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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCIM is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
249.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
233.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
224.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
196.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
175.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
156.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
124.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
99.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
93.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
78.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
78.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
71.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
71.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
69.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
57.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
56.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
53.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
52.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
52.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
49.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
48.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
47.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
46.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
46.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
44.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
43.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
38.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
38.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
36.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
36.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
35.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
30.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
30.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
29.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
27.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
27.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
24.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
19.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
19.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
18.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
18.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
17.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
16.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
16.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
15.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
13.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
10.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
10.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
5.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
4.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
2.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCIM is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
435.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
282.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
269.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
247.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
220.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
211.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
203.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
197.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
188.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
187.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
178.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
173.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
167.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
161.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
154.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
130.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
128.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
124.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
122.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
119.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
119.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
119.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
117.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
116.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
110.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
108.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
107.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
103.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
102.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
99.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
95.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
95.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
94.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
93.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
93.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
89.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
86.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
86.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
81.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
81.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
80.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
80.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
79.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
78.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
78.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
77.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
74.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
74.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
72.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
69.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
67.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
66.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
65.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
65.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
65.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
63.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
62.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
61.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
60.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
58.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
57.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
57.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
57.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
57.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
57.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
56.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
56.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
56.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
56.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
56.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
55.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
55.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
54.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
54.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
54.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
53.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
53.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
52.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
51.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
51.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
50.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
50.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
49.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
49.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
48.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
48.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
48.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
48.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
48.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
48.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
47.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
47.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
47.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
47.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
46.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
46.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
46.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
46.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
45.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
45.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
44.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
44.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
44.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
44.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
44.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
44.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
43.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
42.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
42.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
42.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
42.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
41.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
40.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
40.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
40.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
40.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
39.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
39.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
39.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
39.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
39.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
39.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
39.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
38.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
38.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
38.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
38.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
38.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
38.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
37.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
37.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
37.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
37.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
37.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
37.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
37.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
37.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
37.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
37.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
37.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
36.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
36.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
36.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
36.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
36.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
35.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
35.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
35.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
35.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
35.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
35.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
35.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
35.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
34.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
34.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
34.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
34.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
34.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
34.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
34.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
33.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
33.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
33.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
33.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
33.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
33.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
32.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
32.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
32.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
32.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
32.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
32.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
32.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
32.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
32.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
31.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
31.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
31.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
31.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
31.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
31.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
30.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
30.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
29.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
29.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
29.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
29.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
29.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
29.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
29.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
29.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
28.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
28.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
28.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
27.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
27.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
27.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
27.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
27.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
27.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
26.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
26.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
26.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
26.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
26.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
26.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
26.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
26.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
26.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
26.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
26.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
25.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
25.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
25.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
25.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
25.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
25.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
25.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
25.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
25.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
24.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
24.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
24.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
24.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
24.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
24.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
24.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
23.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
23.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
23.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
23.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
22.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
22.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
22.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
22.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
22.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
22.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
22.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
22.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
22.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
22.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
22.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
22.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
22.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
21.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
21.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
21.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
21.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
21.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
21.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
21.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
21.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
21.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
20.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
20.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
20.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
20.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
20.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
20.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
20.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
20.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
20.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
20.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
20.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
19.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
19.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
19.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
19.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
18.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
18.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
18.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
18.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
18.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
18.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
18.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
17.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
17.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
17.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
17.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
17.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
17.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
17.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
17.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
16.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
16.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
16.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
16.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
16.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
16.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
16.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
15.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
15.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
15.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
15.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
15.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
15.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
15.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
14.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
14.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
14.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
14.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
14.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
14.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
14.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
14.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
14.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
13.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
13.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
13.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
13.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
13.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
13.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
13.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
13.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
12.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
12.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
12.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
12.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
12.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
12.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
12.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
12.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
12.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
11.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
10.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
10.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
10.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
10.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
10.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
10.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
10.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
9.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
9.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
9.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
9.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
9.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
9.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
9.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
9.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
8.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
8.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
8.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
8.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
8.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
8.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
7.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
7.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
7.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
7.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
7.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
7.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
7.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
7.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
7.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
7.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
6.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
6.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
6.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
6.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
5.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
5.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
5.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
5.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
5.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
5.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
5.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
5.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
4.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
4.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
4.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
4.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
4.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
3.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
3.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
3.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
2.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
2.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
2.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
2.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
1.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
1.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCIM is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
374.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
149.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
125.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
98.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
98.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
88.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
77.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
76.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
70.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
65.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
62.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
60.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
57.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
53.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
49.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
49.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
49.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
47.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
47.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
46.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
46.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
45.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
44.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
43.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
41.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
40.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
40.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
38.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
37.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
37.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
37.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
36.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
35.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
33.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
32.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
32.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
32.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
32.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
30.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
26.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
26.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
26.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
25.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
25.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
24.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
24.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
23.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
23.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
22.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
22.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
20.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
20.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
19.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
18.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
17.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
13.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
12.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
11.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
10.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
10.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
9.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
9.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
8.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
8.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
8.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
8.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
8.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
7.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
7.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
5.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
4.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
4.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
4.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
4.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
3.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
3.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
3.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
2.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
2.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
1.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
1.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCIM is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
793.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
744.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
569.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
452.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
364.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
351.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
348.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
339.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
282.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
260.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
241.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
217.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
206.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
198.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
187.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
164.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
160.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
156.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
145.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
129.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
114.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
113.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
108.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
103.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
102.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
101.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
97.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
93.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
93.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
87.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
75.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
66.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
64.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
64.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
63.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
60.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
58.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
58.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
56.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
55.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
53.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
53.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
53.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
50.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
49.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
47.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
44.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
44.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
44.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
42.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
40.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
39.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
38.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
35.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
33.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
33.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
31.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
31.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
30.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
29.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
29.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
28.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
27.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
27.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
27.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
26.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
26.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
26.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
25.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
24.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
24.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
22.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
22.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
22.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
21.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
21.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
20.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
20.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
19.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
19.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
19.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
19.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
19.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
19.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
19.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
18.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
18.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
18.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
17.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
17.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
17.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
17.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
17.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
17.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
16.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
16.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
15.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
14.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
13.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
13.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
13.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
13.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
12.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
11.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
11.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
10.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
10.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
10.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
10.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
9.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
9.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
9.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
9.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
8.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
8.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
8.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
8.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
7.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
7.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
7.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
7.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
7.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
6.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
6.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
6.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
6.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
6.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
6.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
6.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
6.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
5.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
5.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
5.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
5.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
5.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
5.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
5.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
4.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
4.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
4.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
4.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
4.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
4.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
4.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
4.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
4.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
3.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
3.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
3.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
3.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
3.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
3.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
3.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
3.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
3.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
3.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
3.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
3.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
3.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
3.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
3.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
3.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
3.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
3.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
2.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
2.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
2.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
2.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
2.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
2.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
2.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
2.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
2.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
2.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
2.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
2.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
2.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
2.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
2.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
2.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
2.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
2.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
2.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
1.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
1.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
1.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
1.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
1.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
1.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
1.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
1.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
1.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
1.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
1.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
1.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
1.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
1.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
1.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
1.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
1.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
1.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
1.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
1.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
1.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
0.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
0.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
0.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
0.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0077310003
Tumor
1.7
CPT0078830003
Tumor
1.1
CPT0063330001
Normal
0.9
CPT0078930003
Tumor
0.8
CPT0087040003
Tumor
0.7
CPT0063320003
Tumor
0.6
CPT0075170001
Normal
0.6
CPT0086890003
Normal
0.6
CPT0082010001
Normal
0.6
CPT0092740003
Normal
0.6
CPT0078840001
Normal
0.5
CPT0001190001
Normal
0.5
CPT0024680001
Normal
0.5
CPT0092310003
Normal
0.5
CPT0088640003
Normal
0.4
CPT0012570003
Normal
0.4
CPT0007870001
Normal
0.4
CPT0089460004
Tumor
0.4
CPT0025920001
Normal
0.4
CPT0078670001
Normal
0.4
CPT0069190001
Normal
0.4
CPT0001230001
Normal
0.4
CPT0075560003
Tumor
0.3
CPT0014130001
Normal
0.3
CPT0012770003
Normal
0.3
CPT0075570001
Normal
0.3
CPT0023690003
Tumor
0.3
CPT0006730001
Normal
0.3
CPT0020130001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0077140001
Normal
0.2
CPT0012370003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0011240003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0077490003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0001350001
Normal
-0.1
CPT0079180003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0020120003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0078660003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0001220008
Tumor
-0.3
CPT0089480003
Normal
-0.3
CPT0069160003
Tumor
-0.4
CPT0012550003
Tumor
-0.4
CPT0081990003
Tumor
-0.4
CPT0071150004
Tumor
-0.5
CPT0076330003
Tumor
-0.6
CPT0079410003
Tumor
-0.6
CPT0086870003
Tumor
-0.7
CPT0025880003
Tumor
-0.7
CPT0001260009
Tumor
-0.8
CPT0088630003
Tumor
-0.8
CPT0000640003
Tumor
-0.8
CPT0075130003
Tumor
-0.9
CPT0077110003
Tumor
-1.1
CPT0024670003
Tumor
-1.1
CPT0023350003
Tumor
-1.2
CPT0001180009
Tumor
-1.2
CPT0023360001
Normal
-1.3
CPT0087050003
Normal
-1.5
CPT0001340003
Tumor
-1.5
CPT0025050003
Tumor
-1.6
CPT0077320001
Normal
-1.6
CPT0079430001
Normal
-2.3
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0078800003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0021240003
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0088550004
Tumor
N/A
CPT0025230003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0001510001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0012290003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
