HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:27.7 nTPM
HPA Brain:26.7 nTPM
GTEx:27.7 nTPM
FANTOM5:20.3 Scaled Tags Per Million
Pig:16.4 nTPM
Mouse:23.7 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076194
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 26.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.7
2529 Female, age 94, left hemisphere 30.1
2148 Female, age 91, left hemisphere 29.8
2621 Female, age 67, right hemisphere 26.3
1911 Female, age 85, right hemisphere 25.7
1898 Male, age 80, left hemisphere 25.2
1855 Male, age 76, left hemisphere 23.5
Dentate gyrus
nTPM: 25.3
2530 Female, age 94, left hemisphere 32.0
2528 Male, age 74, both hemispheres 28.3
2246 Female, age 85, both hemispheres 24.1
1927 Female, age 91, both hemispheres 24.0
2010 Male, age 76, both hemispheres 22.6
2531 Female, age 67, both hemispheres 21.1
Entorhinal gyrus
nTPM: 21.8
2117 Female, age 91, right hemisphere 29.4
2764 Male, age 80, right hemisphere 21.5
1787 Male, age 76, left hemisphere 20.9
2613 Female, age 94, left hemisphere 20.1
1938 Female, age 85, left hemisphere 19.5
2686 Male, age 75, right hemisphere 19.4
Hippocampus, CA1
nTPM: 24.8
2527 Male, age 74, both hemispheres 29.2
2749 Male, age 80, left hemisphere 28.5
1873 Female, age 85, both hemispheres 25.0
2082 Female, age 91, right hemisphere 24.1
2045 Male, age 76, both hemispheres 17.3
Hippocampus, CA2
nTPM: 25.4
2249 Male, age 74, both hemispheres 32.3
1963 Male, age 80, left hemisphere 31.6
1940 Female, age 85, left hemisphere 24.8
2437 Female, age 94, left hemisphere 22.7
2113 Female, age 91, right hemisphere 21.8
1892 Male, age 76, both hemispheres 19.1
Hippocampus, CA3
nTPM: 25.6
2620 Female, age 94, left hemisphere 32.7
2436 Male, age 74, both hemispheres 31.5
2861 Female, age 67, both hemispheres 26.8
2137 Male, age 80, left hemisphere 22.0
1891 Female, age 85, both hemispheres 21.7
1867 Male, age 76, both hemispheres 18.9
Parahippocampal cortex
nTPM: 19.9
2250 Female, age 67, right hemisphere 23.3
1933 Female, age 85, both hemispheres 22.4
1990 Female, age 91, right hemisphere 21.6
2245 Female, age 91, both hemispheres 21.5
2692 Male, age 74, both hemispheres 19.5
2693 Female, age 94, both hemispheres 19.4
2532 Female, age 72, left hemisphere 19.0
2622 Female, age 67, right hemisphere 18.0
2018 Male, age 76, both hemispheres 17.8
1850 Male, age 80, both hemispheres 17.1
Perirhinal gyrus
nTPM: 19.8
1794 Male, age 80, right hemisphere 22.7
1841 Female, age 85, right hemisphere 21.3
1847 Female, age 91, left hemisphere 19.1
2848 Male, age 76, right hemisphere 18.8
2521 Female, age 94, right hemisphere 17.2
Subiculum
nTPM: 23.1
2619 Male, age 74, both hemispheres 24.8
2438 Female, age 94, left hemisphere 23.9
1977 Female, age 85, both hemispheres 23.3
2729 Female, age 91, right hemisphere 23.1
2042 Male, age 76, both hemispheres 22.2
1901 Male, age 80, both hemispheres 21.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 27.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.7
Samples: 197

Max nTPM: 58.3
Min nTPM: 12.4
Std nTPM: 7.7
Median nTPM: 27.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 58.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 46.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 46.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 46.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 46.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 46.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 45.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 45.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 44.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 43.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 42.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 20.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.3
FF:10153-102I9 76 years, female 25.1
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 16.4
Pig sample Sample description nTPM
Subiculum
nTPM: 14.1
Samples: 4

Max nTPM: 16.0
Min nTPM: 11.7
Sample A Female 16.0
Sample B Female 14.7
Sample C Male 14.1
Sample D Male 11.7
Dorsal hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 22.3
Min nTPM: 11.3
Sample A Female 18.5
Sample B Female 13.4
Sample C Male 22.3
Sample D Male 11.3
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 15.2
Min nTPM: 13.2
Sample A Female 13.2
Sample B Female 14.1
Sample C Male 15.2
Sample D Male 13.3
Ventral hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 19.5
Min nTPM: 11.0
Sample A Female 15.1
Sample B Female 11.0
Sample C Male 19.5
Sample D Male 15.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 23.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.7
Samples: 4

Max nTPM: 26.0
Min nTPM: 21.9
Sample A Male 21.9
Sample B Male 21.9
Sample C Female 26.0
Sample D Female 25.1
Hippocampal formation
nTPM: 21.7
Samples: 4

Max nTPM: 25.0
Min nTPM: 16.7
Sample A Male 21.2
Sample B Male 16.7
Sample C Female 25.0
Sample D Female 24.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
71616832 Antisense, RP_050927_02_H03, Mouse strain C57BL/6J (56 days, male) 0.9

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