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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMD2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
197.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
98.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
89.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
87.6
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
87.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
86.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
84.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
84.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
83.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
81.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
79.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
79.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
78.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
76.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
74.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
73.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
72.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
70.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
69.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
68.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
65.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
65.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
63.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
63.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
63.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
62.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
62.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
61.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
61.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
61.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
56.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
56.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
55.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
55.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
55.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
53.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
52.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
52.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
52.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
50.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
48.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
46.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
44.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
42.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
42.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
41.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
41.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
41.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
38.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
37.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
36.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
36.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
35.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
34.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
34.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
33.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
33.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
32.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
28.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
21.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
20.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
20.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
9.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMD2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
62.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
202.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
191.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
189.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
188.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
182.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
143.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
132.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
131.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
131.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
130.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
125.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
119.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
116.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
115.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
114.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
111.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
110.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
108.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
108.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
108.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
106.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
106.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
106.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
105.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
104.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
104.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
103.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
101.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
101.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
100.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
100.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
100.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
100.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
98.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
97.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
97.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
96.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
96.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
96.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
95.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
95.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
94.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
94.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
94.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
93.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
92.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
91.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
91.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
89.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
89.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
89.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
89.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
89.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
88.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
87.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
87.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
87.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
87.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
86.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
86.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
86.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
86.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
86.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
86.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
86.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
86.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
85.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
85.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
85.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
85.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
85.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
85.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
85.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
84.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
84.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
84.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
84.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
84.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
83.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
83.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
83.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
83.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
82.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
82.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
82.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
82.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
82.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
82.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
81.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
81.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
81.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
81.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
81.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
81.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
81.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
81.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
80.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
80.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
80.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
80.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
80.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
79.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
79.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
79.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
79.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
79.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
78.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
78.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
78.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
78.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
78.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
78.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
78.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
78.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
78.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
78.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
77.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
77.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
77.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
77.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
77.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
77.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
77.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
77.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
77.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
76.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
76.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
76.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
76.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
76.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
76.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
76.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
76.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
76.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
76.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
76.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
75.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
75.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
75.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
75.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
75.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
74.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
74.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
74.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
74.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
74.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
74.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
74.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
74.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
74.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
73.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
73.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
73.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
73.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
73.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
73.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
73.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
73.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
72.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
72.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
72.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
72.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
72.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
72.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
72.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
71.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
71.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
71.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
71.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
71.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
71.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
71.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
70.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
70.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
70.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
70.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
70.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
70.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
70.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
70.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
69.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
69.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
69.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
69.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
69.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
69.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
69.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
69.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
69.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
69.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
69.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
68.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
68.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
68.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
68.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
68.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
68.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
68.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
68.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
68.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
68.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
68.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
68.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
67.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
67.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
67.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
67.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
67.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
67.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
67.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
67.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
67.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
66.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
66.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
66.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
66.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
66.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
66.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
66.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
66.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
65.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
65.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
65.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
65.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
65.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
65.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
65.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
65.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
65.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
65.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
65.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
65.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
65.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
64.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
64.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
64.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
64.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
64.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
64.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
64.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
64.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
64.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
64.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
64.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
64.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
63.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
63.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
63.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
63.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
63.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
63.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
63.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
62.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
62.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
62.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
62.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
62.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
61.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
61.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
61.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
61.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
61.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
60.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
60.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
60.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
60.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
60.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
60.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
60.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
60.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
60.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
60.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
60.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
59.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
59.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
59.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
59.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
59.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
59.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
59.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
58.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
58.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
58.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
58.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
58.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
58.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
58.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
58.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
58.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
58.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
58.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
58.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
57.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
57.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
57.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
57.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
57.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
57.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
56.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
56.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
56.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
56.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
56.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
55.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
55.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
55.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
55.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
55.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
55.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
55.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
55.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
55.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
55.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
55.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
54.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
54.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
54.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
54.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
54.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
54.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
54.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
53.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
53.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
53.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
53.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
53.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
53.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
53.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
53.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
53.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
52.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
52.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
52.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
52.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
52.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
52.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
52.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
52.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
51.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
51.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
51.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
51.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
51.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
51.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
51.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
51.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
51.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
51.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
51.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
50.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
50.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
50.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
50.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
50.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
50.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
50.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
50.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
50.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
50.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
50.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
50.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
50.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
49.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
49.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
49.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
49.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
49.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
49.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
49.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
48.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
48.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
48.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
48.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
48.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
48.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
48.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
48.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
48.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
48.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
47.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
47.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
47.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
47.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
47.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
47.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
47.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
47.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
47.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
47.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
46.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
46.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
46.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
46.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
45.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
45.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
45.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
45.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
45.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
45.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
45.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
45.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
44.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
44.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
44.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
44.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
44.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
44.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
43.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
43.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
43.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
43.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
43.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
42.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
42.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
42.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
42.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
42.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
42.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
41.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
41.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
41.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
41.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
41.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
41.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
41.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
40.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
40.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
40.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
40.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
39.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
39.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
39.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
39.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
39.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
38.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
38.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
38.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
38.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
38.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
37.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
37.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
37.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
37.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
37.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
37.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
37.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
37.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
37.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
37.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
36.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
36.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
36.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
36.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
36.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
36.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
36.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
35.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
35.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
35.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
34.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
34.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
34.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
33.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
33.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
33.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
33.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
32.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
32.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
32.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
32.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
32.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
31.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
31.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
31.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
31.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
31.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
31.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
31.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
31.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
30.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
30.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
30.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
30.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
30.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
30.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
29.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
29.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
29.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
28.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
28.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
28.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
28.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
28.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
28.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
27.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
27.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
27.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
27.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
27.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
26.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
25.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
25.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
24.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
24.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
24.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
24.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
24.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
24.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
24.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
23.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
23.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
22.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
22.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
21.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
20.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
18.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
15.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.3
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMD2 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
69.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
185.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
135.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
130.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
121.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
111.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
111.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
108.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
101.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
97.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
93.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
93.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
89.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
87.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
86.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
84.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
84.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
83.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
83.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
81.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
81.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
81.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
80.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
80.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
79.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
79.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
79.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
77.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
77.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
77.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
76.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
76.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
75.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
74.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
74.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
74.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
73.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
73.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
73.7
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
72.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
71.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
70.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
69.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
69.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
69.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
69.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
68.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
68.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
67.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
67.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
67.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
66.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
65.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
65.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
65.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
64.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
63.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
63.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
62.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
62.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
61.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
61.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
61.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
61.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
61.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
60.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
60.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
59.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
58.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
58.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
58.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
57.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
57.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
56.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
56.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
56.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
55.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
54.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
53.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
53.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
52.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
52.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
52.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
51.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
51.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
51.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
49.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
48.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
45.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
45.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
42.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
42.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
42.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
41.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
41.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
40.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
39.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
36.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
35.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
35.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PSMD2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
68.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
214.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
200.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
183.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
165.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
153.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
145.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
144.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
142.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
141.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
136.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
133.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
132.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
131.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
131.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
131.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
126.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
124.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
120.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
119.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
119.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
119.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
118.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
117.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
114.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
112.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
112.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
111.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
110.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
110.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
108.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
107.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
107.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
107.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
107.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
102.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
101.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
99.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
98.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
97.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
96.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
96.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
95.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
95.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
95.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
94.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
93.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
92.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
91.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
91.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
91.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
90.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
90.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
90.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
90.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
90.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
89.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
89.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
89.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
88.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
88.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
88.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
88.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
88.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
88.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
88.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
87.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
87.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
85.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
85.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
85.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
84.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
84.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
84.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
84.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
83.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
83.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
83.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
83.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
82.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
82.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
80.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
79.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
79.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
79.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
78.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
78.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
78.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
77.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
77.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
76.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
76.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
76.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
76.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
76.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
74.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
74.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
74.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
74.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
74.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
74.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
72.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
72.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
71.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
71.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
71.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
71.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
71.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
71.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
70.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
70.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
70.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
70.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
69.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
69.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
69.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
68.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
67.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
67.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
67.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
66.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
66.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
66.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
66.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
66.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
66.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
65.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
65.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
65.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
65.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
64.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
64.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
64.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
63.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
63.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
63.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
63.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
63.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
63.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
63.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
63.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
63.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
63.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
62.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
62.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
61.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
61.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
61.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
61.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
61.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
61.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
61.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
60.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
60.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
60.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
60.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
60.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
60.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
60.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
59.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
59.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
59.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
58.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
58.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
58.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
57.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
57.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
57.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
57.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
56.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
56.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
55.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
55.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
55.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
55.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
55.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
55.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
54.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
54.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
54.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
54.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
54.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
53.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
53.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
53.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
53.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
53.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
52.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
52.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
52.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
51.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
51.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
50.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
50.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
50.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
50.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
50.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
49.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
49.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
49.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
48.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
48.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
48.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
48.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
47.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
47.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
47.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
46.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
46.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
46.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
46.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
45.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
45.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
45.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
45.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
45.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
45.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
44.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
44.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
44.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
44.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
44.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
44.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
43.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
43.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
43.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
43.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
43.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
43.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
42.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
42.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
42.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
41.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
40.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
40.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
40.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
40.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
39.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
38.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
38.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
37.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
37.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
37.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
37.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
37.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
35.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
35.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
35.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
35.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
35.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
34.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
34.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
34.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
34.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
33.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
33.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
33.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
32.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
30.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
30.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
30.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
29.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
28.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
27.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
27.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
27.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
27.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
26.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
26.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
26.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
26.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
24.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
24.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
24.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
23.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
23.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
23.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
22.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
21.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
20.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
17.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
17.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
10.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088970003
Tumor
0.6
CPT0012550003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0021240003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0025110003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0015730003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0065930003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0023350003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0084560003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0092290003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0012180003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0079180003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0001190001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0006730001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0012640003
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0064400001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0077140001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0077500001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0084590001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0023690003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0065820001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0088550004
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0010160003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0092160003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0009060003
Tumor
-0.3
CPT0089460004
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
