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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MTHFR is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
11.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
10.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
10.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
10.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
9.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
9.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
9.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
8.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
8.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
7.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
7.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
6.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
6.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
6.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
6.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
5.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
5.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
5.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
5.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
5.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
5.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
4.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
4.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
4.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
4.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
4.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
4.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
3.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
3.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
3.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
3.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
2.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MTHFR is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
25.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
25.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
24.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
23.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
23.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
23.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
22.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
22.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
22.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
22.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
21.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
21.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
20.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
20.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
20.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
20.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
20.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
20.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
20.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
19.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
19.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
19.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
19.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
19.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
18.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
18.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
17.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
17.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
17.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
17.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
17.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
17.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
17.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
16.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
16.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
16.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
16.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
16.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
16.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
15.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
15.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
15.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
15.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
15.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
15.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
15.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
14.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
14.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
14.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
14.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
14.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
14.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
14.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
14.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
14.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
14.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
14.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
14.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
14.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
14.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
14.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
14.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
13.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
13.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
13.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
13.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
13.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
13.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
13.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
13.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
13.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
13.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
13.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
12.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
12.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
12.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
12.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
12.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
12.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
12.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
12.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
12.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
12.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
12.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
12.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
12.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
12.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
11.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
11.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
11.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
11.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
11.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
11.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
11.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
11.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
11.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
11.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
11.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
11.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
11.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
11.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
11.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
11.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
11.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
11.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
11.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
11.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
11.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
11.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
11.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
11.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
11.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
11.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
11.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
10.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
10.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
10.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
10.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
10.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
10.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
10.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
10.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
10.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
10.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
10.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
10.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
10.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
10.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
10.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
10.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
10.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
10.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
10.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
10.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
10.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
10.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
9.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
9.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
9.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
9.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
9.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
9.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
9.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
9.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
9.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
9.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
9.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
9.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
9.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
9.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
9.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
9.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
9.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
9.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
9.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
9.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
9.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
9.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
9.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
9.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
9.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
9.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
8.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
8.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
8.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
8.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
8.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
8.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
8.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
8.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
8.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
8.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
8.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
8.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
8.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
8.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
8.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
8.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
8.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
8.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
8.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
8.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
8.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
8.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
8.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
8.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
8.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
8.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
8.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
8.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
8.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
7.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
7.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
7.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
7.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
7.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
7.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
7.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
7.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
7.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
7.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
7.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
7.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
7.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
7.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
7.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
7.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
7.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
7.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
7.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
7.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
7.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
7.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
7.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
7.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
6.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
6.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
6.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
6.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
6.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
6.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
6.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
6.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
6.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
6.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
6.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
6.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
6.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
6.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
6.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
6.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
6.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
6.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
6.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
6.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
6.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
6.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
6.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
6.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
6.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
6.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
6.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
5.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
5.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
5.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
5.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
5.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
5.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
5.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
5.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
5.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
5.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
5.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
5.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
5.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
5.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
5.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
5.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
5.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
5.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
5.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
5.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
5.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
5.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
5.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
5.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
5.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
5.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
5.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
5.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
5.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
5.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
4.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
4.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
4.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
4.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
4.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
4.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
4.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
4.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
4.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
4.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
4.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
4.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
4.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
4.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
4.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
4.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
4.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
4.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
4.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
4.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
4.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
4.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
4.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
4.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
4.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
4.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
4.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
4.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
4.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
4.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
4.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
4.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
4.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
4.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
4.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
3.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
3.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
3.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
3.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
3.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
3.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
3.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
3.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
3.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
3.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
2.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
2.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
2.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
2.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
2.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
2.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
2.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
2.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
2.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
2.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
2.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
2.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
2.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
2.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MTHFR is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
36.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
31.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
26.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
25.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
25.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
24.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
24.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
22.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
20.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
20.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
20.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
19.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
18.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
17.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
17.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
16.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
15.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
15.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
14.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
14.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
14.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
14.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
13.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
13.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
13.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
13.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
12.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
12.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
12.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
11.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
11.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
11.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
11.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
10.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
10.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
10.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
10.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
10.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
10.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
10.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
10.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
10.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
10.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
9.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
9.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
9.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
8.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
8.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
8.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
7.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
7.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
7.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
7.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
6.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
6.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
6.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
5.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
5.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
5.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
5.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
5.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
5.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
5.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
3.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
3.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MTHFR is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
46.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
43.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
41.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
37.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
37.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
34.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
31.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
31.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
28.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
25.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
25.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
25.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
24.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
23.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
22.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
22.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
22.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
22.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
21.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
21.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
21.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
21.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
21.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
21.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
20.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
20.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
19.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
19.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
19.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
19.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
18.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
18.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
18.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
18.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
18.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
17.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
17.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
17.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
17.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
17.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
17.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
17.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
16.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
16.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
16.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
16.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
16.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
16.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
16.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
16.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
16.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
16.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
15.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
15.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
15.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
15.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
15.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
15.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
15.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
14.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
14.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
14.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
14.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
14.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
13.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
13.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
13.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
13.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
13.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
13.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
12.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
12.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
12.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
12.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
12.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
12.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
11.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
11.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
11.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
11.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
11.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
11.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
11.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
11.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
11.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
10.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
10.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
10.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
10.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
10.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
10.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
10.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
10.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
10.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
9.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
9.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
9.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
9.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
9.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
9.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
9.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
9.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
8.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
8.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
8.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
8.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
8.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
8.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
8.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
8.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
8.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
8.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
8.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
7.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
7.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
7.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
7.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
7.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
7.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
7.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
7.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
7.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
6.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
6.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
6.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
6.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
6.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
6.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
6.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
6.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
6.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
6.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
6.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
6.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
6.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
5.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
5.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
5.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
5.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
5.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
5.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
5.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
5.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
5.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
5.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
4.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
4.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
4.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
4.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
4.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
4.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
4.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
4.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
4.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
4.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
3.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
3.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
3.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
3.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
3.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
3.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
3.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
3.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
2.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
2.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
2.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
1.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
1.4
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001500009
Tumor
0.9
CPT0077110003
Tumor
0.9
CPT0078800003
Tumor
0.8
CPT0006440003
Tumor
0.8
CPT0000640003
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0065430003
Tumor
0.7
CPT0012180003
Tumor
0.6
CPT0000780007
Tumor
0.6
CPT0065810003
Tumor
0.6
CPT0089460004
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0001540009
Tumor
0.6
CPT0006900003
Tumor
0.5
CPT0076350001
Normal
0.5
CPT0079480003
Tumor
0.5
CPT0002270011
Tumor
0.5
CPT0006950001
Normal
0.5
CPT0000870016
Tumor
0.5
CPT0078990003
Tumor
0.4
CPT0092800003
Normal
0.4
CPT0010160003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0025060001
Normal
0.4
CPT0025290003
Tumor
0.4
CPT0012570003
Normal
0.4
CPT0012900004
Tumor
0.4
CPT0065450001
Normal
0.4
CPT0000790001
Normal
0.4
CPT0009000003
Tumor
0.4
CPT0000890001
Normal
0.4
CPT0019990003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0012090003
Normal
0.3
CPT0010170001
Normal
0.3
CPT0078830003
Tumor
0.3
CPT0014130001
Normal
0.3
CPT0077140001
Normal
0.3
CPT0064400001
Normal
0.3
CPT0020020001
Normal
0.2
CPT0086950003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0077490003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0089480003
Normal
0.2
CPT0023710001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0001260009
Tumor
0.2
CPT0086370003
Normal
0.2
CPT0086970003
Normal
0.2
CPT0007860003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0000660001
Normal
0.1
CPT0088970003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0066480003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0017410003
Tumor
0.0
CPT0024670003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0086820003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0075130003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0082010001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0078670001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0025230003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0092290003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0081990003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0079230003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0014350001
Normal
-0.2
CPT0021240003
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0088920001
Normal
-0.3
CPT0025170003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0089040001
Normal
-0.3
CPT0088550004
Tumor
-0.3
CPT0013790003
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0079410003
Tumor
-0.3
CPT0069160003
Tumor
-0.3
CPT0015730003
Tumor
-0.3
CPT0018250001
Normal
-0.3
CPT0015910003
Tumor
-0.3
CPT0092730003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0065930003
Tumor
-0.4
CPT0075170001
Normal
-0.4
CPT0069000003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0025920001
Normal
-0.4
CPT0088690003
Tumor
-0.4
CPT0024680001
Normal
-0.4
CPT0079000001
Normal
-0.4
CPT0078930003
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0012290003
Normal
-0.5
CPT0088500001
Normal
-0.5
CPT0088570001
Normal
-0.5
CPT0079300001
Normal
-0.5
CPT0089020003
Tumor
-0.5
CPT0078940001
Normal
-0.5
CPT0001230001
Normal
-0.5
CPT0012640003
Normal
-0.5
CPT0065870003
Tumor
-0.5
CPT0006730001
Normal
-0.5
CPT0088710001
Normal
-0.5
CPT0086830003
Normal
-0.5
CPT0088640003
Normal
-0.6
CPT0063640001
Normal
-0.6
CPT0009020003
Normal
-0.6
CPT0069010001
Normal
-0.8
CPT0001340003
Tumor
-0.8
CPT0078660003
Tumor
-1.0
CPT0079180003
Tumor
-1.1
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
