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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPRN is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
140.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
117.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
76.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
72.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
70.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
64.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
64.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
63.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
62.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
61.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
58.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
46.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
44.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
42.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
41.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
41.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
39.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
39.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
38.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
37.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
36.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
36.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
36.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
35.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
35.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
34.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
34.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
33.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
32.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
32.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
32.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
32.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
31.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
31.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
29.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
29.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
29.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
29.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
29.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
28.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
28.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
28.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
26.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
26.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
26.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
25.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
25.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
25.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
25.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
25.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
25.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
24.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
23.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
23.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
23.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
23.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
22.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
22.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
22.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
22.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
22.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
22.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
22.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
21.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
21.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
21.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
21.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
21.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
21.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
21.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
20.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
20.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
19.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
19.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
19.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
19.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
19.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
18.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
18.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
18.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
18.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
18.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
17.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
17.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
17.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
17.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
17.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
17.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
17.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
17.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
17.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
16.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
16.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
16.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
16.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
16.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
16.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
16.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
16.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
16.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
15.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
15.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
15.6
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
15.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
15.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
15.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
15.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
15.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
15.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
15.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
15.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
14.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
14.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
14.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
14.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
14.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
14.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
14.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
14.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
14.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
14.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
14.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
14.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
14.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
14.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
13.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
13.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
13.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
13.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
13.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
13.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
13.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
13.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
13.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
13.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
13.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
13.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
13.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
13.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
13.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
13.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
13.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
12.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
12.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
12.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
12.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
12.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
12.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
12.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
12.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
12.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
12.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
12.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
12.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
12.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
12.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
12.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
12.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
12.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
12.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
11.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
11.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
11.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
11.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
11.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
11.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
11.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
11.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
11.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
11.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
11.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
11.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
11.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
11.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
11.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
11.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
11.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
11.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
11.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
10.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
10.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
10.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
10.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
10.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
10.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
10.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
10.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
10.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
10.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
10.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
10.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
10.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
10.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
10.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
10.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
10.2
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
10.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
10.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
10.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
9.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
9.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
9.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
9.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
9.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
9.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
9.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
9.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
9.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
9.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
9.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
9.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
9.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
9.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
9.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
9.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
8.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
8.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
8.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
8.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
8.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
8.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
8.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
8.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
8.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
7.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
7.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
7.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
7.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
7.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
7.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
7.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
7.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
7.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
7.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
7.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
7.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
7.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
7.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
7.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
7.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
7.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
7.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
7.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
6.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
6.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
6.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
6.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
6.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
6.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
6.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
6.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
6.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
6.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
6.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
6.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
6.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
6.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
6.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.9
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
5.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
5.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
5.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
5.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
5.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
5.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
5.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
5.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
5.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
5.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
5.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
5.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
5.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
5.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
5.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
4.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
4.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
4.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
4.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
4.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
4.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
4.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
4.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
3.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
3.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
3.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
3.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
3.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
3.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
3.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
3.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
2.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
2.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
2.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPRN is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.2
Number of samples
231
Samples
Sample
Description
TPM
DO45303
0 years, female, NA, stage:3, alive, 990 days
101.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
37.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
36.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
32.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
32.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
31.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
29.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
28.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
26.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
24.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
23.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
23.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
22.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
21.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
20.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
20.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
20.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
19.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
19.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
19.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
18.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
18.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
18.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
18.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
18.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
17.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
17.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
17.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
16.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
16.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
16.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
16.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
16.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
16.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
16.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
16.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
15.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
15.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
15.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
15.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
14.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
14.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
13.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
13.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
13.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
12.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
12.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
12.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
12.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
12.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
11.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
11.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
11.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
11.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
11.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
11.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
11.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
11.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
10.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
10.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
10.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
10.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
10.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
9.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
9.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
9.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
9.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
9.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
9.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
9.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
9.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
9.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
9.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
8.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
8.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
8.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
8.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
8.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
8.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
8.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
8.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
7.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
7.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
7.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
7.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
7.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
7.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
7.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
7.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
7.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
7.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
7.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
7.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
6.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
6.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
6.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
6.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
6.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
6.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
6.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
6.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
6.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
6.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
6.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
6.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
6.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
6.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
6.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
6.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
5.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
5.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
5.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
5.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
5.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
5.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
5.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
5.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
5.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
5.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
5.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
5.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
5.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
5.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
5.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
5.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
5.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
5.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
5.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
5.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
5.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
5.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
5.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
5.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
5.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
5.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
4.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
4.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
4.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
4.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
4.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
4.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
4.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
4.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
4.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
4.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
4.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
4.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
4.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
4.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
4.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
4.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
4.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
4.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
4.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
4.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
4.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
4.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
4.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
4.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
3.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
3.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
3.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
3.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
3.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
3.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
3.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
3.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
3.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
3.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
3.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
3.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
3.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
3.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
3.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
3.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
3.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
3.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
3.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
3.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
3.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
3.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
3.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
3.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
2.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
2.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
2.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
2.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
2.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
2.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
2.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
2.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
2.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
2.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
2.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
2.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
2.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
2.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
1.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
1.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
1.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
1.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
967
Tumor
1.2
214
Normal
1.2
557
Tumor
1.1
553
Tumor
1.1
1021
Tumor
0.9
817
Tumor
0.9
277
Tumor
0.9
983
Tumor
0.8
641
Tumor
0.8
695
Tumor
0.8
977
Tumor
0.8
627
Tumor
0.8
975
Tumor
0.8
213
Tumor
0.7
951
Tumor
0.7
865
Tumor
0.7
823
Tumor
0.7
697
Tumor
0.7
227
Tumor
0.7
881
Tumor
0.7
286
Normal
0.7
568
Normal
0.6
285
Tumor
0.6
558
Normal
0.6
743
Tumor
0.6
498
Normal
0.6
572
Normal
0.6
1015
Tumor
0.5
642
Normal
0.5
696
Normal
0.5
722
Normal
0.5
863
Tumor
0.5
1044
Normal
0.5
868
Normal
0.5
218
Normal
0.5
723
Tumor
0.5
113
Tumor
0.5
862
Normal
0.5
778
Normal
0.5
267
Tumor
0.5
488
Normal
0.5
944
Normal
0.5
416
Normal
0.5
513
Tumor
0.5
1046
Normal
0.5
327
Tumor
0.5
526
Normal
0.5
636
Normal
0.5
494
Normal
0.5
714
Normal
0.5
1041
Tumor
0.4
786
Normal
0.4
963
Tumor
0.4
816
Normal
0.4
571
Tumor
0.4
487
Tumor
0.4
356
Normal
0.4
567
Tumor
0.4
135
Tumor
0.4
368
Normal
0.4
493
Tumor
0.4
1026
Normal
0.4
364
Normal
0.4
232
Normal
0.4
188
Normal
0.4
926
Normal
0.4
376
Normal
0.4
492
Normal
0.4
824
Normal
0.4
554
Normal
0.4
698
Normal
0.4
746
Normal
0.4
756
Normal
0.4
427
Tumor
0.4
1045
Tumor
0.4
968
Normal
0.4
447
Tumor
0.4
217
Tumor
0.4
484
Normal
0.4
436
Normal
0.4
918
Normal
0.3
917
Tumor
0.3
955
Tumor
0.3
954
Normal
0.3
124
Normal
0.3
452
Normal
0.3
468
Normal
0.3
456
Normal
0.3
481
Tumor
0.3
1022
Normal
0.3
852
Normal
0.3
864
Normal
0.3
426
Normal
0.3
884
Normal
0.3
392
Normal
0.3
132
Normal
0.3
564
Normal
0.3
618
Normal
0.3
724
Normal
0.3
328
Normal
0.3
414
Normal
0.3
424
Normal
0.3
472
Normal
0.3
433
Tumor
0.3
874
Normal
0.3
422
Normal
0.3
412
Normal
0.3
956
Normal
0.3
528
Normal
0.3
221
Tumor
0.3
446
Normal
0.3
111
Normal
0.3
1032
Normal
0.3
527
Tumor
0.3
114
Normal
0.3
191
Tumor
0.3
142
Normal
0.3
964
Normal
0.3
1014
Normal
0.3
514
Normal
0.3
366
Normal
0.3
1016
Normal
0.3
112
Tumor
0.3
1025
Tumor
0.3
716
Normal
0.3
258
Normal
0.3
1013
Tumor
0.3
713
Tumor
0.3
982
Normal
0.3
686
Normal
0.3
343
Tumor
0.2
483
Tumor
0.2
466
Normal
0.2
861
Tumor
0.2
966
Normal
0.2
195
Tumor
0.2
284
Normal
0.2
477
Tumor
0.2
428
Normal
0.2
914
Normal
0.2
728
Normal
0.2
938
Normal
0.2
742
Normal
0.2
546
Normal
0.2
518
Normal
0.2
672
Normal
0.2
145
Tumor
0.2
344
Normal
0.2
482
Normal
0.2
448
Normal
0.2
785
Tumor
0.2
534
Normal
0.2
1028
Normal
0.2
867
Tumor
0.2
126
Normal
0.2
737
Tumor
0.2
573
Tumor
0.2
313
Tumor
0.2
978
Normal
0.2
616
Normal
0.2
818
Normal
0.2
958
Normal
0.2
138
Normal
0.2
473
Tumor
0.2
666
Normal
0.2
721
Tumor
0.2
1031
Tumor
0.2
648
Normal
0.2
332
Normal
0.2
148
Normal
0.2
262
Normal
0.2
362
Normal
0.2
136
Normal
0.2
617
Tumor
0.2
524
Normal
0.2
976
Normal
0.2
423
Tumor
0.2
984
Normal
0.2
395
Tumor
0.2
361
Tumor
0.2
257
Tumor
0.2
574
Normal
0.2
162
Normal
0.2
478
Normal
0.1
628
Normal
0.1
474
Normal
0.1
1042
Normal
0.1
272
Normal
0.1
415
Tumor
0.1
924
Normal
0.1
384
Normal
0.1
312
Normal
0.1
462
Normal
0.1
396
Normal
0.1
813
Tumor
0.1
186
Normal
0.1
922
Normal
0.1
388
Normal
0.1
224
Normal
0.1
222
Normal
0.1
196
Normal
0.1
536
Normal
0.1
141
Tumor
0.1
127
Tumor
0.1
128
Normal
0.1
464
Normal
0.1
937
Tumor
0.1
912
Normal
0.1
228
Normal
0.1
538
Normal
0.1
882
Normal
0.1
212
Normal
0.1
913
Tumor
0.1
352
Normal
0.1
662
Normal
0.1
814
Normal
0.1
516
Normal
0.1
952
Normal
0.1
537
Tumor
0.1
375
Tumor
0.1
916
Normal
0.1
878
Normal
0.1
451
Tumor
0.1
465
Tumor
0.1
365
Tumor
0.1
517
Tumor
0.1
268
Normal
0.1
341
Tumor
0.1
394
Normal
0.1
525
Tumor
0.1
858
Normal
0.1
297
Tumor
0.1
851
Tumor
0.0
147
Tumor
0.0
298
Normal
0.0
393
Tumor
0.0
146
Normal
0.0
161
Tumor
0.0
671
Tumor
0.0
738
Normal
0.0
1027
Tumor
0.0
354
Normal
0.0
192
Normal
0.0
877
Tumor
0.0
515
Tumor
0.0
866
Normal
0.0
883
Tumor
0.0
664
Normal
0.0
943
Tumor
0.0
411
Tumor
0.0
385
Tumor
0.0
435
Tumor
0.0
231
Tumor
0.0
413
Tumor
0.0
857
Tumor
0.0
467
Tumor
0.0
911
Tumor
0.0
172
Normal
0.0
314
Normal
0.0
957
Tumor
0.0
386
Normal
-0.1
715
Tumor
-0.1
363
Tumor
-0.1
497
Tumor
-0.1
278
Normal
-0.1
471
Tumor
-0.1
685
Tumor
-0.1
444
Normal
-0.1
741
Tumor
-0.1
271
Tumor
-0.1
635
Tumor
-0.1
647
Tumor
-0.1
432
Normal
-0.1
615
Tumor
-0.1
342
Normal
-0.1
491
Tumor
-0.1
434
Normal
-0.1
873
Tumor
-0.1
953
Tumor
-0.1
545
Tumor
-0.1
353
Tumor
-0.1
358
Normal
-0.1
661
Tumor
-0.1
123
Tumor
-0.2
745
Tumor
-0.2
355
Tumor
-0.2
431
Tumor
-0.2
915
Tumor
-0.2
777
Tumor
-0.2
125
Tumor
-0.2
744
Normal
-0.2
461
Tumor
-0.2
311
Tumor
-0.2
533
Tumor
-0.2
187
Tumor
-0.2
965
Tumor
-0.2
137
Tumor
-0.2
923
Tumor
-0.2
383
Tumor
-0.2
171
Tumor
-0.2
421
Tumor
-0.3
755
Tumor
-0.3
131
Tumor
-0.3
387
Tumor
-0.3
663
Tumor
-0.3
391
Tumor
-0.3
921
Tumor
-0.3
523
Tumor
-0.4
665
Tumor
-0.4
331
Tumor
-0.4
261
Tumor
-0.4
563
Tumor
-0.4
981
Tumor
-0.4
925
Tumor
-0.4
283
Tumor
-0.4
815
Tumor
-0.5
1043
Tumor
-0.5
185
Tumor
-0.5
463
Tumor
-0.5
445
Tumor
-0.6
367
Tumor
-0.6
425
Tumor
-0.6
443
Tumor
-0.7
455
Tumor
-0.8
223
Tumor
-0.8
351
Tumor
-0.9
211
Tumor
-0.9
357
Tumor
-0.9
535
Tumor
-0.9
727
Tumor
-1.0
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
