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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FAM89B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
165.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
52.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
52.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
46.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
45.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
44.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
41.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
37.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
34.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
33.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
30.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
29.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
27.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
26.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
26.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
26.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
26.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
25.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
25.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
25.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
23.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
22.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
22.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
22.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
22.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
21.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
21.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
21.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
20.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
20.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
20.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
19.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
18.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
18.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
17.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
17.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
16.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
16.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
15.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
15.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
14.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
12.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
12.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
9.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
8.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
8.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
6.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FAM89B is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
98.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
94.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
83.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
81.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
79.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
77.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
73.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
73.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
72.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
71.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
66.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
66.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
65.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
65.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
65.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
63.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
63.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
61.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
61.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
61.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
60.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
60.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
60.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
60.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
59.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
58.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
56.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
55.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
55.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
55.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
55.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
55.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
55.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
55.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
55.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
55.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
54.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
53.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
53.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
53.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
53.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
53.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
53.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
52.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
52.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
52.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
52.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
52.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
51.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
51.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
51.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
51.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
51.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
51.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
51.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
51.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
50.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
50.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
50.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
50.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
50.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
50.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
50.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
49.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
49.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
49.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
49.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
49.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
49.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
49.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
49.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
49.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
48.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
48.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
48.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
48.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
48.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
48.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
48.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
48.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
48.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
48.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
47.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
47.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
47.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
47.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
47.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
47.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
47.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
47.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
47.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
47.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
47.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
46.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
46.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
46.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
45.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
45.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
45.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
45.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
45.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
45.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
45.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
45.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
45.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
45.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
45.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
45.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
45.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
44.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
44.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
44.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
44.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
44.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
44.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
44.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
44.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
44.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
44.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
44.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
44.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
43.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
43.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
43.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
43.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
43.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
43.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
43.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
43.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
43.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
42.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
42.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
42.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
42.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
42.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
42.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
41.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
41.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
41.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
41.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
41.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
41.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
41.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
41.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
41.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
41.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
41.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
41.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
41.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
41.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
40.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
40.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
40.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
40.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
40.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
40.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
40.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
40.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
40.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
40.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
40.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
40.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
40.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
40.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
40.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
40.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
39.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
39.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
39.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
39.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
39.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
39.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
39.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
39.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
39.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
39.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
39.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
39.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
38.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
38.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
38.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
38.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
38.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
38.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
38.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
38.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
38.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
38.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
38.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
38.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
38.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
38.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
38.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
38.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
38.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
38.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
38.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
38.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
37.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
37.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
37.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
37.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
37.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
37.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
37.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
37.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
37.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
37.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
37.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
37.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
37.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
37.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
37.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
37.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
36.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
36.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
36.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
36.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
36.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
36.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
36.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
36.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
36.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
36.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
36.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
36.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
35.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
35.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
35.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
35.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
35.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
35.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
35.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
35.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
35.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
35.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
35.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
35.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
35.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
35.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
35.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
35.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
35.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
35.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
35.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
35.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
35.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
35.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
35.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
34.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
34.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
34.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
34.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
34.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
34.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
34.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
34.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
34.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
34.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
34.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
34.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
34.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
34.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
34.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
33.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
33.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
33.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
33.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
33.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
33.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
33.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
33.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
33.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
33.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
33.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
33.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
33.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
33.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
33.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
32.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
32.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
32.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
32.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
32.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
32.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
32.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
32.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
32.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
32.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
32.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
32.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
32.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
32.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
32.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
32.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
32.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
32.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
32.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
32.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
32.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
32.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
32.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
32.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
32.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
31.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
31.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
31.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
31.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
31.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
31.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
31.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
31.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
31.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
31.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
31.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
31.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
31.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
31.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
31.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
30.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
30.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
30.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
30.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
30.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
30.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
30.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
30.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
30.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
30.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
30.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
30.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
30.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
30.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
30.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
30.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
30.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
30.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
30.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
29.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
29.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
29.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
29.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
29.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
29.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
29.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
29.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
29.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
29.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
29.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
29.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
29.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
28.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
28.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
28.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
28.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
28.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
28.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
28.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
28.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
28.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
28.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
28.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
28.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
28.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
28.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
28.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
28.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
28.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
28.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
28.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
28.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
28.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
28.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
28.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
28.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
28.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
27.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
27.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
27.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
27.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
27.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
27.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
27.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
27.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
27.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
27.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
27.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
27.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
27.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
27.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
27.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
27.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
26.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
26.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
26.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
26.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
26.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
26.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
26.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
26.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
26.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
26.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
26.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
26.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
26.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
26.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
26.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
26.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
26.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
26.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
25.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
25.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
25.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
25.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
25.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
25.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
25.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
25.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
25.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
25.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
25.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
25.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
25.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
25.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
25.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
24.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
24.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
24.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
24.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
24.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
24.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
24.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
24.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
23.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
23.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
23.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
23.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
23.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
23.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
23.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
23.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
23.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
23.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
23.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
22.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
22.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
22.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
22.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
22.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
22.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
22.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
22.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
22.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
22.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
22.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
21.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
21.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
21.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
21.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
21.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
20.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
20.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
20.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
20.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
19.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
19.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
19.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
19.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
18.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
18.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
18.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
18.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
17.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
17.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
17.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
16.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
15.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
15.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
14.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
14.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
13.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
13.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
13.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
12.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
10.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FAM89B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
74.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
73.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
73.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
62.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
59.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
59.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
57.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
57.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
55.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
55.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
51.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
50.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
49.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
49.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
49.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
49.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
48.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
47.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
47.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
47.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
47.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
46.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
46.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
45.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
44.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
44.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
43.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
43.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
43.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
42.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
42.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
42.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
42.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
41.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
41.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
41.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
40.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
40.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
40.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
40.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
40.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
39.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
39.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
38.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
38.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
37.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
37.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
36.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
36.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
36.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
36.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
36.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
36.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
36.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
35.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
35.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
35.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
35.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
34.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
34.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
34.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
33.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
33.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
33.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
33.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
33.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
33.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
32.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
32.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
32.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
32.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
31.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
31.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
31.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
30.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
30.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
29.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
29.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
28.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
28.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
25.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
25.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
24.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
23.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
23.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
22.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
21.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
20.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
20.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
17.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
12.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
11.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FAM89B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
138.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
116.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
107.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
106.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
102.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
101.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
99.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
99.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
96.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
93.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
89.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
87.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
84.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
83.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
82.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
80.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
79.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
79.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
78.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
77.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
76.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
74.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
74.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
74.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
72.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
72.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
70.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
70.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
70.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
70.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
69.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
69.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
69.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
68.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
68.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
68.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
66.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
66.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
62.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
62.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
61.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
60.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
60.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
58.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
58.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
58.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
57.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
57.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
57.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
57.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
57.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
57.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
56.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
55.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
55.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
55.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
55.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
54.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
54.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
54.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
54.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
53.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
53.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
53.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
53.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
52.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
52.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
52.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
52.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
51.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
51.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
51.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
50.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
50.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
49.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
49.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
49.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
48.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
48.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
48.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
48.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
48.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
48.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
47.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
47.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
47.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
46.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
46.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
46.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
46.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
46.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
45.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
44.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
44.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
44.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
44.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
44.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
44.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
44.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
43.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
43.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
43.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
43.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
43.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
43.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
42.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
42.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
42.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
42.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
42.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
42.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
42.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
42.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
42.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
41.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
41.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
41.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
41.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
41.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
41.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
41.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
41.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
40.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
40.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
40.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
39.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
39.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
39.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
39.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
39.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
38.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
38.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
38.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
38.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
38.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
38.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
38.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
38.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
38.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
37.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
37.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
37.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
37.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
37.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
37.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
37.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
36.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
36.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
36.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
36.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
36.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
36.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
35.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
35.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
35.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
35.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
35.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
34.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
34.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
34.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
34.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
34.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
34.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
33.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
33.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
33.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
33.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
33.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
33.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
32.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
32.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
32.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
32.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
32.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
32.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
32.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
31.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
31.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
31.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
31.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
31.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
31.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
31.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
30.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
30.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
30.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
30.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
30.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
29.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
29.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
29.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
29.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
29.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
29.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
29.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
28.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
28.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
28.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
27.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
27.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
27.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
27.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
27.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
27.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
26.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
26.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
26.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
26.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
26.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
25.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
25.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
25.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
25.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
25.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
24.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
24.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
24.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
24.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
24.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
23.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
23.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
23.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
23.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
23.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
22.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
22.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
22.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
22.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
22.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
21.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
21.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
20.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
20.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
20.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
20.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
20.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
19.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
19.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
19.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
19.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
19.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
18.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
17.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
17.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
17.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
16.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
16.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
16.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
16.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
16.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
15.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
15.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
15.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
14.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
14.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
14.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
13.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
12.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
12.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
12.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
11.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
10.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
7.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0089460004
Tumor
1.5
CPT0065870003
Tumor
1.4
CPT0088630003
Tumor
1.3
CPT0084560003
Tumor
1.1
CPT0071150004
Tumor
1.1
CPT0077490003
Tumor
1.1
CPT0025110003
Tumor
1.0
CPT0085670003
Tumor
1.0
CPT0014370004
Tumor
0.9
CPT0026410003
Tumor
0.9
CPT0000780007
Tumor
0.8
CPT0010160003
Tumor
0.8
CPT0079480003
Tumor
0.8
CPT0009000003
Tumor
0.8
CPT0006440003
Tumor
0.8
CPT0021240003
Tumor
0.7
CPT0086870003
Tumor
0.7
CPT0011240003
Tumor
0.7
CPT0075720003
Tumor
0.7
CPT0077310003
Tumor
0.7
CPT0066480003
Tumor
0.7
CPT0075560003
Tumor
0.7
CPT0012080003
Tumor
0.7
CPT0001540009
Tumor
0.6
CPT0025350003
Tumor
0.6
CPT0000870016
Tumor
0.6
CPT0019130003
Tumor
0.6
CPT0086030003
Tumor
0.6
CPT0012370003
Tumor
0.6
CPT0065930003
Tumor
0.6
CPT0078990003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0077110003
Tumor
0.6
CPT0006630003
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0078800003
Tumor
0.6
CPT0086950003
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0088760003
Tumor
0.5
CPT0025230003
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0015910003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0081990003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0088900003
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0079270003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0017850003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0007860003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0065430003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0012550003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0025050003
Tumor
0.2
CPT0012670003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0001550001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0079180003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0024680001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0020130001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0012280003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0086890003
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0001500009
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0017450001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0092730003
Tumor
-0.3
CPT0078940001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0001220008
Tumor
-0.3
CPT0020120003
Tumor
-0.3
CPT0089480003
Normal
-0.3
CPT0078670001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0026420001
Normal
-0.4
CPT0001190001
Normal
-0.4
CPT0065820001
Normal
-0.4
CPT0088480003
Tumor
-0.4
CPT0006730001
Normal
-0.4
CPT0010170001
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0077500001
Normal
-0.4
CPT0076350001
Normal
-0.4
CPT0001340003
Tumor
-0.4
CPT0063330001
Normal
-0.4
CPT0000890001
Normal
-0.4
CPT0088710001
Normal
-0.4
CPT0066430001
Normal
-0.5
CPT0018250001
Normal
-0.5
CPT0086370003
Normal
-0.5
CPT0092800003
Normal
-0.5
CPT0012290003
Normal
-0.5
CPT0066470004
Tumor
-0.5
CPT0078660003
Tumor
-0.5
CPT0000790001
Normal
-0.5
CPT0063640001
Normal
-0.5
CPT0009060003
Tumor
-0.5
CPT0079000001
Normal
-0.5
CPT0012570003
Normal
-0.6
CPT0014350001
Normal
-0.6
CPT0019990003
Tumor
-0.6
CPT0012180003
Tumor
-0.6
CPT0023710001
Normal
-0.6
CPT0088780001
Normal
-0.6
CPT0081880003
Tumor
-0.6
CPT0078510003
Tumor
-0.6
CPT0082010001
Normal
-0.6
CPT0013790003
Normal
-0.7
CPT0012090003
Normal
-0.8
CPT0014160003
Tumor
-0.8
CPT0014130001
Normal
-0.8
CPT0078840001
Normal
-0.8
CPT0069010001
Normal
-0.9
CPT0012770003
Normal
-0.9
CPT0069000003
Tumor
-1.0
CPT0092310003
Normal
-1.0
CPT0088970003
Tumor
-1.1
CPT0069160003
Tumor
-1.1
CPT0025060001
Normal
-1.1
CPT0025610001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0081600003
Tumor
N/A
CPT0006900003
Tumor
N/A
CPT0081620001
Normal
N/A
CPT0010120001
Normal
N/A
CPT0025580004
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
