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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AGTRAP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
90.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
72.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
57.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
50.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
47.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
46.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
43.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
43.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
35.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
31.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
29.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
29.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
27.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
26.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
24.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
24.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
23.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
23.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
23.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
22.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
21.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
20.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
20.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
19.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
19.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
18.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
17.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
17.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
16.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
15.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
14.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
14.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
13.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
13.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
12.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
12.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
12.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
12.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
12.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
11.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
10.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
9.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
8.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
6.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
5.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
3.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AGTRAP is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
223.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
118.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
110.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
109.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
108.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
107.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
107.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
105.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
104.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
102.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
99.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
99.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
99.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
97.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
96.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
96.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
96.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
94.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
94.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
93.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
93.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
89.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
89.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
89.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
89.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
88.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
88.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
88.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
87.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
87.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
86.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
86.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
85.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
85.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
84.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
84.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
83.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
81.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
81.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
81.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
81.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
80.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
80.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
80.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
79.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
79.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
79.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
79.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
79.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
79.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
78.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
78.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
78.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
78.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
77.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
77.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
76.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
76.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
76.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
76.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
76.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
76.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
75.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
75.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
74.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
74.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
74.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
74.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
74.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
73.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
73.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
73.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
73.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
73.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
73.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
72.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
72.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
72.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
72.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
72.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
72.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
71.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
71.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
71.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
71.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
71.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
71.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
70.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
70.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
70.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
70.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
70.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
70.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
70.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
69.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
69.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
69.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
69.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
68.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
68.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
68.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
68.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
68.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
68.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
68.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
68.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
67.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
67.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
67.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
67.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
67.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
67.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
66.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
66.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
66.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
66.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
66.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
66.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
66.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
66.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
65.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
65.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
65.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
65.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
65.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
65.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
65.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
65.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
65.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
65.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
65.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
65.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
65.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
64.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
64.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
64.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
64.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
64.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
64.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
64.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
63.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
63.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
63.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
63.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
63.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
63.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
63.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
63.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
63.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
63.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
62.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
62.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
62.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
62.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
62.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
62.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
62.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
62.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
62.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
61.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
61.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
61.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
61.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
61.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
61.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
61.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
61.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
61.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
61.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
61.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
60.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
60.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
60.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
60.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
60.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
60.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
60.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
60.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
60.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
60.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
60.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
60.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
59.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
59.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
59.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
59.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
59.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
59.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
59.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
59.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
59.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
59.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
59.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
59.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
59.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
59.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
59.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
59.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
59.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
58.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
58.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
58.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
58.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
58.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
58.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
58.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
57.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
57.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
57.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
57.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
57.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
57.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
57.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
57.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
57.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
57.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
57.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
57.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
57.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
57.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
57.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
56.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
56.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
56.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
56.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
56.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
56.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
56.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
56.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
56.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
56.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
56.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
56.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
56.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
56.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
55.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
55.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
55.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
55.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
55.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
55.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
55.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
55.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
55.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
55.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
55.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
55.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
55.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
54.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
54.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
54.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
54.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
54.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
53.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
53.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
53.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
53.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
53.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
53.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
53.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
53.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
53.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
53.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
53.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
53.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
53.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
53.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
53.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
53.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
53.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
52.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
52.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
52.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
52.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
52.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
52.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
52.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
52.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
52.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
51.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
51.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
51.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
51.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
51.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
51.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
51.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
50.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
50.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
50.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
50.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
50.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
50.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
50.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
50.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
50.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
50.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
50.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
50.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
50.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
50.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
50.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
49.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
49.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
49.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
49.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
49.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
49.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
49.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
49.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
49.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
48.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
48.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
48.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
48.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
48.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
48.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
48.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
48.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
48.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
48.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
48.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
47.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
47.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
47.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
47.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
47.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
47.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
47.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
47.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
47.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
47.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
47.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
46.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
46.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
46.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
46.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
46.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
46.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
46.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
46.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
46.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
46.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
46.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
46.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
46.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
46.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
46.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
45.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
45.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
45.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
45.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
45.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
45.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
45.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
45.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
45.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
45.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
45.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
45.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
45.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
45.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
45.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
44.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
44.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
44.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
44.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
44.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
44.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
44.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
44.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
44.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
44.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
44.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
44.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
44.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
44.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
44.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
44.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
43.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
43.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
43.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
43.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
43.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
43.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
42.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
42.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
42.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
42.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
42.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
42.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
42.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
42.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
42.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
42.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
42.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
42.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
42.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
42.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
41.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
41.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
41.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
41.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
41.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
41.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
41.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
41.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
40.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
40.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
40.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
40.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
40.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
40.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
40.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
40.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
39.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
39.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
39.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
39.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
39.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
39.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
39.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
39.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
39.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
39.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
39.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
39.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
38.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
38.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
38.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
38.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
38.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
38.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
38.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
38.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
38.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
37.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
37.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
37.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
37.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
37.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
37.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
37.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
37.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
37.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
37.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
37.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
37.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
37.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
36.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
36.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
36.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
36.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
36.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
35.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
35.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
35.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
35.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
35.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
35.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
35.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
34.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
34.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
34.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
34.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
34.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
34.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
34.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
33.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
33.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
33.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
33.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
33.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
32.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
32.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
32.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
32.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
32.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
31.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
31.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
31.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
31.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
30.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
30.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
29.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
29.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
29.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
29.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
29.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
29.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
28.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
28.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
26.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
26.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
26.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
25.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
25.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
22.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
21.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
21.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
20.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
19.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
17.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
16.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
16.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
15.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
14.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
9.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
9.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
8.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
4.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
4.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AGTRAP is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
147.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
128.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
126.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
109.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
96.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
89.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
85.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
84.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
83.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
82.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
77.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
76.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
74.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
73.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
72.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
71.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
70.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
69.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
68.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
68.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
67.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
67.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
66.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
66.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
63.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
61.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
61.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
61.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
60.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
59.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
59.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
58.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
57.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
56.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
56.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
55.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
55.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
55.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
55.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
55.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
55.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
54.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
54.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
53.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
52.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
52.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
52.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
51.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
51.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
51.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
50.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
50.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
49.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
49.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
48.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
47.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
47.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
47.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
46.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
46.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
46.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
45.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
45.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
45.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
45.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
44.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
44.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
44.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
44.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
42.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
42.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
41.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
41.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
41.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
40.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
40.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
40.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
39.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
39.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
38.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
38.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
38.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
38.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
37.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
35.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
35.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
34.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
33.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
32.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
31.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
28.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
23.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
23.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
21.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
19.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AGTRAP is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
82.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
190.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
179.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
174.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
165.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
154.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
151.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
148.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
146.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
144.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
138.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
137.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
136.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
136.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
135.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
135.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
133.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
131.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
128.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
127.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
126.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
126.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
124.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
124.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
121.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
119.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
119.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
119.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
118.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
118.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
116.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
116.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
115.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
115.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
115.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
114.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
114.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
114.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
113.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
113.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
113.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
112.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
111.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
111.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
110.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
110.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
110.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
110.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
109.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
109.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
109.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
108.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
107.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
106.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
106.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
106.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
104.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
104.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
104.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
102.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
100.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
100.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
99.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
98.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
98.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
98.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
98.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
98.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
98.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
97.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
97.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
97.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
97.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
96.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
96.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
96.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
96.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
96.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
95.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
95.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
95.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
95.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
95.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
95.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
95.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
94.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
94.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
94.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
94.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
93.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
92.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
92.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
91.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
91.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
91.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
90.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
90.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
90.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
89.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
89.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
89.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
89.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
89.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
88.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
87.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
86.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
86.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
86.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
86.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
86.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
86.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
85.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
85.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
85.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
85.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
85.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
85.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
85.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
84.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
84.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
84.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
84.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
84.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
83.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
83.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
83.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
83.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
82.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
82.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
82.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
82.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
81.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
81.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
81.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
80.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
80.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
80.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
79.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
79.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
79.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
79.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
78.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
78.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
78.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
78.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
77.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
77.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
77.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
77.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
77.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
76.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
76.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
76.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
76.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
75.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
75.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
75.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
75.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
74.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
74.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
74.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
74.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
73.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
73.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
72.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
72.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
72.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
72.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
72.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
72.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
71.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
71.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
71.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
71.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
70.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
70.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
70.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
70.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
70.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
70.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
70.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
70.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
69.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
69.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
69.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
69.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
68.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
68.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
68.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
68.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
68.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
67.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
67.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
67.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
67.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
67.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
66.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
66.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
66.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
66.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
66.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
66.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
66.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
65.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
65.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
65.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
65.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
64.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
64.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
64.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
64.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
63.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
63.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
62.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
62.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
62.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
62.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
61.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
61.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
60.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
60.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
60.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
60.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
60.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
60.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
60.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
59.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
59.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
59.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
58.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
58.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
58.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
58.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
58.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
58.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
56.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
56.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
56.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
56.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
56.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
55.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
55.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
54.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
54.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
54.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
53.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
53.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
53.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
52.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
52.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
52.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
52.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
51.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
50.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
50.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
50.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
50.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
49.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
48.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
48.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
47.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
46.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
44.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
44.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
43.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
42.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
41.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
40.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
40.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
40.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
40.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
40.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
39.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
38.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
38.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
37.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
29.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
23.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
22.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
19.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
6.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0089460004
Tumor
1.8
CPT0078930003
Tumor
1.6
CPT0025050003
Tumor
1.4
CPT0002270011
Tumor
1.1
CPT0024670003
Tumor
0.9
CPT0092740003
Normal
0.9
CPT0086950003
Tumor
0.9
CPT0086820003
Tumor
0.9
CPT0015810003
Tumor
0.7
CPT0011410003
Tumor
0.7
CPT0065750003
Tumor
0.7
CPT0079430001
Normal
0.7
CPT0087050003
Normal
0.7
CPT0001180009
Tumor
0.7
CPT0076350001
Normal
0.7
CPT0025060001
Normal
0.6
CPT0002350011
Tumor
0.6
CPT0001500009
Tumor
0.6
CPT0064370003
Tumor
0.6
CPT0001350001
Normal
0.6
CPT0019130003
Tumor
0.5
CPT0023360001
Normal
0.5
CPT0092790003
Tumor
0.5
CPT0088780001
Normal
0.5
CPT0079410003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0088710001
Normal
0.4
CPT0078840001
Normal
0.4
CPT0012180003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0012770003
Normal
0.4
CPT0063640001
Normal
0.4
CPT0001190001
Normal
0.4
CPT0065690003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0013790003
Normal
0.4
CPT0065810003
Tumor
0.3
CPT0023710001
Normal
0.3
CPT0086360003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0018250001
Normal
0.3
CPT0079230003
Tumor
0.3
CPT0006730001
Normal
0.3
CPT0063630003
Tumor
0.3
CPT0007470001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0012290003
Normal
0.3
CPT0014160003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0015730003
Tumor
0.3
CPT0081880003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0077110003
Tumor
0.2
CPT0006950001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0026420001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0092800003
Normal
0.2
CPT0017450001
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0012570003
Normal
0.1
CPT0066430001
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0001340003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0089480003
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0075570001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0014370004
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0088480003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0025880003
Tumor
-0.1
CPT0081600003
Tumor
-0.1
CPT0069160003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0069190001
Normal
-0.2
CPT0001220008
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0085670003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0025920001
Normal
-0.2
CPT0012550003
Tumor
-0.2
CPT0071150004
Tumor
-0.2
CPT0078510003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0079000001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0075720003
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0078990003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0092290003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0026410003
Tumor
-0.3
CPT0088500001
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0015910003
Tumor
-0.4
CPT0009020003
Normal
-0.4
CPT0077320001
Normal
-0.4
CPT0017850003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0077490003
Tumor
-0.4
CPT0007860003
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0081990003
Tumor
-0.4
CPT0025110003
Tumor
-0.5
CPT0009060003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0000660001
Normal
-0.5
CPT0001260009
Tumor
-0.5
CPT0075560003
Tumor
-0.5
CPT0002370001
Normal
-0.6
CPT0017410003
Tumor
-0.6
CPT0023690003
Tumor
-0.6
CPT0092730003
Tumor
-0.6
CPT0087040003
Tumor
-0.7
CPT0012640003
Normal
-0.7
CPT0006630003
Tumor
-0.7
CPT0069000003
Tumor
-0.7
CPT0001230001
Normal
-0.7
CPT0088920001
Normal
-0.7
CPT0079300001
Normal
-0.8
CPT0012080003
Tumor
-0.9
CPT0065870003
Tumor
-0.9
CPT0079180003
Tumor
-0.9
CPT0079510001
Normal
-0.9
CPT0011240003
Tumor
-1.0
CPT0088570001
Normal
-1.1
CPT0014470001
Normal
-1.1
CPT0088630003
Tumor
-1.1
CPT0084560003
Tumor
-1.3
CPT0088550004
Tumor
-1.4
CPT0088970003
Tumor
-1.5
CPT0088900003
Tumor
-1.5
CPT0078660003
Tumor
-1.6
CPT0014450004
Tumor
-1.7
CPT0079270003
Tumor
-1.9
CPT0000790001
Normal
N/A
CPT0066480003
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0065450001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0001540009
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.