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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ODF3B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
21.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
16.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
6.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
3.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
3.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
2.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
2.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
2.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
2.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
2.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
1.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
1.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ODF3B is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
221.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
134.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
78.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
78.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
76.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
74.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
73.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
70.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
61.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
60.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
60.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
58.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
57.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
56.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
55.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
54.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
53.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
52.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
51.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
50.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
50.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
49.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
49.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
49.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
48.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
48.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
47.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
46.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
46.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
45.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
45.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
45.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
45.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
45.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
44.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
42.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
41.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
41.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
41.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
40.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
40.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
40.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
40.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
39.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
39.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
39.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
39.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
39.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
39.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
39.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
39.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
38.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
38.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
38.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
38.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
38.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
38.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
38.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
38.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
38.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
38.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
38.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
37.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
37.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
37.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
36.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
36.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
36.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
36.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
36.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
35.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
35.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
35.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
35.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
34.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
34.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
34.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
34.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
34.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
34.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
33.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
33.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
33.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
33.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
33.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
33.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
32.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
32.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
32.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
32.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
32.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
31.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
31.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
31.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
31.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
31.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
31.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
31.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
31.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
31.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
30.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
30.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
30.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
30.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
30.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
30.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
30.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
30.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
30.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
29.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
29.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
29.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
29.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
28.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
28.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
28.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
28.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
28.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
28.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
28.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
28.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
28.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
28.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
28.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
28.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
28.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
28.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
28.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
28.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
28.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
27.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
27.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
27.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
27.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
27.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
27.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
27.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
27.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
26.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
26.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
26.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
26.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
26.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
26.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
26.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
26.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
26.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
26.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
26.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
26.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
26.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
25.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
25.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
25.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
25.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
25.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
25.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
25.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
25.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
25.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
25.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
24.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
24.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
24.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
24.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
24.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
24.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
24.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
24.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
23.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
23.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
23.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
23.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
23.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
23.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
23.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
22.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
22.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
22.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
22.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
22.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
22.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
22.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
22.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
22.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
22.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
22.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
22.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
22.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
22.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
22.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
22.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
22.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
22.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
21.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
21.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
21.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
21.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
21.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
21.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
21.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
21.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
21.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
21.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
21.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
21.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
21.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
21.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
21.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
21.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
21.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
21.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
20.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
20.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
20.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
20.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
20.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
20.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
20.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
20.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
20.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
20.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
20.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
20.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
20.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
20.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
20.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
20.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
20.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
19.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
19.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
19.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
19.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
19.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
19.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
19.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
19.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
18.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
18.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
18.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
18.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
18.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
18.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
18.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
18.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
18.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
18.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
18.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
18.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
18.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
18.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
18.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
18.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
18.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
18.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
18.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
18.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
18.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
18.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
17.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
17.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
17.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
17.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
17.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
17.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
17.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
17.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
17.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
17.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
17.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
17.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
16.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
16.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
16.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
16.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
16.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
16.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
16.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
16.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
16.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
16.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
16.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
16.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
16.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
16.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
15.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
15.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
15.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
15.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
15.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
15.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
15.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
15.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
15.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
15.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
15.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
15.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
15.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
15.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
15.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
15.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
15.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
14.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
14.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
14.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
14.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
14.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
14.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
14.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
14.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
14.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
14.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
14.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
14.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
14.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
14.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
14.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
14.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
14.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
14.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
13.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
13.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
13.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
13.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
13.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
13.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
13.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
13.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
13.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
13.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
13.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
13.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
12.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
12.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
12.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
12.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
12.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
12.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
12.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
12.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
12.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
12.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
12.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
12.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
11.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
11.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
11.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
11.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
11.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
11.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
11.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
10.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
10.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
10.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
10.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
10.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
10.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
10.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
10.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
10.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
10.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
9.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
9.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
8.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
8.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
8.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
8.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
7.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
7.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
6.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
6.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
6.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
6.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
6.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
5.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
5.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
5.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
4.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
4.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
3.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
3.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
3.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
2.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
2.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
2.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
0.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ODF3B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
111.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
109.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
105.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
101.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
90.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
85.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
82.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
81.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
80.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
79.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
76.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
74.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
71.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
70.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
70.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
70.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
69.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
68.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
67.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
67.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
64.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
62.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
61.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
61.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
61.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
60.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
60.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
59.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
59.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
59.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
58.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
56.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
56.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
55.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
54.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
53.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
53.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
53.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
53.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
52.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
51.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
51.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
51.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
51.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
51.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
50.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
50.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
50.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
49.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
48.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
47.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
46.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
44.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
44.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
44.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
43.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
43.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
43.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
42.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
41.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
40.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
39.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
39.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
38.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
37.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
36.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
36.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
35.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
35.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
34.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
34.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
34.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
33.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
33.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
33.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
33.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
33.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
32.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
31.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
30.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
30.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
27.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
26.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
25.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
23.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
21.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
19.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
19.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
15.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
8.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
8.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
7.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
6.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
5.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ODF3B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
134.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
125.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
102.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
102.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
100.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
92.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
81.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
74.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
71.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
69.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
68.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
62.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
59.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
58.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
56.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
55.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
53.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
51.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
51.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
47.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
47.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
47.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
46.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
45.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
45.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
44.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
44.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
44.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
44.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
43.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
42.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
42.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
42.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
40.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
39.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
38.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
38.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
38.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
37.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
37.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
37.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
36.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
36.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
36.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
36.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
36.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
35.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
35.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
35.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
35.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
35.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
35.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
34.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
34.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
34.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
34.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
33.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
33.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
33.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
32.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
32.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
32.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
31.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
31.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
31.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
31.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
31.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
30.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
30.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
30.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
30.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
30.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
30.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
30.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
29.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
29.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
29.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
29.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
29.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
29.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
29.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
29.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
29.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
29.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
28.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
28.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
28.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
28.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
28.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
28.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
27.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
27.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
27.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
27.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
27.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
27.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
26.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
26.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
26.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
26.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
26.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
26.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
25.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
25.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
25.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
25.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
25.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
25.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
24.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
24.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
24.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
24.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
24.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
24.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
24.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
24.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
24.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
24.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
24.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
24.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
23.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
23.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
23.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
23.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
23.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
23.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
23.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
22.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
22.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
22.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
22.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
22.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
22.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
21.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
21.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
20.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
20.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
20.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
20.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
20.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
19.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
19.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
19.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
19.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
19.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
19.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
18.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
18.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
18.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
18.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
17.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
17.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
17.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
17.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
17.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
17.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
17.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
17.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
16.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
16.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
15.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
15.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
15.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
14.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
14.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
14.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
14.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
13.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
13.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
13.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
13.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
13.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
13.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
12.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
12.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
11.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
11.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
11.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
10.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
10.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
10.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
10.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
10.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
10.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
10.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
10.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
10.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
10.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
9.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
9.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
9.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
9.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
8.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
8.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
8.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
8.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
8.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
8.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
7.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
7.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
7.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
7.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
7.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
7.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
7.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
6.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
6.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
5.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
5.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
5.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
4.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
4.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
4.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
3.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
3.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
3.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
3.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
3.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
3.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
3.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
2.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
2.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
2.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
2.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
2.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
1.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
1.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
1.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
1.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
