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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPN2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
158.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
122.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
112.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
81.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
80.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
76.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
73.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
72.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
72.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
64.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
64.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
63.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
54.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
53.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
53.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
48.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
48.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
38.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
38.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
34.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
22.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
22.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
21.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
20.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
20.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
19.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
19.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
16.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
15.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
14.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
14.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
14.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
13.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
13.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
12.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
12.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
12.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
12.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
11.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
11.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
11.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
10.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
8.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
7.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPN2 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
48.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
47.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
39.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
37.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
37.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
36.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
35.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
33.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
33.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
32.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
31.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
31.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
31.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
30.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
30.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
30.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
29.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
28.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
28.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
28.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
27.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
27.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
27.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
27.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
27.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
26.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
26.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
26.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
26.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
26.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
26.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
26.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
25.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
25.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
25.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
25.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
24.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
24.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
24.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
24.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
24.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
24.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
24.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
24.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
23.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
23.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
23.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
23.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
23.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
23.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
23.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
23.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
23.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
23.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
23.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
23.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
23.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
23.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
22.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
22.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
22.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
22.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
22.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
22.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
22.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
22.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
22.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
21.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
21.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
21.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
21.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
21.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
21.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
21.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
21.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
21.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
21.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
21.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
21.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
21.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
21.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
21.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
21.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
20.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
20.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
20.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
20.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
20.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
20.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
20.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
20.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
20.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
20.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
20.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
20.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
20.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
20.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
20.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
20.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
20.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
19.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
19.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
19.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
19.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
19.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
19.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
19.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
19.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
19.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
19.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
19.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
19.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
19.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
19.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
19.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
19.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
19.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
19.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
19.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
19.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
19.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
19.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
19.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
19.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
19.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
18.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
18.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
18.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
18.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
18.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
18.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
18.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
18.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
18.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
18.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
18.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
18.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
18.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
18.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
18.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
18.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
18.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
18.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
18.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
18.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
18.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
18.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
18.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
18.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
18.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
18.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
18.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
18.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
18.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
18.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
18.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
17.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
17.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
17.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
17.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
17.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
17.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
17.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
17.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
17.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
17.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
17.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
17.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
17.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
17.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
17.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
17.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
17.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
17.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
17.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
17.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
17.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
17.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
17.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
17.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
17.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
17.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
17.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
17.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
17.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
17.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
17.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
17.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
17.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
17.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
17.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
17.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
17.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
17.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
17.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
17.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
17.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
17.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
17.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
17.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
16.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
16.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
16.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
16.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
16.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
16.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
16.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
16.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
16.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
16.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
16.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
16.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
16.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
16.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
16.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
16.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
16.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
16.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
16.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
16.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
16.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
16.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
16.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
16.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
16.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
16.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
16.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
16.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
16.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
16.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
16.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
16.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
16.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
16.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
16.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
16.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
16.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
16.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
16.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
16.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
16.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
16.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
16.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
15.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
15.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
15.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
15.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
15.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
15.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
15.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
15.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
15.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
15.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
15.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
15.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
15.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
15.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
15.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
15.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
15.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
15.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
15.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
15.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
15.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
15.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
15.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
15.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
15.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
15.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
15.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
15.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
15.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
15.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
15.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
14.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
14.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
14.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
14.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
14.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
14.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
14.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
14.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
14.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
14.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
14.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
14.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
14.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
14.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
14.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
14.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
14.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
14.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
14.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
14.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
14.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
14.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
14.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
13.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
13.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
13.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
13.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
13.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
13.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
13.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
13.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
12.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
12.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
12.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
12.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
12.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
12.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
12.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
12.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
12.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
12.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
12.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
12.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
12.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
12.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
11.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
11.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
11.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
11.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
11.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
11.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
10.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
10.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
10.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
10.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
10.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
10.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
10.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
10.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
10.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
8.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
8.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
8.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
8.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
6.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
6.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
6.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPN2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
40.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
40.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
34.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
34.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
33.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
32.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
32.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
30.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
30.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
30.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
28.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
28.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
27.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
27.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
27.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
26.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
26.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
26.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
25.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
25.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
24.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
24.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
24.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
23.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
23.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
23.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
23.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
23.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
22.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
22.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
22.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
22.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
22.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
22.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
21.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
21.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
21.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
21.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
20.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
20.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
20.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
20.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
20.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
19.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
19.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
19.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
19.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
19.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
19.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
19.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
18.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
18.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
18.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
18.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
18.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
18.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
18.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
17.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
17.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
17.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
17.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
17.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
17.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
16.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
16.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
16.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
16.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
16.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
15.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
15.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
15.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
14.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
14.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
11.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
10.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
10.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
9.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
9.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPN2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
266.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
204.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
184.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
183.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
164.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
161.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
160.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
157.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
152.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
144.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
136.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
134.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
129.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
126.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
125.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
122.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
117.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
116.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
107.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
104.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
103.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
102.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
101.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
101.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
100.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
98.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
94.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
93.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
92.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
89.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
87.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
86.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
84.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
83.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
83.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
83.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
73.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
72.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
70.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
68.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
66.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
61.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
59.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
57.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
55.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
53.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
49.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
48.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
47.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
45.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
44.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
42.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
42.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
42.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
40.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
38.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
37.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
35.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
29.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
28.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
27.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
25.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
24.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
24.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
24.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
24.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
23.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
23.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
23.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
22.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
22.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
22.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
22.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
22.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
22.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
21.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
21.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
21.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
21.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
21.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
21.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
20.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
20.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
20.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
20.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
20.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
20.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
20.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
19.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
19.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
19.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
19.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
19.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
19.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
19.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
19.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
18.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
18.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
18.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
18.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
17.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
17.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
17.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
17.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
17.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
17.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
17.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
17.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
17.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
17.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
16.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
16.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
16.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
16.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
16.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
16.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
16.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
16.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
16.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
15.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
15.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
15.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
15.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
15.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
15.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
15.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
15.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
15.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
15.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
15.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
15.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
15.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
14.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
14.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
14.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
14.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
14.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
14.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
14.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
14.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
13.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
13.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
13.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
13.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
13.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
13.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
13.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
12.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
12.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
12.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
12.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
12.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
12.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
12.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
12.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
12.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
11.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
11.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
11.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
11.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
11.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
11.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
10.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
10.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
10.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
10.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
10.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
10.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
10.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
10.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
10.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
9.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
9.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
9.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
9.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
9.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
8.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
8.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
8.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
8.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
7.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
6.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
5.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
4.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
1.0
CPT0088550004
Tumor
0.8
CPT0081880003
Tumor
0.8
CPT0011410003
Tumor
0.6
CPT0076330003
Tumor
0.6
CPT0063630003
Tumor
0.6
CPT0078660003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0085670003
Tumor
0.5
CPT0092290003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0092730003
Tumor
0.4
CPT0025050003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0092190003
Normal
0.3
CPT0079380003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0081600003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0066480003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0084590001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0014370004
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0075170001
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0007860003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0077110003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0086970003
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0025880003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0078940001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0078830003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0000870016
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0063640001
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0086370003
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0012550003
Tumor
-0.2
CPT0009080003
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0007320003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0001510001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0001340003
Tumor
-0.2
CPT0025060001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0012090003
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0065450001
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0088920001
Normal
-0.3
CPT0023710001
Normal
-0.3
CPT0006950001
Normal
-0.3
CPT0012570003
Normal
-0.3
CPT0024680001
Normal
-0.3
CPT0012920003
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0019130003
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0009020003
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0001230001
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0024670003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
