COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
RNA expressioni
Consensus:6.4 nTPM
HPA:3.9 nTPM
GTEx:6.4 nTPM
FANTOM5:13.5 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION
Neuroendocrine cellsTuft cellsColonocytesGoblet cellsT-cellsNK-cellsEnteric transient amplifying cellsEnteric stem cells0246810nCPM

COLON - Antibody stainingi
Antibody HPA057790
Endothelial cells Not detected
Glandular cells Not detected
Peripheral nerve/ganglion Not detected



COLON - HPA RNA-seqi
Average nTPMi 3.9
overview
Male, age 54
Colon sample 67
nTPM: 4.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 4.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 3.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 3.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 3.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 3.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 3.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 3.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 3.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 5.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 5.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 6.4
GTEx sample id Sample description nTPM
4.86.17.81.211.802468101214
Colon - Sigmoid
Average nTPM: 6.4
Samples: 419

Max nTPM: 15.5
Min nTPM: 1.2
Std nTPM: 2.2
Median nTPM: 6.1
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 15.5
GTEX-1BAJH-2726-SM-7IGNJ 70-79 years, male 13.8
GTEX-1NV8Z-2526-SM-F648C 60-69 years, male 11.8
GTEX-11O72-2526-SM-GJ3PW 40-49 years, male 11.7
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 11.7
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 11.7
GTEX-1NV5F-2426-SM-GPIAM 60-69 years, female 11.6
GTEX-15F5U-1426-SM-7KUN2 40-49 years, male 11.5
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 11.4
GTEX-1IDJH-2826-SM-CJI49 70-79 years, male 11.4
GTEX-14DAQ-2926-SM-664MV 60-69 years, female 11.3
Show allShow less
4.25.57.20.811.5024681012141618
Colon - Transverse
Average nTPM: 5.9
Samples: 479

Max nTPM: 18.8
Min nTPM: 0.8
Std nTPM: 2.5
Median nTPM: 5.5
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 18.8
GTEX-1E2YA-2626-SM-7MGWW 50-59 years, male 17.6
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 17.0
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 16.4
GTEX-16MT8-2726-SM-7IGLJ 60-69 years, female 15.0
GTEX-1POEN-2026-SM-E6CRL 30-39 years, female 14.5
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 14.0
GTEX-OHPL-1426-SM-G9ER7 60-69 years, female 13.1
GTEX-16Z82-2226-SM-6LPJ7 60-69 years, male 12.9
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 12.5
GTEX-1QCLZ-1926-SM-E6CR3 60-69 years, female 12.5
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 13.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 13.5
FF:10014-101C5 62,83,84 years, mixed 13.5

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