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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
86.0
nTPM
HPA Brain:
48.9
nTPM
GTEx:
86.0
nTPM
FANTOM5:
168.6
Scaled Tags Per Million
Pig:
33.4
nTPM
Mouse:
85.8
nTPM
Allen mouse:
7.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
48.9
Sample id
Sample description
nTPM
Amygdala nTPM: 48.1
2695
Female, age 67, right hemisphere
58.8
2814
Male, age 76, right hemisphere
48.5
2514
Male, age 75, right hemisphere
46.9
2517
Female, age 94, left hemisphere
45.5
1987
Female, age 91, left hemisphere
40.5
Basal amygdala nTPM: 44.7
2609
Male, age 75, right hemisphere
53.0
2827
Female, age 67, right hemisphere
51.8
2685
Female, age 94, left hemisphere
43.6
2243
Female, age 91, right hemisphere
40.5
1955
Male, age 76, both hemispheres
40.2
2110
Male, age 80, left hemisphere
39.3
Central amygdala nTPM: 48.4
2826
Female, age 94, left hemisphere
61.2
2515
Male, age 75, right hemisphere
52.3
1905
Male, age 76, both hemispheres
45.8
2239
Male, age 80, left hemisphere
41.3
2701
Female, age 91, right hemisphere
41.1
Corticomedial amygdala nTPM: 41.2
2428
Male, age 75, right hemisphere
48.9
2535
Female, age 67, right hemisphere
44.4
2829
Male, age 80, left hemisphere
40.3
2240
Male, age 76, both hemispheres
39.1
2429
Female, age 94, left hemisphere
37.5
2242
Female, age 91, right hemisphere
37.2
Lateral amygdala nTPM: 48.9
2830
Female, age 67, right hemisphere
59.6
2516
Male, age 75, right hemisphere
50.4
2534
Female, age 94, left hemisphere
49.4
2256
Male, age 80, left hemisphere
47.6
1883
Male, age 76, both hemispheres
44.3
2255
Female, age 91, right hemisphere
42.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
86.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 86.0
Samples: 152
Max nTPM: 139.1
Min nTPM: 57.4
Std nTPM: 13.0
Median nTPM: 86.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
139.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
125.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
118.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
108.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
107.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
107.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
106.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
106.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
105.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
104.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
104.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
103.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
103.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
102.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
102.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
101.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
100.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
100.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
99.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
99.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
99.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
99.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
98.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
98.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
98.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
97.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
97.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
97.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
96.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
96.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
96.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
95.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
95.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
95.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
94.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
94.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
94.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
93.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
93.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
93.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
93.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
93.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
92.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
92.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
92.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
92.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
92.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
91.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
90.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
90.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
90.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
90.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
90.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
89.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
89.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
89.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
89.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
89.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
89.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
89.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
89.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
89.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
89.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
88.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
88.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
88.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
88.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
88.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
87.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
87.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
87.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
87.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
86.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
86.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
86.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
86.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
85.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
85.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
85.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
85.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
85.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
85.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
85.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
85.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
84.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
84.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
84.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
83.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
83.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
83.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
83.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
83.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
83.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
83.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
82.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
82.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
82.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
81.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
81.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
81.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
80.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
80.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
80.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
79.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
79.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
79.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
79.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
78.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
78.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
78.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
78.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
78.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
77.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
77.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
77.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
77.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
77.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
76.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
76.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
75.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
75.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
74.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
74.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
73.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
72.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
72.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
72.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
72.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
72.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
71.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
71.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
70.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
70.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
70.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
69.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
69.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
68.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
68.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
67.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
67.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
67.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
66.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
65.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
65.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
64.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
64.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
63.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
63.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
61.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
61.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
59.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
57.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
85.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 85.8
Samples: 4
Max nTPM: 99.2
Min nTPM: 72.3
Sample A
Male
72.3
Sample B
Male
80.8
Sample C
Female
99.2
Sample D
Female
90.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.