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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CHID1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
90.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
194.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
166.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
154.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
137.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
137.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
135.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
129.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
129.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
128.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
125.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
123.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
122.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
118.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
112.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
109.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
108.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
106.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
105.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
105.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
105.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
104.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
103.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
102.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
100.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
100.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
98.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
98.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
96.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
96.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
95.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
95.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
95.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
94.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
92.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
89.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
88.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
87.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
85.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
82.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
81.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
81.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
81.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
80.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
79.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
75.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
74.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
69.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
64.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
62.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
61.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
59.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
58.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
55.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
54.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
49.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
47.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
45.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
42.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
42.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
40.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
37.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
34.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
31.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CHID1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
66.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
133.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
126.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
125.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
125.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
124.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
120.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
120.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
119.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
117.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
116.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
114.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
112.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
111.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
110.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
109.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
106.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
106.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
106.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
105.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
104.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
103.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
103.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
103.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
102.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
101.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
101.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
99.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
99.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
97.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
97.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
97.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
96.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
96.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
96.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
95.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
95.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
95.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
95.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
94.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
94.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
94.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
94.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
94.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
94.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
94.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
93.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
93.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
93.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
93.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
92.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
92.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
92.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
92.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
91.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
90.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
90.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
90.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
90.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
89.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
89.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
89.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
88.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
88.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
88.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
88.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
87.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
87.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
87.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
87.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
87.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
87.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
86.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
86.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
86.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
86.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
86.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
85.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
85.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
85.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
85.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
85.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
85.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
85.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
85.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
84.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
84.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
84.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
84.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
84.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
84.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
84.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
83.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
83.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
83.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
83.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
83.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
83.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
83.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
82.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
82.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
82.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
82.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
81.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
81.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
81.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
81.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
81.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
81.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
81.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
80.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
80.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
80.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
80.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
80.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
80.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
80.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
80.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
80.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
80.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
79.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
79.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
79.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
79.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
79.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
79.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
79.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
79.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
79.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
79.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
79.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
79.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
78.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
78.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
78.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
78.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
78.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
78.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
77.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
77.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
77.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
77.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
77.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
77.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
77.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
77.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
76.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
76.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
76.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
75.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
75.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
75.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
75.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
74.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
74.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
74.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
74.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
74.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
74.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
74.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
74.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
74.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
74.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
74.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
73.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
73.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
73.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
73.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
73.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
73.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
73.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
73.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
73.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
73.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
72.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
72.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
72.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
72.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
72.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
72.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
72.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
72.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
72.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
72.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
72.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
72.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
71.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
71.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
71.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
71.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
71.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
71.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
71.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
71.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
71.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
71.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
70.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
70.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
70.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
70.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
70.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
70.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
70.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
70.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
70.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
70.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
70.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
70.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
69.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
69.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
69.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
69.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
69.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
69.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
69.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
69.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
68.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
68.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
68.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
68.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
68.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
68.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
68.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
68.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
67.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
67.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
67.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
67.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
67.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
67.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
67.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
67.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
67.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
67.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
67.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
67.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
67.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
67.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
66.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
66.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
66.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
66.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
66.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
66.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
66.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
66.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
66.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
66.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
66.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
66.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
66.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
65.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
65.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
65.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
65.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
65.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
65.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
65.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
65.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
65.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
65.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
64.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
64.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
64.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
64.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
64.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
64.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
64.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
64.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
64.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
64.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
63.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
63.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
63.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
63.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
63.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
63.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
63.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
63.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
63.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
63.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
62.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
62.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
62.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
62.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
62.5
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
62.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
62.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
62.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
62.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
61.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
61.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
61.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
61.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
61.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
61.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
61.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
61.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
61.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
61.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
61.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
61.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
61.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
61.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
61.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
61.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
60.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
60.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
60.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
60.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
60.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
60.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
60.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
60.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
60.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
60.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
60.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
60.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
60.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
60.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
59.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
59.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
59.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
59.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
59.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
59.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
59.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
59.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
59.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
59.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
59.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
59.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
58.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
58.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
58.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
58.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
58.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
58.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
58.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
57.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
57.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
57.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
57.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
57.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
57.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
57.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
57.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
57.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
57.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
57.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
57.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
56.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
56.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
56.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
56.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
56.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
56.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
56.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
56.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
56.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
56.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
56.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
56.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
55.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
55.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
55.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
55.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
55.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
55.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
55.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
55.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
55.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
55.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
54.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
54.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
54.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
54.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
54.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
54.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
54.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
54.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
53.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
53.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
53.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
53.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
53.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
53.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
53.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
53.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
53.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
53.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
53.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
53.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
53.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
53.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
53.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
52.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
52.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
52.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
52.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
52.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
52.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
52.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
52.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
52.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
52.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
51.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
51.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
51.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
51.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
51.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
51.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
51.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
51.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
51.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
51.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
50.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
50.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
50.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
50.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
50.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
50.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
50.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
49.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
49.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
49.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
49.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
49.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
48.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
48.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
48.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
48.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
48.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
48.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
48.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
47.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
47.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
47.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
47.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
47.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
47.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
47.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
47.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
47.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
47.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
47.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
47.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
47.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
46.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
46.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
46.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
46.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
46.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
46.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
46.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
46.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
46.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
46.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
45.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
45.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
45.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
45.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
45.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
44.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
44.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
44.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
44.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
43.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
43.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
43.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
43.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
43.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
42.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
42.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
42.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
42.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
41.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
41.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
41.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
41.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
41.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
41.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
40.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
40.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
40.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
40.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
39.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
39.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
39.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
38.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
38.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
38.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
37.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
37.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
37.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
37.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
36.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
36.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
35.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
35.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
34.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
34.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
33.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
33.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
33.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
31.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
31.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
29.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
29.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
29.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
28.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
27.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
26.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
26.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
26.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
25.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
23.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
22.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
19.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
10.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CHID1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
62.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
146.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
141.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
132.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
107.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
99.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
90.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
89.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
89.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
85.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
84.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
83.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
83.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
82.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
80.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
78.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
77.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
75.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
75.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
74.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
70.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
69.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
68.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
67.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
67.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
67.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
67.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
66.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
66.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
65.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
64.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
64.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
64.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
64.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
63.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
63.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
63.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
63.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
63.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
63.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
63.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
62.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
62.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
62.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
61.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
61.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
61.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
60.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
59.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
59.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
59.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
59.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
59.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
58.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
58.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
58.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
58.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
58.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
57.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
57.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
57.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
57.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
57.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
56.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
56.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
56.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
56.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
55.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
55.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
55.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
55.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
54.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
52.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
52.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
52.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
51.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
50.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
49.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
49.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
48.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
48.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
46.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
46.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
45.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
45.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
43.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
43.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
42.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
40.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
40.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
40.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
39.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
38.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
35.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
35.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
35.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
35.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
34.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
34.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CHID1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
87.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
221.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
182.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
175.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
173.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
170.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
160.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
158.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
149.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
148.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
144.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
144.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
144.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
143.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
136.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
131.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
129.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
127.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
126.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
125.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
125.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
125.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
123.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
122.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
121.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
121.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
120.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
120.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
120.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
119.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
118.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
117.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
117.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
117.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
116.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
116.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
116.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
116.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
115.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
115.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
114.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
114.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
113.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
112.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
112.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
112.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
112.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
112.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
111.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
111.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
111.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
111.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
110.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
110.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
109.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
107.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
107.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
106.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
106.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
106.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
106.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
105.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
105.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
105.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
104.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
103.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
103.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
103.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
102.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
102.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
102.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
100.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
100.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
100.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
99.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
99.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
99.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
99.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
99.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
99.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
98.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
98.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
98.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
97.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
97.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
97.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
97.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
97.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
97.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
96.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
96.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
95.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
95.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
95.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
95.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
95.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
95.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
95.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
95.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
94.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
94.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
94.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
94.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
94.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
93.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
93.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
93.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
93.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
93.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
93.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
92.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
91.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
91.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
91.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
90.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
89.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
89.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
89.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
89.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
89.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
89.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
88.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
88.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
88.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
88.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
88.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
88.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
88.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
88.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
87.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
87.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
87.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
87.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
87.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
87.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
87.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
86.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
86.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
85.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
85.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
85.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
84.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
84.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
83.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
83.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
83.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
83.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
83.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
83.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
83.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
83.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
83.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
83.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
82.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
82.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
82.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
82.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
82.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
81.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
81.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
81.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
81.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
80.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
80.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
80.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
80.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
80.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
80.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
80.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
79.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
79.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
79.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
79.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
79.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
79.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
79.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
78.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
78.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
78.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
77.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
77.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
77.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
76.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
76.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
76.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
76.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
75.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
75.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
75.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
74.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
74.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
74.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
74.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
74.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
73.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
73.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
73.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
73.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
73.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
72.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
72.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
72.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
72.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
71.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
71.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
71.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
70.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
70.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
69.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
69.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
69.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
69.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
68.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
68.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
67.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
67.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
67.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
67.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
67.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
67.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
67.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
67.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
66.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
66.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
66.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
66.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
66.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
65.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
65.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
65.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
65.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
64.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
64.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
64.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
63.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
63.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
63.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
63.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
63.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
62.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
61.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
60.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
60.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
60.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
59.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
59.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
59.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
58.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
58.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
57.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
56.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
56.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
55.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
55.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
54.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
53.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
53.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
53.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
52.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
51.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
50.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
49.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
49.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
48.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
46.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
45.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
43.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
43.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
39.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
39.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
39.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
37.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
37.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
36.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
36.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
34.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
33.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
32.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
30.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
26.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
25.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
24.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
23.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
0.8
CPT0078800003
Tumor
0.7
CPT0011410003
Tumor
0.6
CPT0025110003
Tumor
0.6
CPT0079270003
Tumor
0.6
CPT0002350011
Tumor
0.6
CPT0088550004
Tumor
0.5
CPT0076330003
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0025060001
Normal
0.4
CPT0006730001
Normal
0.4
CPT0012570003
Normal
0.4
CPT0015730003
Tumor
0.4
CPT0023710001
Normal
0.4
CPT0065450001
Normal
0.3
CPT0064370003
Tumor
0.3
CPT0001190001
Normal
0.3
CPT0077140001
Normal
0.3
CPT0001350001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0069010001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0001500009
Tumor
0.3
CPT0014350001
Normal
0.3
CPT0012290003
Normal
0.3
CPT0000890001
Normal
0.3
CPT0088780001
Normal
0.3
CPT0026420001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0020130001
Normal
0.3
CPT0084590001
Normal
0.3
CPT0000660001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0017450001
Normal
0.3
CPT0064400001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0066430001
Normal
0.3
CPT0075570001
Normal
0.3
CPT0092800003
Normal
0.3
CPT0075170001
Normal
0.3
CPT0000790001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0007870001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0019130003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0001230001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0078840001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0013790003
Normal
0.2
CPT0089480003
Normal
0.2
CPT0088920001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0084560003
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0063640001
Normal
0.2
CPT0066520001
Normal
0.2
CPT0092160003
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0063330001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0001550001
Normal
0.2
CPT0092190003
Normal
0.2
CPT0077500001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0081620001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0009080003
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0086970003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0001270001
Normal
0.1
CPT0012180003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0079300001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0077320001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0065820001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0079180003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0078830003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0006630003
Tumor
-0.2
CPT0069000003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0001260009
Tumor
-0.2
CPT0012370003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0066480003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0012550003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0026410003
Tumor
-0.3
CPT0012900004
Tumor
-0.3
CPT0023350003
Tumor
-0.3
CPT0088970003
Tumor
-0.4
CPT0081880003
Tumor
-0.4
CPT0009060003
Tumor
-0.4
CPT0001540009
Tumor
-0.4
CPT0024670003
Tumor
-0.4
CPT0017410003
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0000640003
Tumor
-0.4
CPT0010160003
Tumor
-0.4
CPT0086030003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0088690003
Tumor
-0.4
CPT0077310003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0018250001
Normal
-0.4
CPT0081600003
Tumor
-0.5
CPT0000780007
Tumor
-0.5
CPT0088480003
Tumor
-0.5
CPT0025230003
Tumor
-0.5
CPT0015810003
Tumor
-0.6
CPT0009000003
Tumor
-0.6
CPT0014450004
Tumor
-0.7
CPT0077490003
Tumor
-0.7
CPT0025050003
Tumor
-0.8
CPT0012080003
Tumor
-0.8
CPT0021240003
Tumor
-0.9
CPT0017850003
Tumor
-1.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.