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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
69.6
nTPM
HPA Brain:
129.1
nTPM
GTEx:
69.6
nTPM
FANTOM5:
280.9
Scaled Tags Per Million
Pig:
18.6
nTPM
Mouse:
4.4
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
129.1
Sample id
Sample description
nTPM
Amygdala nTPM: 114.2
1987
Female, age 91, left hemisphere
133.3
2517
Female, age 94, left hemisphere
125.5
2814
Male, age 76, right hemisphere
117.2
2514
Male, age 75, right hemisphere
101.1
2695
Female, age 67, right hemisphere
93.8
Basal amygdala nTPM: 114.0
2243
Female, age 91, right hemisphere
138.5
2609
Male, age 75, right hemisphere
124.2
2685
Female, age 94, left hemisphere
122.6
2110
Male, age 80, left hemisphere
116.9
1955
Male, age 76, both hemispheres
106.0
2827
Female, age 67, right hemisphere
75.7
Central amygdala nTPM: 129.1
2239
Male, age 80, left hemisphere
136.3
2826
Female, age 94, left hemisphere
135.7
2515
Male, age 75, right hemisphere
130.7
2701
Female, age 91, right hemisphere
125.5
1905
Male, age 76, both hemispheres
117.3
Corticomedial amygdala nTPM: 112.3
2242
Female, age 91, right hemisphere
133.9
2829
Male, age 80, left hemisphere
124.4
2535
Female, age 67, right hemisphere
112.8
2429
Female, age 94, left hemisphere
104.6
2428
Male, age 75, right hemisphere
101.5
2240
Male, age 76, both hemispheres
96.7
Lateral amygdala nTPM: 109.4
2534
Female, age 94, left hemisphere
150.6
2255
Female, age 91, right hemisphere
117.1
2256
Male, age 80, left hemisphere
116.4
1883
Male, age 76, both hemispheres
115.2
2516
Male, age 75, right hemisphere
97.9
2830
Female, age 67, right hemisphere
59.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
69.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 69.6
Samples: 152
Max nTPM: 133.5
Min nTPM: 14.9
Std nTPM: 21.5
Median nTPM: 67.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
133.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
132.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
130.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
124.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
120.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
120.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
111.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
109.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
108.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
106.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
105.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
105.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
104.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
100.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
96.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
96.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
95.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
95.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
94.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
94.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
93.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
93.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
91.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
90.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
89.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
89.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
88.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
88.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
88.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
86.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
85.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
85.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
84.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
83.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
83.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
83.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
83.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
82.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
81.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
81.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
80.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
80.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
79.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
79.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
78.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
78.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
77.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
77.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
77.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
76.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
76.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
76.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
75.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
74.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
74.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
74.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
73.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
73.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
73.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
73.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
72.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
72.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
72.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
72.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
72.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
71.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
71.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
70.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
69.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
69.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
69.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
68.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
68.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
68.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
68.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
67.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
67.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
66.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
66.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
65.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
65.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
65.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
64.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
63.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
62.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
61.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
61.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
61.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
61.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
61.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
61.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
61.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
60.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
60.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
60.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
59.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
59.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
58.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
58.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
58.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
58.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
57.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
56.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
56.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
56.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
56.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
56.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
55.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
55.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
55.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
55.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
55.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
55.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
54.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
54.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
53.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
52.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
52.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
51.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
51.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
50.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
49.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
49.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
49.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
49.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
48.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
48.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
48.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
47.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
47.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
47.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
47.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
47.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
47.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
46.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
46.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
46.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
44.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
44.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
44.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
44.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
44.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
44.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
42.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
42.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
41.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
40.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
39.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
39.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
31.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
29.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
14.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
4.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 4.4
Samples: 4
Max nTPM: 5.9
Min nTPM: 2.5
Sample A
Male
5.7
Sample B
Male
5.9
Sample C
Female
2.5
Sample D
Female
3.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.