HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:14.5 nTPM
HPA Brain:20.8 nTPM
GTEx:14.5 nTPM
FANTOM5:11.8 Scaled Tags Per Million
Pig:6.8 nTPM
Mouse:2.2 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 20.8
Sample id Sample description nTPM
Hippocampus
nTPM: 20.6
2148 Female, age 91, left hemisphere 22.9
1855 Male, age 76, left hemisphere 21.2
2529 Female, age 94, left hemisphere 21.2
1911 Female, age 85, right hemisphere 20.4
1898 Male, age 80, left hemisphere 19.1
2621 Female, age 67, right hemisphere 18.6
Dentate gyrus
nTPM: 19.6
2010 Male, age 76, both hemispheres 27.1
2528 Male, age 74, both hemispheres 21.6
2246 Female, age 85, both hemispheres 19.4
2530 Female, age 94, left hemisphere 17.6
1927 Female, age 91, both hemispheres 16.7
2531 Female, age 67, both hemispheres 15.4
Entorhinal gyrus
nTPM: 16.9
2117 Female, age 91, right hemisphere 23.6
1787 Male, age 76, left hemisphere 22.5
1938 Female, age 85, left hemisphere 16.4
2686 Male, age 75, right hemisphere 15.1
2764 Male, age 80, right hemisphere 13.1
2613 Female, age 94, left hemisphere 10.6
Hippocampus, CA1
nTPM: 20.7
2082 Female, age 91, right hemisphere 30.6
1873 Female, age 85, both hemispheres 19.8
2045 Male, age 76, both hemispheres 19.3
2527 Male, age 74, both hemispheres 17.0
2749 Male, age 80, left hemisphere 16.8
Hippocampus, CA2
nTPM: 20.8
1940 Female, age 85, left hemisphere 27.3
2113 Female, age 91, right hemisphere 25.8
2249 Male, age 74, both hemispheres 24.6
1963 Male, age 80, left hemisphere 19.3
2437 Female, age 94, left hemisphere 15.5
1892 Male, age 76, both hemispheres 12.1
Hippocampus, CA3
nTPM: 17.8
2436 Male, age 74, both hemispheres 22.4
1867 Male, age 76, both hemispheres 19.4
1891 Female, age 85, both hemispheres 18.8
2861 Female, age 67, both hemispheres 17.7
2137 Male, age 80, left hemisphere 15.5
2620 Female, age 94, left hemisphere 13.0
Parahippocampal cortex
nTPM: 16.2
2018 Male, age 76, both hemispheres 22.5
2692 Male, age 74, both hemispheres 18.3
2250 Female, age 67, right hemisphere 17.4
1990 Female, age 91, right hemisphere 16.3
2622 Female, age 67, right hemisphere 15.9
2532 Female, age 72, left hemisphere 15.7
1850 Male, age 80, both hemispheres 14.9
2245 Female, age 91, both hemispheres 14.8
1933 Female, age 85, both hemispheres 14.6
2693 Female, age 94, both hemispheres 11.6
Perirhinal gyrus
nTPM: 13.6
1847 Female, age 91, left hemisphere 14.4
2848 Male, age 76, right hemisphere 13.7
2521 Female, age 94, right hemisphere 13.5
1794 Male, age 80, right hemisphere 13.3
1841 Female, age 85, right hemisphere 13.1
Subiculum
nTPM: 18.8
2729 Female, age 91, right hemisphere 26.3
2042 Male, age 76, both hemispheres 22.2
2619 Male, age 74, both hemispheres 17.3
1901 Male, age 80, both hemispheres 17.0
2438 Female, age 94, left hemisphere 16.2
1977 Female, age 85, both hemispheres 13.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.5
Samples: 197

Max nTPM: 65.5
Min nTPM: 2.7
Std nTPM: 9.8
Median nTPM: 11.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 65.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 56.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 49.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 48.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 41.6
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 40.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 40.3
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 40.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 39.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 36.9
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 32.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 11.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.8
FF:10169-103B7 60 years, female 12.4
FF:10153-102I9 76 years, female 11.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 6.8
Pig sample Sample description nTPM
Subiculum
nTPM: 5.9
Samples: 4

Max nTPM: 7.1
Min nTPM: 4.7
Sample A Female 6.4
Sample B Female 5.4
Sample C Male 4.7
Sample D Male 7.1
Dorsal hippocampus
nTPM: 6.8
Samples: 4

Max nTPM: 8.9
Min nTPM: 3.4
Sample A Female 8.9
Sample B Female 6.5
Sample C Male 8.2
Sample D Male 3.4
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 4.8
Min nTPM: 2.8
Sample A Female 4.7
Sample B Female 4.2
Sample C Male 4.8
Sample D Male 2.8
Ventral hippocampus
nTPM: 6.7
Samples: 4

Max nTPM: 7.9
Min nTPM: 5.6
Sample A Female 6.3
Sample B Female 5.6
Sample C Male 7.0
Sample D Male 7.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 2.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.3
Samples: 4

Max nTPM: 1.8
Min nTPM: 1.1
Sample A Male 1.8
Sample B Male 1.1
Sample C Female 1.3
Sample D Female 1.1
Hippocampal formation
nTPM: 2.2
Samples: 4

Max nTPM: 2.7
Min nTPM: 1.7
Sample A Male 1.7
Sample B Male 1.9
Sample C Female 2.6
Sample D Female 2.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68203434 Antisense, RP_041018_01_A08, Mouse strain C57BL/6J (56 days, male) 0.7
67850949 Antisense, RP_041018_01_A08, Mouse strain C57BL/6J (56 days, male) 0.3

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