
28.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
28.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
27.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
27.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
26.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
26.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
26.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
26.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
25.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
25.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
24.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
24.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
24.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
23.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
23.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
23.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
23.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
22.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
22.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
22.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
22.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
21.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
21.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
21.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
20.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
19.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
19.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
19.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
19.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
19.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
18.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
18.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
18.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
18.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
18.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
18.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
17.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
17.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
17.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
17.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
17.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
17.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
17.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
17.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
17.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
16.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
16.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
16.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
16.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
16.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
16.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
16.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
16.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
16.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
16.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
16.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
15.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
15.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
15.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
15.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
15.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
15.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
15.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
15.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
15.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
15.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
15.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
15.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
15.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
15.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
15.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
15.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
15.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
15.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
15.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
14.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
14.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
14.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
14.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
14.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
14.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
14.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
14.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
14.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
14.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
14.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
14.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
14.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
13.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
13.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
13.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
13.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
13.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
13.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
13.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
13.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
13.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
13.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
13.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
13.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
13.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
13.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
13.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
12.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
12.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
12.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
12.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
12.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
12.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
12.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
12.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
12.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
12.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
12.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
12.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
12.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
12.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
12.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
12.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
12.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
12.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
12.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
12.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
12.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
12.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
11.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
11.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
11.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
11.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
11.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
11.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
11.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
11.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
11.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
11.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
11.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
11.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
11.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
11.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
11.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
11.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
11.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
11.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
10.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
10.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
10.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
10.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
10.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
10.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
10.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
10.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
10.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
10.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
10.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
10.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
10.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
10.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
10.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
10.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
10.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
10.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
10.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
10.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
10.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
10.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
10.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
10.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
9.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
9.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
9.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
9.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
9.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
9.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
9.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
9.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
9.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
9.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
9.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
9.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
9.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
9.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
9.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
9.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
9.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
9.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
9.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
9.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
9.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
9.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
9.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
9.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
9.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
9.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
8.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
8.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
8.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
8.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
8.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
8.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
8.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
8.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
8.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
8.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
8.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
8.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
8.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
8.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
8.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
8.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
8.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
8.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
8.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
8.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
8.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
8.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
8.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
8.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
8.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
8.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
8.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
8.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
8.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
8.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
8.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
8.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
8.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
8.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
8.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
7.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
7.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
7.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
7.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
7.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
7.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
7.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
7.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
7.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
7.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
7.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
7.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
7.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
7.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
7.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
7.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
7.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
7.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
7.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
7.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
7.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
7.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
6.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
6.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
6.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
6.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
6.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
6.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
6.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
6.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
6.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
6.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
6.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
5.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
5.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
5.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
5.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
5.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
5.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
5.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
5.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
5.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
5.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
5.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
5.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
4.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
4.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
4.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
4.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
4.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
4.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
4.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
4.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
4.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
4.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
4.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
4.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
4.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
3.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
3.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
3.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
3.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
3.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
0.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
0.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BOLA1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
28.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
27.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
26.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
25.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
24.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
20.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
20.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
19.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
19.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
18.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
18.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
18.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
17.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
17.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
17.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
17.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
17.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
16.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
16.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
16.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
16.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
16.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
16.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
16.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
16.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
16.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
15.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
14.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
13.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
13.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
13.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
13.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
12.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
12.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
12.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
12.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
12.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
11.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
11.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
11.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
11.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
11.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
11.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
11.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
11.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
11.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
10.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
10.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
10.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
9.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
8.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
8.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
8.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
7.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
7.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
7.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
6.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
6.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
6.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
5.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
4.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
2.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
2.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BOLA1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
59.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
40.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
35.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
33.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
32.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
32.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
29.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
29.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
27.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
27.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
27.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
27.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
27.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
27.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
27.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
26.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
26.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
26.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
26.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
26.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
26.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
26.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
26.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
25.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
25.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
25.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
25.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
24.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
24.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
24.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
24.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
24.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
24.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
24.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
24.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
24.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
23.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
23.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
23.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
23.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
23.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
23.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
23.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
23.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
22.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
22.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
22.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
22.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
22.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
21.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
21.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
21.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
21.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
21.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
21.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
21.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
21.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
21.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
21.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
21.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
20.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
20.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
20.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
20.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
20.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
19.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
19.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
19.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
19.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
19.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
19.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
19.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
18.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
18.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
18.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
18.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
18.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
18.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
18.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
17.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
17.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
17.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
17.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
17.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
17.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
17.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
17.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
16.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
16.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
16.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
16.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
16.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
16.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
16.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
16.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
15.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
15.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
15.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
15.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
15.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
15.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
15.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
15.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
15.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
15.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
15.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
15.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
14.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
14.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
14.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
14.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
14.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
14.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
14.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
14.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
13.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
13.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
13.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
13.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
13.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
13.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
13.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
13.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
13.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
13.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
12.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
12.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
12.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
12.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
12.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
12.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
11.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
11.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
10.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
10.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
9.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
8.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
8.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
8.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
7.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
7.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
6.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
6.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
6.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
5.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
3.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
1.1
CPT0019990003
Tumor
0.8
CPT0089460004
Tumor
0.7
CPT0015910003
Tumor
0.7
CPT0007870001
Normal
0.6
CPT0066470004
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0065870003
Tumor
0.4
CPT0010170001
Normal
0.4
CPT0015730003
Tumor
0.4
CPT0086970003
Normal
0.4
CPT0006440003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0009080003
Normal
0.4
CPT0079510001
Normal
0.4
CPT0077490003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0065450001
Normal
0.3
CPT0006900003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0087050003
Normal
0.3
CPT0089020003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0025230003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0065750003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0081620001
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0000780007
Tumor
0.2
CPT0077140001
Normal
0.2
CPT0000870016
Tumor
0.2
CPT0078940001
Normal
0.2
CPT0087040003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0019160001
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0079230003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0066480003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0018250001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0001230001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0017410003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0025350003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0025920001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0002270011
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0092800003
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0066520001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0012290003
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0088550004
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0017850003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0075560003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0012280003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0013790003
Normal
-0.2
CPT0010110003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0076330003
Tumor
-0.2
CPT0092740003
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0020120003
Tumor
-0.3
CPT0066430001
Normal
-0.3
CPT0014160003
Tumor
-0.3
CPT0006530001
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0007860003
Tumor
-0.4
CPT0026420001
Normal
-0.4
CPT0012180003
Tumor
-0.4
CPT0079410003
Tumor
-0.5
CPT0007320003
Tumor
-0.5
CPT0077320001
Normal
-0.5
CPT0078800003
Tumor
-0.6
CPT0069000003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.