HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:10.1 nTPM
HPA Brain:24.6 nTPM
GTEx:10.1 nTPM
FANTOM5:17.7 Scaled Tags Per Million
Pig:17.1 nTPM
Mouse:7.0 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054744
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 24.6
Sample id Sample description nTPM
Hippocampus
nTPM: 16.6
1911 Female, age 85, right hemisphere 20.8
2621 Female, age 67, right hemisphere 18.0
1898 Male, age 80, left hemisphere 15.8
2529 Female, age 94, left hemisphere 15.7
2148 Female, age 91, left hemisphere 14.6
1855 Male, age 76, left hemisphere 14.4
Dentate gyrus
nTPM: 18.5
2530 Female, age 94, left hemisphere 30.5
2010 Male, age 76, both hemispheres 18.9
2528 Male, age 74, both hemispheres 18.2
2246 Female, age 85, both hemispheres 16.7
2531 Female, age 67, both hemispheres 16.1
1927 Female, age 91, both hemispheres 10.9
Entorhinal gyrus
nTPM: 19.9
2117 Female, age 91, right hemisphere 30.8
2764 Male, age 80, right hemisphere 24.9
1938 Female, age 85, left hemisphere 16.9
2613 Female, age 94, left hemisphere 15.7
2686 Male, age 75, right hemisphere 15.7
1787 Male, age 76, left hemisphere 15.3
Hippocampus, CA1
nTPM: 13.9
1873 Female, age 85, both hemispheres 16.7
2082 Female, age 91, right hemisphere 15.5
2527 Male, age 74, both hemispheres 14.8
2749 Male, age 80, left hemisphere 12.6
2045 Male, age 76, both hemispheres 9.9
Hippocampus, CA2
nTPM: 17.9
1963 Male, age 80, left hemisphere 22.5
2249 Male, age 74, both hemispheres 21.7
1940 Female, age 85, left hemisphere 19.6
2437 Female, age 94, left hemisphere 17.0
2113 Female, age 91, right hemisphere 15.5
1892 Male, age 76, both hemispheres 11.4
Hippocampus, CA3
nTPM: 14.5
1891 Female, age 85, both hemispheres 24.3
2436 Male, age 74, both hemispheres 18.4
1867 Male, age 76, both hemispheres 16.3
2137 Male, age 80, left hemisphere 10.8
2861 Female, age 67, both hemispheres 8.8
2620 Female, age 94, left hemisphere 8.3
Parahippocampal cortex
nTPM: 18.0
2532 Female, age 72, left hemisphere 26.1
1990 Female, age 91, right hemisphere 21.1
1933 Female, age 85, both hemispheres 19.5
2692 Male, age 74, both hemispheres 19.1
2693 Female, age 94, both hemispheres 18.5
2018 Male, age 76, both hemispheres 18.4
1850 Male, age 80, both hemispheres 17.7
2245 Female, age 91, both hemispheres 16.7
2250 Female, age 67, right hemisphere 11.4
2622 Female, age 67, right hemisphere 11.3
Perirhinal gyrus
nTPM: 13.7
2521 Female, age 94, right hemisphere 16.2
2848 Male, age 76, right hemisphere 15.1
1841 Female, age 85, right hemisphere 13.1
1794 Male, age 80, right hemisphere 12.2
1847 Female, age 91, left hemisphere 11.9
Subiculum
nTPM: 24.6
2042 Male, age 76, both hemispheres 36.9
1901 Male, age 80, both hemispheres 29.0
1977 Female, age 85, both hemispheres 27.2
2619 Male, age 74, both hemispheres 18.8
2438 Female, age 94, left hemisphere 18.7
2729 Female, age 91, right hemisphere 16.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.1
Samples: 197

Max nTPM: 33.7
Min nTPM: 1.8
Std nTPM: 6.1
Median nTPM: 8.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 33.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 28.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 26.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 25.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 25.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 25.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 24.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 24.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 23.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 22.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 22.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 17.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.7
FF:10153-102I9 76 years, female 21.0
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 17.1
Pig sample Sample description nTPM
Subiculum
nTPM: 12.0
Samples: 4

Max nTPM: 13.6
Min nTPM: 10.1
Sample A Female 10.1
Sample B Female 13.6
Sample C Male 11.2
Sample D Male 13.0
Dorsal hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 21.6
Min nTPM: 11.3
Sample A Female 20.9
Sample B Female 14.7
Sample C Male 21.6
Sample D Male 11.3
Entorhinal cortex
nTPM: 13.5
Samples: 4

Max nTPM: 15.6
Min nTPM: 11.4
Sample A Female 12.7
Sample B Female 14.3
Sample C Male 11.4
Sample D Male 15.6
Ventral hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 17.4
Min nTPM: 12.3
Sample A Female 12.9
Sample B Female 12.9
Sample C Male 12.3
Sample D Male 17.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 7.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.0
Samples: 4

Max nTPM: 5.6
Min nTPM: 3.0
Sample A Male 5.6
Sample B Male 3.8
Sample C Female 3.7
Sample D Female 3.0
Hippocampal formation
nTPM: 7.1
Samples: 4

Max nTPM: 10.2
Min nTPM: 4.4
Sample A Male 4.4
Sample B Male 6.7
Sample C Female 10.2
Sample D Female 6.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69782007 Antisense, RP_050505_02_B02, Mouse strain C57BL/6J (56 days, male) 0.4

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