HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:7.0 nTPM
HPA Brain:83.0 nTPM
GTEx:7.0 nTPM
FANTOM5:36.6 Scaled Tags Per Million
Pig:30.9 nTPM
Mouse:30.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 83.0
Sample id Sample description nTPM
Hippocampus
nTPM: 57.0
2621 Female, age 67, right hemisphere 70.4
1911 Female, age 85, right hemisphere 66.9
2148 Female, age 91, left hemisphere 63.6
1855 Male, age 76, left hemisphere 53.6
1898 Male, age 80, left hemisphere 48.2
2529 Female, age 94, left hemisphere 39.3
Dentate gyrus
nTPM: 57.7
1927 Female, age 91, both hemispheres 104.4
2531 Female, age 67, both hemispheres 66.3
2010 Male, age 76, both hemispheres 46.9
2246 Female, age 85, both hemispheres 44.8
2530 Female, age 94, left hemisphere 43.5
2528 Male, age 74, both hemispheres 40.2
Entorhinal gyrus
nTPM: 60.2
1938 Female, age 85, left hemisphere 81.0
2613 Female, age 94, left hemisphere 79.0
2764 Male, age 80, right hemisphere 64.1
2686 Male, age 75, right hemisphere 62.1
1787 Male, age 76, left hemisphere 45.6
2117 Female, age 91, right hemisphere 29.1
Hippocampus, CA1
nTPM: 83.0
2749 Male, age 80, left hemisphere 160.0
1873 Female, age 85, both hemispheres 82.2
2045 Male, age 76, both hemispheres 73.0
2527 Male, age 74, both hemispheres 58.9
2082 Female, age 91, right hemisphere 40.7
Hippocampus, CA2
nTPM: 48.9
1963 Male, age 80, left hemisphere 73.5
1892 Male, age 76, both hemispheres 52.7
2113 Female, age 91, right hemisphere 48.6
2249 Male, age 74, both hemispheres 45.1
1940 Female, age 85, left hemisphere 37.9
2437 Female, age 94, left hemisphere 35.4
Hippocampus, CA3
nTPM: 72.6
2137 Male, age 80, left hemisphere 139.9
2620 Female, age 94, left hemisphere 72.9
2861 Female, age 67, both hemispheres 68.1
1867 Male, age 76, both hemispheres 59.4
1891 Female, age 85, both hemispheres 49.0
2436 Male, age 74, both hemispheres 46.6
Parahippocampal cortex
nTPM: 57.5
1850 Male, age 80, both hemispheres 94.6
2245 Female, age 91, both hemispheres 68.5
1990 Female, age 91, right hemisphere 63.7
2532 Female, age 72, left hemisphere 62.1
1933 Female, age 85, both hemispheres 58.2
2622 Female, age 67, right hemisphere 53.7
2018 Male, age 76, both hemispheres 49.0
2692 Male, age 74, both hemispheres 45.3
2693 Female, age 94, both hemispheres 40.7
2250 Female, age 67, right hemisphere 38.7
Perirhinal gyrus
nTPM: 68.8
1847 Female, age 91, left hemisphere 84.7
1841 Female, age 85, right hemisphere 80.0
1794 Male, age 80, right hemisphere 69.0
2848 Male, age 76, right hemisphere 67.6
2521 Female, age 94, right hemisphere 42.6
Subiculum
nTPM: 46.3
2042 Male, age 76, both hemispheres 66.0
1901 Male, age 80, both hemispheres 63.2
1977 Female, age 85, both hemispheres 46.2
2438 Female, age 94, left hemisphere 38.5
2729 Female, age 91, right hemisphere 37.3
2619 Male, age 74, both hemispheres 26.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 7.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.0
Samples: 197

Max nTPM: 29.4
Min nTPM: 0.4
Std nTPM: 4.3
Median nTPM: 6.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 29.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 24.1
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 19.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 18.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 16.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 16.3
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 14.8
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 14.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 14.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 14.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 14.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 36.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.6
FF:10169-103B7 60 years, female 46.7
FF:10153-102I9 76 years, female 26.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 30.9
Pig sample Sample description nTPM
Subiculum
nTPM: 25.9
Samples: 4

Max nTPM: 35.4
Min nTPM: 21.4
Sample A Female 35.4
Sample B Female 23.3
Sample C Male 23.5
Sample D Male 21.4
Dorsal hippocampus
nTPM: 30.9
Samples: 4

Max nTPM: 38.3
Min nTPM: 21.9
Sample A Female 35.3
Sample B Female 28.2
Sample C Male 21.9
Sample D Male 38.3
Entorhinal cortex
nTPM: 20.7
Samples: 4

Max nTPM: 24.4
Min nTPM: 15.0
Sample A Female 15.0
Sample B Female 22.7
Sample C Male 24.4
Sample D Male 20.8
Ventral hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 23.9
Min nTPM: 22.3
Sample A Female 23.9
Sample B Female 22.6
Sample C Male 22.3
Sample D Male 23.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 30.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.8
Samples: 4

Max nTPM: 24.7
Min nTPM: 18.2
Sample A Male 18.2
Sample B Male 21.2
Sample C Female 24.7
Sample D Female 23.1
Hippocampal formation
nTPM: 30.0
Samples: 4

Max nTPM: 31.8
Min nTPM: 27.8
Sample A Male 31.1
Sample B Male 31.8
Sample C Female 29.3
Sample D Female 27.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
75985954 Antisense, RP_060606_02_C07, Mouse strain C57BL/6J (56 days, male) 0.1

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