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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC24C is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
61.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
58.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
54.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
53.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
42.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
41.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
39.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
36.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
35.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
35.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
32.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
31.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
31.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
29.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
28.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
28.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
28.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
27.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
26.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
25.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
25.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
24.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
24.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
23.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
23.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
22.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
22.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
22.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
21.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
21.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
21.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
21.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
20.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
20.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
20.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
20.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
20.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
20.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
20.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
19.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
19.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
19.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
19.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
19.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
18.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
17.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
17.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
17.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
16.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
16.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
14.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
13.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
11.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
7.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC24C is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
82.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
54.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
53.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
51.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
51.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
50.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
50.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
50.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
50.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
49.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
48.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
48.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
47.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
46.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
46.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
45.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
45.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
45.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
45.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
44.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
44.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
44.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
44.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
44.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
44.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
43.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
43.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
43.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
43.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
43.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
43.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
42.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
42.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
42.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
42.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
42.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
42.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
41.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
41.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
41.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
41.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
41.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
41.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
40.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
40.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
40.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
40.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
40.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
40.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
39.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
39.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
39.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
39.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
39.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
39.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
39.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
39.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
39.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
39.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
39.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
39.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
39.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
38.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
38.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
38.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
38.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
38.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
38.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
38.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
38.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
38.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
38.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
38.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
38.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
38.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
37.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
37.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
37.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
37.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
37.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
37.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
37.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
37.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
37.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
37.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
37.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
37.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
37.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
37.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
37.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
37.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
36.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
36.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
36.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
36.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
36.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
36.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
36.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
36.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
36.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
36.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
36.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
36.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
36.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
36.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
36.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
36.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
36.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
35.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
35.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
35.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
35.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
35.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
35.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
35.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
35.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
35.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
34.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
34.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
34.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
34.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
34.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
34.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
34.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
34.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
34.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
34.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
34.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
34.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
34.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
34.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
34.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
34.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
34.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
34.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
33.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
33.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
33.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
33.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
33.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
33.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
33.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
33.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
33.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
33.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
33.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
33.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
33.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
33.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
33.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
33.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
33.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
33.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
33.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
33.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
33.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
32.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
32.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
32.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
32.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
32.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
32.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
32.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
32.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
32.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
32.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
32.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
32.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
32.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
32.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
32.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
32.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
32.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
31.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
31.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
31.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
31.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
31.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
31.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
31.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
31.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
31.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
31.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
31.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
31.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
31.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
31.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
31.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
31.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
30.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
30.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
30.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
30.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
30.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
30.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
30.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
30.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
30.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
30.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
30.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
30.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
30.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
30.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
30.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
30.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
30.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
30.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
30.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
30.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
30.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
29.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
29.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
29.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
29.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
29.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
29.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
29.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
29.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
29.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
29.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
29.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
29.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
29.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
29.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
29.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
29.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
29.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
29.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
28.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
28.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
28.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
28.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
28.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
28.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
28.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
28.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
28.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
28.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
28.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
28.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
28.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
28.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
28.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
28.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
28.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
28.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
28.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
28.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
27.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
27.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
27.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
27.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
27.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
27.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
27.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
27.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
27.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
27.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
27.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
27.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
27.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
27.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
27.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
27.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
27.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
27.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
26.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
26.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
26.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
26.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
26.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
26.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
26.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
26.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
26.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
26.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
26.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
26.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
26.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
26.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
26.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
26.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
26.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
26.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
26.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
26.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
26.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
26.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
26.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
26.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
26.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
26.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
26.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
26.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
25.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
25.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
25.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
25.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
25.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
25.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
25.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
25.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
25.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
25.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
25.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
25.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
25.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
25.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
25.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
25.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
25.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
25.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
25.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
25.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
25.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
25.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
24.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
24.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
24.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
24.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
24.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
24.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
24.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
24.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
24.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
24.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
24.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
24.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
24.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
24.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
24.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
23.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
23.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
23.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
23.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
23.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
23.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
23.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
23.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
23.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
23.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
23.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
23.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
22.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
22.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
22.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
22.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
22.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
22.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
22.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
22.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
22.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
22.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
22.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
22.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
22.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
22.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
22.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
22.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
21.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
21.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
21.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
21.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
21.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
21.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
21.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
21.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
21.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
21.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
21.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
21.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
20.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
20.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
20.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
20.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
20.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
20.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
20.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
20.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
20.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
20.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
20.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
20.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
20.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
20.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
20.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
20.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
19.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
19.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
19.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
19.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
19.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
19.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
19.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
19.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
19.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
19.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
18.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
18.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
18.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
18.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
18.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
18.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
18.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
18.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
18.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
18.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
18.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
18.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
18.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
18.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
17.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
17.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
17.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
17.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
17.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
17.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
16.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
16.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
15.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
15.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
15.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
15.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
14.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
14.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
14.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
14.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
14.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
13.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
13.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
13.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
12.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC24C is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
64.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
61.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
50.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
49.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
49.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
48.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
47.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
47.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
46.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
46.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
46.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
43.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
43.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
43.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
42.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
42.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
42.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
42.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
42.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
41.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
41.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
40.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
40.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
40.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
40.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
39.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
39.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
39.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
39.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
38.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
38.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
38.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
38.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
38.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
38.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
38.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
38.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
37.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
37.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
37.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
37.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
36.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
36.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
36.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
36.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
35.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
35.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
35.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
35.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
34.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
34.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
34.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
34.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
34.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
32.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
32.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
32.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
32.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
32.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
32.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
31.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
31.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
31.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
31.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
31.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
30.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
30.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
30.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
30.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
30.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
29.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
29.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
29.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
29.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
28.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
28.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
27.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
26.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
26.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
26.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
26.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
26.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
26.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
25.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
25.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
25.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
24.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
24.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
23.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
23.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
23.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
22.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
21.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
21.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
21.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
18.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC24C is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
113.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
91.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
79.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
77.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
74.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
73.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
70.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
70.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
70.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
63.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
62.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
62.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
62.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
60.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
59.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
58.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
57.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
55.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
54.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
54.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
53.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
53.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
52.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
52.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
50.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
49.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
49.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
49.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
49.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
49.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
48.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
48.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
47.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
46.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
46.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
46.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
46.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
46.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
45.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
45.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
44.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
44.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
44.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
44.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
44.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
44.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
44.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
43.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
43.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
43.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
43.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
42.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
42.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
42.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
42.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
41.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
41.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
41.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
41.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
41.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
40.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
40.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
40.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
40.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
40.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
40.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
40.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
40.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
40.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
39.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
39.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
39.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
39.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
39.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
39.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
39.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
38.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
38.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
38.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
37.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
37.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
37.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
37.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
37.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
36.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
36.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
36.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
36.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
36.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
36.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
35.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
35.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
35.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
35.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
35.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
35.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
35.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
34.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
34.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
34.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
34.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
34.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
34.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
33.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
33.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
33.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
33.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
33.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
33.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
33.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
33.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
33.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
33.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
32.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
32.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
32.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
32.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
32.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
32.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
31.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
31.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
31.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
31.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
31.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
31.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
31.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
31.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
31.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
31.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
31.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
31.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
31.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
31.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
30.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
30.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
30.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
30.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
30.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
30.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
30.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
30.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
30.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
29.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
29.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
29.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
29.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
29.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
29.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
28.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
28.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
28.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
28.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
28.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
28.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
28.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
28.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
28.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
27.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
27.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
27.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
27.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
27.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
27.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
27.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
27.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
26.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
26.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
26.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
26.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
26.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
26.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
26.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
26.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
26.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
25.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
25.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
25.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
25.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
25.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
25.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
25.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
25.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
25.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
24.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
24.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
24.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
24.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
24.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
24.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
24.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
24.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
24.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
23.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
23.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
23.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
23.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
23.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
23.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
23.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
23.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
23.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
22.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
22.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
22.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
22.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
22.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
22.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
22.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
21.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
21.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
21.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
21.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
21.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
21.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
20.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
20.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
20.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
20.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
20.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
20.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
20.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
20.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
20.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
19.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
19.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
19.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
19.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
19.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
19.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
18.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
18.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
18.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
18.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
17.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
17.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
17.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
17.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
16.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
16.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
16.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
16.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
16.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
15.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
15.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
14.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
14.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
14.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
14.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
13.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
12.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
12.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
12.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
12.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
11.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
11.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
10.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
0.5
CPT0001340003
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0076350001
Normal
0.3
CPT0012570003
Normal
0.3
CPT0012770003
Normal
0.3
CPT0092740003
Normal
0.3
CPT0001260009
Tumor
0.3
CPT0077140001
Normal
0.3
CPT0026420001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0066430001
Normal
0.3
CPT0079270003
Tumor
0.3
CPT0010170001
Normal
0.3
CPT0012280003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0006440003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0088780001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0001350001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0025110003
Tumor
0.2
CPT0000890001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0078840001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0012290003
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0086970003
Normal
0.2
CPT0010110003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0026410003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0088550004
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0081880003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0078990003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0069010001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0078510003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0086890003
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0014130001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0001550001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0084560003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0012550003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0069160003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0079180003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0075130003
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0065690003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0078660003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0019990003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0088760003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0069000003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0092730003
Tumor
-0.4
CPT0000640003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
