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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YIF1A is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
77.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
151.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
143.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
139.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
125.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
119.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
116.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
115.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
112.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
112.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
111.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
110.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
108.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
107.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
100.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
99.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
99.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
99.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
96.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
94.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
90.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
89.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
86.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
85.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
84.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
83.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
83.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
82.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
81.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
81.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
80.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
80.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
80.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
79.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
78.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
78.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
77.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
72.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
72.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
70.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
68.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
66.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
65.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
63.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
60.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
58.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
57.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
56.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
55.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
52.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
52.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
50.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
49.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
48.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
46.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
45.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
44.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
37.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
36.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
34.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
33.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
32.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
32.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
27.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YIF1A is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
154.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
149.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
137.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
136.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
132.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
126.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
125.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
113.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
111.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
107.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
105.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
102.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
102.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
100.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
97.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
97.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
96.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
94.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
93.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
93.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
92.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
91.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
90.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
90.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
89.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
89.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
89.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
87.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
87.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
86.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
86.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
86.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
86.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
85.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
85.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
83.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
82.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
81.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
79.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
78.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
78.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
78.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
77.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
77.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
76.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
76.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
76.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
76.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
75.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
75.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
75.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
74.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
74.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
74.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
73.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
73.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
73.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
73.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
72.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
72.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
72.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
72.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
72.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
71.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
71.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
71.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
71.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
70.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
70.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
70.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
70.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
70.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
70.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
68.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
68.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
68.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
68.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
67.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
67.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
67.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
67.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
67.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
66.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
66.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
66.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
66.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
66.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
66.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
65.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
65.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
65.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
64.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
64.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
64.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
64.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
64.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
64.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
64.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
64.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
63.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
63.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
63.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
63.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
63.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
63.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
62.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
62.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
62.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
62.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
62.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
62.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
62.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
62.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
61.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
61.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
61.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
61.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
61.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
61.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
61.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
61.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
61.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
61.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
61.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
61.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
61.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
60.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
60.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
60.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
60.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
60.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
60.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
60.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
60.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
60.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
60.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
59.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
59.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
59.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
59.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
59.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
58.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
58.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
58.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
58.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
58.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
58.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
58.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
58.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
58.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
57.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
57.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
57.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
57.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
57.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
57.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
57.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
57.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
57.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
57.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
57.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
57.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
56.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
56.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
56.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
56.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
56.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
56.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
56.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
56.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
56.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
55.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
55.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
55.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
55.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
55.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
55.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
55.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
55.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
55.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
55.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
55.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
54.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
54.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
54.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
54.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
54.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
54.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
54.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
54.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
54.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
54.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
54.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
54.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
54.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
53.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
53.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
53.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
53.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
53.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
53.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
53.1
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
53.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
52.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
52.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
52.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
52.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
52.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
52.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
52.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
52.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
52.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
52.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
52.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
52.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
52.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
52.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
52.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
52.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
51.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
51.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
51.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
51.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
51.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
51.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
51.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
51.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
51.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
51.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
51.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
51.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
51.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
51.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
51.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
50.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
50.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
50.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
50.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
50.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
50.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
50.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
50.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
50.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
50.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
50.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
50.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
50.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
49.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
49.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
49.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
49.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
49.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
49.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
49.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
49.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
49.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
49.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
49.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
49.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
49.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
49.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
48.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
48.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
48.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
48.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
48.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
48.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
48.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
48.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
48.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
48.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
48.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
48.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
48.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
48.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
48.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
48.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
47.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
47.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
47.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
47.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
47.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
47.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
47.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
47.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
47.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
47.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
47.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
47.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
47.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
46.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
46.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
46.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
46.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
46.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
46.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
46.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
46.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
46.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
46.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
46.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
46.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
46.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
46.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
46.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
46.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
46.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
46.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
46.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
45.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
45.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
45.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
45.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
45.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
45.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
45.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
45.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
45.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
45.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
45.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
45.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
45.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
45.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
45.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
45.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
44.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
44.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
44.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
44.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
44.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
44.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
44.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
44.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
44.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
44.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
44.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
44.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
44.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
44.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
44.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
44.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
44.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
44.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
44.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
44.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
44.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
43.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
43.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
43.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
43.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
43.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
43.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
43.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
43.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
43.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
43.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
43.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
43.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
43.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
42.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
42.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
42.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
42.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
42.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
42.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
42.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
42.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
42.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
42.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
41.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
41.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
41.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
41.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
41.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
41.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
41.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
41.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
41.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
41.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
41.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
41.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
41.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
41.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
41.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
41.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
40.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
40.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
40.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
40.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
40.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
40.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
40.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
39.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
39.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
39.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
39.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
39.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
39.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
39.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
39.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
39.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
39.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
39.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
39.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
39.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
39.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
39.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
39.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
39.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
39.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
39.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
39.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
38.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
38.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
38.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
37.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
37.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
37.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
37.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
37.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
37.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
37.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
37.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
37.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
37.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
36.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
36.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
36.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
36.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
36.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
36.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
36.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
36.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
35.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
35.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
35.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
35.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
35.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
35.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
35.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
35.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
35.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
35.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
34.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
34.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
34.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
34.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
34.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
34.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
34.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
33.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
33.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
33.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
33.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
33.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
33.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
33.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
33.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
33.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
33.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
33.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
33.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
33.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
32.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
32.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
32.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
32.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
32.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
31.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
31.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
31.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
31.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
31.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
30.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
30.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
30.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
30.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
29.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
29.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
29.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
29.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
29.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
29.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
29.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
28.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
28.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
28.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
28.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
28.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
27.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
27.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
27.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
27.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
27.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
27.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
27.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
27.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
26.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
26.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
25.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
25.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
25.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
25.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
24.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
24.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
24.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
24.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
24.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
23.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
21.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
19.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
15.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
14.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
11.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
9.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YIF1A is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
108.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
103.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
94.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
90.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
90.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
80.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
76.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
68.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
67.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
67.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
67.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
63.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
62.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
59.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
59.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
56.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
54.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
54.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
53.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
53.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
53.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
53.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
51.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
51.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
50.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
50.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
49.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
49.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
48.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
47.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
47.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
47.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
47.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
46.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
46.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
46.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
46.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
45.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
45.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
45.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
44.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
44.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
44.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
43.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
43.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
43.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
43.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
42.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
42.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
42.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
41.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
41.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
41.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
41.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
41.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
41.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
39.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
38.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
38.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
38.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
38.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
37.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
37.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
37.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
37.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
37.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
36.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
36.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
36.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
36.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
35.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
35.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
33.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
33.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
33.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
31.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
31.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
30.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
30.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
29.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
28.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
28.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
28.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
27.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
25.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
22.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
22.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
22.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
20.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YIF1A is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
68.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
164.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
145.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
141.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
137.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
134.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
132.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
130.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
128.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
125.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
123.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
122.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
119.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
119.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
115.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
115.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
114.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
110.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
109.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
108.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
107.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
106.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
106.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
106.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
105.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
104.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
103.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
103.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
102.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
102.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
101.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
100.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
100.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
99.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
99.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
98.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
98.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
97.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
97.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
97.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
97.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
96.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
95.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
94.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
93.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
93.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
92.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
92.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
91.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
91.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
90.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
89.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
89.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
87.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
86.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
86.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
86.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
86.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
86.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
85.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
85.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
85.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
85.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
85.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
85.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
85.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
84.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
83.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
82.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
82.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
82.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
81.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
81.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
81.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
81.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
80.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
80.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
80.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
80.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
80.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
80.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
80.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
80.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
79.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
79.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
79.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
78.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
78.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
78.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
78.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
77.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
77.5
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
77.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
76.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
76.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
75.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
75.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
75.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
75.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
74.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
74.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
74.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
74.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
73.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
73.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
73.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
72.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
72.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
72.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
72.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
72.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
71.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
71.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
71.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
71.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
71.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
71.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
71.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
71.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
71.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
70.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
70.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
70.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
70.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
69.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
69.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
69.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
69.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
68.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
68.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
67.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
67.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
67.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
67.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
67.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
66.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
66.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
66.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
66.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
66.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
66.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
66.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
66.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
66.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
66.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
65.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
65.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
65.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
65.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
65.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
65.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
64.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
64.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
64.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
64.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
64.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
64.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
63.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
63.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
63.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
63.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
63.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
63.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
62.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
62.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
62.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
62.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
62.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
62.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
61.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
61.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
61.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
61.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
61.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
61.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
60.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
60.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
60.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
60.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
59.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
59.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
59.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
59.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
59.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
58.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
58.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
58.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
58.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
58.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
58.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
58.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
58.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
57.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
57.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
57.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
57.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
57.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
56.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
56.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
55.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
55.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
55.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
55.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
55.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
55.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
55.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
55.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
54.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
54.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
53.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
53.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
53.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
53.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
53.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
53.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
52.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
52.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
52.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
51.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
51.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
50.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
50.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
50.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
49.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
49.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
49.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
49.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
49.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
49.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
48.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
48.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
47.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
47.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
47.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
46.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
46.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
46.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
46.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
45.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
44.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
44.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
44.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
43.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
42.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
42.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
42.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
41.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
41.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
40.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
39.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
39.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
39.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
39.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
39.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
38.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
38.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
38.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
38.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
37.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
37.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
35.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
35.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
34.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
34.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
32.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
32.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
31.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
29.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
29.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
28.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
28.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
27.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
24.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
24.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
22.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
21.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
21.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
20.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
18.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
16.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
9.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0015730003
Tumor
1.8
CPT0025290003
Tumor
1.4
CPT0025170003
Tumor
1.1
CPT0065810003
Tumor
1.0
CPT0065750003
Tumor
1.0
CPT0089460004
Tumor
1.0
CPT0081880003
Tumor
1.0
CPT0023690003
Tumor
0.9
CPT0001340003
Tumor
0.9
CPT0078930003
Tumor
0.9
CPT0086030003
Tumor
0.9
CPT0020120003
Tumor
0.9
CPT0092290003
Tumor
0.9
CPT0077310003
Tumor
0.8
CPT0086360003
Tumor
0.8
CPT0065690003
Tumor
0.7
CPT0006630003
Tumor
0.7
CPT0064370003
Tumor
0.7
CPT0078660003
Tumor
0.7
CPT0007860003
Tumor
0.7
CPT0002350011
Tumor
0.6
CPT0006900003
Tumor
0.6
CPT0014160003
Tumor
0.6
CPT0086820003
Tumor
0.6
CPT0065930003
Tumor
0.6
CPT0069160003
Tumor
0.6
CPT0015910003
Tumor
0.6
CPT0078800003
Tumor
0.5
CPT0079270003
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0092730003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0012280003
Tumor
0.4
CPT0075560003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0088480003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0007320003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0075130003
Tumor
0.2
CPT0088780001
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0086370003
Normal
0.2
CPT0002270011
Tumor
0.2
CPT0065820001
Normal
0.2
CPT0066480003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0088900003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0089480003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0079480003
Tumor
0.0
CPT0001350001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0001180009
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0079180003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0007870001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0088550004
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0079230003
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0014450004
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0009080003
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0081990003
Tumor
-0.3
CPT0086970003
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0012920003
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0010110003
Tumor
-0.3
CPT0014130001
Normal
-0.3
CPT0088630003
Tumor
-0.3
CPT0012290003
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0025110003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0002370001
Normal
-0.3
CPT0079300001
Normal
-0.4
CPT0079510001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0012080003
Tumor
-0.4
CPT0077110003
Tumor
-0.4
CPT0011410003
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0000640003
Tumor
-0.4
CPT0088570001
Normal
-0.4
CPT0012370003
Tumor
-0.4
CPT0075170001
Normal
-0.4
CPT0078530001
Normal
-0.4
CPT0012770003
Normal
-0.4
CPT0075570001
Normal
-0.5
CPT0063330001
Normal
-0.5
CPT0012090003
Normal
-0.5
CPT0017410003
Tumor
-0.5
CPT0078830003
Tumor
-0.5
CPT0012570003
Normal
-0.5
CPT0024680001
Normal
-0.5
CPT0025350003
Tumor
-0.5
CPT0075720003
Tumor
-0.5
CPT0084560003
Tumor
-0.6
CPT0011240003
Tumor
-0.6
CPT0084590001
Normal
-0.6
CPT0081600003
Tumor
-0.6
CPT0006950001
Normal
-0.6
CPT0014470001
Normal
-0.6
CPT0018250001
Normal
-0.6
CPT0012640003
Normal
-0.6
CPT0025610001
Normal
-0.7
CPT0077490003
Tumor
-0.8
CPT0017850003
Tumor
-0.8
CPT0081620001
Normal
-0.8
CPT0071150004
Tumor
-0.9
CPT0010120001
Normal
-1.1
CPT0026410003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0006440003
Tumor
N/A
CPT0020020001
Normal
N/A
CPT0066470004
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0026420001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.