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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
B4GAT1 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
61.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
38.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
36.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
33.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
31.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
27.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
26.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
25.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
23.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
23.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
23.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
23.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
21.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
21.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
21.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
21.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
21.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
21.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
20.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
19.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
19.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
19.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
19.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
19.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
17.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
16.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
16.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
16.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
16.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
15.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
14.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
14.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
14.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
14.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
13.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
12.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
12.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
11.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
11.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
11.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
10.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
9.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
9.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
6.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
3.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
B4GAT1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
93.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
83.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
83.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
82.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
81.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
79.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
74.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
72.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
72.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
71.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
71.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
70.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
69.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
69.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
69.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
68.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
68.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
66.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
65.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
64.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
64.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
64.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
64.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
63.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
63.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
62.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
61.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
61.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
61.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
61.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
60.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
59.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
59.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
59.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
59.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
59.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
59.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
59.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
59.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
59.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
58.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
58.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
58.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
58.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
58.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
57.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
57.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
57.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
57.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
56.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
56.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
56.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
56.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
56.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
56.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
56.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
56.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
56.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
55.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
55.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
55.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
55.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
55.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
55.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
54.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
54.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
54.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
54.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
54.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
54.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
54.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
54.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
53.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
53.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
53.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
53.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
52.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
52.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
52.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
52.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
52.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
52.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
52.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
52.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
51.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
51.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
51.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
51.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
51.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
51.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
51.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
50.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
50.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
50.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
50.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
50.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
50.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
49.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
49.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
49.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
49.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
48.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
48.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
48.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
48.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
48.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
48.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
48.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
48.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
48.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
48.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
47.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
47.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
47.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
47.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
47.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
46.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
46.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
46.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
46.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
46.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
46.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
46.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
46.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
46.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
46.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
46.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
46.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
46.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
46.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
46.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
46.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
45.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
45.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
45.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
45.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
45.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
45.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
45.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
45.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
45.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
45.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
45.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
44.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
44.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
44.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
44.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
44.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
44.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
44.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
44.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
44.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
44.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
44.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
44.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
44.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
44.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
44.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
44.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
44.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
44.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
44.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
44.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
43.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
43.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
43.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
43.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
43.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
43.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
43.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
43.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
43.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
43.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
42.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
42.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
42.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
42.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
42.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
42.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
42.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
42.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
42.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
42.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
42.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
42.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
42.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
42.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
42.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
42.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
42.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
41.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
41.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
41.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
41.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
41.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
41.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
41.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
41.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
41.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
41.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
41.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
41.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
41.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
40.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
40.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
40.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
40.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
40.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
40.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
40.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
40.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
40.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
40.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
40.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
39.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
39.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
39.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
39.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
39.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
39.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
39.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
39.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
38.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
38.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
38.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
38.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
38.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
38.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
38.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
38.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
38.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
38.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
38.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
38.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
37.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
37.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
37.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
37.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
37.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
37.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
37.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
37.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
37.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
36.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
36.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
36.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
36.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
36.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
36.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
36.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
36.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
36.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
36.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
36.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
35.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
35.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
35.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
35.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
35.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
35.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
35.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
35.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
35.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
34.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
34.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
34.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
34.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
34.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
34.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
34.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
34.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
34.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
34.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
34.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
34.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
34.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
34.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
34.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
34.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
34.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
34.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
34.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
34.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
33.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
33.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
33.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
33.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
33.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
33.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
33.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
33.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
33.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
32.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
32.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
32.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
32.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
32.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
32.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
32.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
32.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
32.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
32.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
32.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
32.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
32.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
32.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
32.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
32.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
32.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
32.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
32.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
32.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
32.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
31.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
31.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
31.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
31.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
31.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
31.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
31.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
31.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
31.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
31.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
31.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
31.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
30.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
30.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
30.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
30.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
30.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
30.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
30.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
30.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
29.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
29.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
29.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
29.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
29.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
29.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
29.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
29.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
29.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
28.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
28.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
28.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
28.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
28.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
28.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
28.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
28.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
28.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
28.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
28.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
28.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
28.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
28.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
28.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
27.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
27.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
27.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
27.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
27.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
27.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
27.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
26.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
26.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
26.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
26.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
26.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
26.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
26.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
26.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
26.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
26.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
26.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
25.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
25.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
25.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
25.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
25.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
25.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
25.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
25.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
25.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
25.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
25.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
25.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
25.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
25.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
25.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
25.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
24.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
24.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
24.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
24.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
24.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
24.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
24.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
24.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
23.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
23.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
23.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
23.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
23.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
23.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
23.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
23.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
22.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
22.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
22.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
22.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
22.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
22.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
22.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
22.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
22.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
21.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
21.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
21.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
21.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
21.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
21.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
21.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
21.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
20.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
20.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
20.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
19.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
19.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
18.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
18.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
18.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
18.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
18.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
18.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
17.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
17.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
17.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
17.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
17.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
16.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
16.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
16.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
16.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
16.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
16.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
16.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
16.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
16.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
16.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
15.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
15.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
15.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
15.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
14.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
14.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
14.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
14.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
14.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
13.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
13.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
13.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
12.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
11.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
10.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
9.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
9.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
7.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
5.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
B4GAT1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
71.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
63.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
63.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
62.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
61.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
60.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
59.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
59.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
58.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
58.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
57.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
56.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
55.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
54.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
53.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
52.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
51.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
51.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
51.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
50.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
50.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
49.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
49.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
48.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
48.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
47.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
46.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
46.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
45.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
45.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
44.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
44.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
44.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
43.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
42.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
42.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
42.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
42.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
40.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
40.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
40.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
39.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
39.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
39.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
39.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
38.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
38.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
38.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
38.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
38.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
38.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
38.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
37.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
37.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
37.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
36.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
36.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
36.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
35.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
35.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
34.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
34.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
34.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
33.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
32.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
32.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
32.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
30.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
30.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
30.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
30.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
30.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
29.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
28.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
28.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
27.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
27.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
26.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
25.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
24.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
24.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
23.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
22.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
22.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
22.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
21.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
20.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
20.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
19.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
17.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
B4GAT1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
107.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
81.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
73.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
71.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
67.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
60.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
57.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
57.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
56.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
55.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
54.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
53.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
51.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
50.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
50.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
50.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
48.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
47.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
47.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
47.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
46.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
46.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
45.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
45.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
45.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
45.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
44.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
44.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
44.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
43.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
43.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
43.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
43.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
42.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
42.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
42.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
42.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
41.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
41.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
41.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
40.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
40.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
40.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
39.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
38.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
38.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
38.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
38.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
38.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
38.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
38.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
37.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
37.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
37.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
36.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
36.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
36.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
35.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
34.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
34.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
34.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
34.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
34.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
33.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
33.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
33.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
32.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
32.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
32.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
32.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
32.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
32.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
32.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
32.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
31.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
31.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
31.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
31.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
31.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
31.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
31.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
31.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
30.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
30.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
30.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
30.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
30.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
30.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
30.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
30.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
30.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
30.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
30.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
29.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
29.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
29.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
29.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
29.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
29.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
29.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
29.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
29.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
29.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
29.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
28.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
28.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
28.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
27.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
27.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
27.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
27.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
27.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
27.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
27.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
27.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
27.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
27.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
27.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
26.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
26.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
26.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
26.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
26.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
26.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
26.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
26.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
26.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
25.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
25.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
25.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
25.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
25.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
25.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
25.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
25.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
25.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
25.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
25.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
25.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
25.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
25.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
24.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
24.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
24.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
24.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
24.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
24.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
24.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
24.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
24.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
23.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
23.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
23.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
23.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
23.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
23.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
23.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
23.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
22.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
22.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
22.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
22.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
22.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
21.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
21.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
21.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
21.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
21.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
21.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
21.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
21.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
21.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
21.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
21.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
21.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
21.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
21.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
20.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
20.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
20.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
20.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
20.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
20.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
20.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
20.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
20.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
20.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
20.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
19.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
19.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
19.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
19.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
19.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
19.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
19.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
19.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
19.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
19.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
19.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
18.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
18.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
18.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
18.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
17.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
17.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
17.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
17.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
17.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
17.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
16.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
16.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
16.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
16.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
16.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
16.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
15.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
15.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
15.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
15.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
15.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
15.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
14.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
14.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
14.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
13.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
13.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
13.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
13.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
12.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
12.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
11.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
10.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
10.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
9.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
9.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
8.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
8.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
7.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
2.0
CPT0078930003
Tumor
1.1
CPT0006950001
Normal
0.9
CPT0025110003
Tumor
0.7
CPT0089460004
Tumor
0.6
CPT0065930003
Tumor
0.6
CPT0081880003
Tumor
0.6
CPT0026420001
Normal
0.6
CPT0066430001
Normal
0.6
CPT0010160003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0077110003
Tumor
0.4
CPT0065450001
Normal
0.4
CPT0000790001
Normal
0.4
CPT0079270003
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0001220008
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0001510001
Normal
0.3
CPT0007860003
Tumor
0.3
CPT0014350001
Normal
0.3
CPT0025880003
Tumor
0.3
CPT0092800003
Normal
0.3
CPT0089040001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0001500009
Tumor
0.3
CPT0078830003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0009000003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0066520001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0025580004
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0000870016
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0025060001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0014160003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0086950003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0078800003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0001350001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0014130001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0077500001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0088640003
Normal
-0.1
CPT0002270011
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0012900004
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0086030003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0026410003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0019160001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0012180003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0078510003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0012090003
Normal
-0.2
CPT0012570003
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0024670003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0001540009
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0079300001
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0086820003
Tumor
-0.3
CPT0023350003
Tumor
-0.3
CPT0069160003
Tumor
-0.3
CPT0018250001
Normal
-0.3
CPT0079380003
Tumor
-0.3
CPT0015810003
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0084590001
Normal
-0.3
CPT0088970003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0001180009
Tumor
-0.4
CPT0019130003
Tumor
-0.4
CPT0065430003
Tumor
-0.4
CPT0079510001
Normal
-0.4
CPT0000780007
Tumor
-0.4
CPT0078990003
Tumor
-0.4
CPT0011240003
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0066470004
Tumor
-0.5
CPT0088550004
Tumor
-0.5
CPT0001340003
Tumor
-0.5
CPT0079180003
Tumor
-0.5
CPT0079410003
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0086360003
Tumor
-0.6
CPT0086870003
Tumor
-0.6
CPT0078660003
Tumor
-0.7
CPT0017410003
Tumor
-0.8
CPT0009060003
Tumor
-0.9
CPT0088480003
Tumor
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.