Expression of B4GAT1 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

B4GAT1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 26.88

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

19.6

Number of samples

362

Samples

Sample	Description	TPM
TCGA-DD-A73E-01A	0 years, male, white, stage:Stage I, alive, 44 days	98.1
TCGA-DD-AADY-01A	0 years, female, asian, stage:Stage I, alive, 555 days	75.9
TCGA-DD-AACA-01A	0 years, male, asian, stage:Stage I, alive, 2301 days	74.0
TCGA-G3-AAV4-01A	0 years, female, white, stage:Stage I, dead, 27 days	72.0
TCGA-DD-A115-01A	0 years, male, white, stage:Stage IIIA, dead, 2542 days	63.4
TCGA-RC-A6M6-01A	0 years, male, white, stage:Stage II, alive, 9 days	53.8
TCGA-DD-A39W-01A	0 years, female, white, stage:Stage III, dead, 827 days	52.9
TCGA-XR-A8TE-01A	0 years, male, white, stage:Stage IIIA, alive, 925 days	52.8
TCGA-LG-A9QC-01A	0 years, male, white, stage:Stage I, alive, 425 days	52.3
TCGA-DD-AADC-01A	0 years, male, asian, stage:Stage I, dead, 425 days	46.7
TCGA-CC-A5UE-01A	0 years, male, asian, stage:Stage IIIB, dead, 272 days	46.0
TCGA-DD-AADP-01A	0 years, male, asian, stage:Stage I, alive, 458 days	45.9
TCGA-DD-A1EJ-01A	0 years, female, white, stage:Stage IIIC, dead, 1005 days	44.3
TCGA-CC-5260-01A	0 years, female, asian, stage:Stage IIIC, dead, 87 days	44.1
TCGA-G3-AAV6-01A	0 years, female, white, stage:Stage IIIA, dead, 65 days	42.3
TCGA-CC-5263-01A	0 years, male, asian, stage:Stage IIIA, dead, 129 days	41.8
TCGA-DD-AAW3-01A	0 years, male, asian, stage:Stage I, alive, 1633 days	41.7
TCGA-DD-A4NE-01A	0 years, female, white, stage:Stage IIIA, dead, 660 days	41.1
TCGA-G3-A7M9-01A	0 years, male, white, stage:Stage IIIB, dead, 56 days	41.0
TCGA-DD-AACU-01A	0 years, male, asian, stage:Stage I, alive, 1567 days	40.7
TCGA-DD-AADB-01A	0 years, male, asian, stage:Stage I, alive, 1242 days	40.4
TCGA-CC-A9FW-01A	0 years, male, asian, stage:Stage IIIA, alive, 248 days	40.3
TCGA-FV-A4ZQ-01A	0 years, male, white, stage:Stage I, alive, 12 days	40.2
TCGA-EP-A2KA-01A	0 years, female, white, stage:Stage IIIA, dead, 627 days	39.8
TCGA-CC-A5UD-01A	0 years, male, asian, stage:Stage IIIA, dead, 304 days	38.4
TCGA-DD-AAEE-01A	0 years, male, asian, stage:Stage I, alive, 810 days	37.9
TCGA-DD-AACH-01A	0 years, male, asian, stage:Stage II, dead, 195 days	37.9
TCGA-CC-A8HS-01A	0 years, male, asian, stage:Stage IIIC, dead, 300 days	37.8
TCGA-FV-A3R2-01A	0 years, male, white, stage:Stage I, dead, 194 days	37.2
TCGA-DD-AADD-01A	0 years, male, asian, stage:Stage I, alive, 1231 days	36.4
TCGA-DD-AACW-01A	0 years, male, asian, stage:Stage I, alive, 1424 days	36.4
TCGA-DD-A11B-01A	0 years, male, white, stage:Stage I, dead, 14 days	35.9
TCGA-EP-A12J-01A	0 years, male, black or african american, stage:Stage I, alive, 570 days	35.7
TCGA-ED-A8O5-01A	0 years, female, asian, stage:Stage IIIA, alive, 406 days	35.5
TCGA-DD-A1EH-01A	0 years, male, white, stage:Stage III, alive, 1495 days	35.3
TCGA-DD-AADG-01A	0 years, male, asian, stage:Stage IIIA, alive, 1145 days	35.2
TCGA-DD-A116-01A	0 years, male, asian, stage:Stage IIIA, dead, 1622 days	35.2
TCGA-KR-A7K8-01A	0 years, male, stage:Stage I, alive, 906 days	35.1
TCGA-BC-A10W-01A	0 years, male, asian, stage:'--, dead, 91 days	34.7
TCGA-DD-A1EB-01A	0 years, female, stage:Stage I, alive, 2017 days	34.0
TCGA-ZP-A9D2-01A	0 years, male, white, stage:'--, dead, 765 days	33.8
TCGA-CC-A3MB-01A	0 years, male, asian, stage:Stage IIIA, dead, 315 days	33.7
TCGA-CC-A7IE-01A	0 years, male, asian, stage:Stage IIIA, dead, 217 days	33.7
TCGA-CC-A7IH-01A	0 years, male, asian, stage:Stage IIIA, alive, 365 days	33.2
TCGA-DD-AAVS-01A	0 years, male, asian, stage:Stage I, alive, 1823 days	33.0
TCGA-CC-A5UC-01A	0 years, male, asian, stage:Stage IIIA, dead, 347 days	32.8
TCGA-CC-A7IL-01A	0 years, male, asian, stage:Stage IIIA, dead, 278 days	32.4
TCGA-DD-A3A8-01A	0 years, male, white, stage:Stage II, dead, 11 days	32.1
TCGA-G3-A7M6-01A	0 years, female, white, stage:Stage I, alive, 632 days	31.9
TCGA-2Y-A9GY-01A	0 years, female, white, stage:Stage II, dead, 757 days	31.7
TCGA-DD-AACS-01A	0 years, male, asian, stage:Stage I, alive, 1804 days	31.5
TCGA-DD-AADV-01A	0 years, male, asian, stage:Stage I, alive, 574 days	31.2
TCGA-DD-AACP-01A	0 years, male, asian, stage:Stage I, alive, 415 days	31.2
TCGA-DD-A73D-01A	0 years, female, white, stage:Stage II, alive, 693 days	31.1
TCGA-DD-AAW2-01A	0 years, male, asian, stage:Stage I, alive, 1855 days	30.9
TCGA-BC-A3KG-01A	0 years, female, white, stage:Stage II, alive, 680 days	30.6
TCGA-DD-A114-01A	0 years, male, black or african american, stage:Stage II, dead, 1149 days	30.1
TCGA-DD-AADL-01A	0 years, male, asian, stage:Stage I, alive, 636 days	30.1
TCGA-DD-AAD0-01A	0 years, female, asian, stage:Stage I, alive, 137 days	30.0
TCGA-RC-A7SK-01A	0 years, male, asian, stage:Stage I, alive, 472 days	29.7
TCGA-DD-AAD1-01A	0 years, female, asian, stage:Stage I, alive, 564 days	29.7
TCGA-DD-A4NF-01A	0 years, male, white, stage:Stage I, alive, 942 days	29.4
TCGA-DD-AAVW-01A	0 years, male, asian, stage:Stage I, alive, 2317 days	29.4
TCGA-UB-A7ME-01A	0 years, male, asian, stage:Stage I, alive, 486 days	29.1
TCGA-GJ-A9DB-01A	0 years, male, white, stage:Stage I, dead, 67 days	28.8
TCGA-CC-A7IF-01A	0 years, male, asian, stage:Stage IIIA, dead, 649 days	28.7
TCGA-2Y-A9HA-01A	0 years, male, white, stage:Stage II, dead, 36 days	28.1
TCGA-CC-5258-01A	0 years, male, asian, stage:Stage II, dead, 129 days	28.1
TCGA-LG-A6GG-01A	0 years, female, white, stage:Stage II, alive, 387 days	27.9
TCGA-2Y-A9GZ-01A	0 years, female, white, stage:Stage II, dead, 848 days	27.9
TCGA-FV-A3R3-01A	0 years, female, white, stage:Stage I, dead, 366 days	27.6
TCGA-DD-AADW-01A	0 years, male, asian, stage:Stage I, alive, 587 days	27.4
TCGA-CC-A7IJ-01A	0 years, male, asian, stage:Stage II, alive, 382 days	27.0
TCGA-ZP-A9CZ-01A	0 years, male, asian, stage:'--, alive, 706 days	27.0
TCGA-4R-AA8I-01A	0 years, male, white, stage:Stage II, dead, 262 days	26.9
TCGA-MI-A75I-01A	0 years, male, black or african american, stage:'--, alive, 630 days	26.8
TCGA-RC-A7SB-01A	0 years, male, asian, stage:Stage II, alive, 588 days	26.6
TCGA-UB-AA0U-01A	0 years, male, white, stage:Stage II, alive, 327 days	26.0
TCGA-DD-A11C-01A	0 years, male, white, stage:Stage I, alive, 662 days	26.0
TCGA-DD-AACB-01A	0 years, female, asian, stage:Stage I, alive, 2324 days	25.9
TCGA-HP-A5N0-01A	0 years, female, stage:'--, dead, 752 days	25.8
TCGA-DD-A4NS-01A	0 years, female, white, stage:Stage I, dead, 2456 days	25.6
TCGA-DD-AAW0-01A	0 years, male, asian, stage:Stage I, alive, 2015 days	25.2
TCGA-DD-AAVU-01A	0 years, male, asian, stage:Stage II, alive, 2202 days	25.2
TCGA-QA-A7B7-01A	0 years, male, black or african american, stage:Stage II, alive, 94 days	25.2
TCGA-2Y-A9GS-01A	0 years, male, white, stage:'--, dead, 724 days	24.9
TCGA-DD-A4NJ-01A	0 years, female, white, stage:Stage II, alive, 928 days	24.6
TCGA-2Y-A9H8-01A	0 years, female, white, stage:'--, dead, 633 days	24.6
TCGA-DD-A1EI-01A	0 years, male, asian, stage:Stage I, alive, 183 days	24.5
TCGA-EP-A2KB-01A	0 years, female, white, stage:Stage I, dead, 596 days	24.4
TCGA-G3-A6UC-01A	0 years, male, white, stage:Stage IIIB, alive, 671 days	24.4
TCGA-CC-A3MA-01A	0 years, male, asian, stage:Stage IIIA, dead, 303 days	24.0
TCGA-G3-A5SI-01A	0 years, male, asian, stage:Stage II, dead, 768 days	23.4
TCGA-ED-A66Y-01A	0 years, female, asian, stage:Stage IIIA, dead, 296 days	23.3
TCGA-DD-AACO-01A	0 years, male, asian, stage:Stage I, alive, 1876 days	23.2
TCGA-DD-AAD3-01A	0 years, male, asian, stage:Stage I, alive, 1295 days	23.2
TCGA-DD-A4NP-01A	0 years, male, white, stage:Stage I, alive, 3308 days	23.2
TCGA-DD-AAE6-01A	0 years, female, asian, stage:Stage I, alive, 141 days	23.2
TCGA-DD-AAC8-01A	0 years, male, asian, stage:Stage I, dead, 16 days	23.0
TCGA-G3-AAV3-01A	0 years, female, white, stage:Stage II, alive, 412 days	22.8
TCGA-5R-AA1C-01A	0 years, male, white, stage:Stage II, alive, 520 days	22.7
TCGA-DD-AAVP-01A	0 years, male, asian, stage:Stage I, alive, 2752 days	22.7
TCGA-DD-AADK-01A	0 years, female, asian, stage:Stage II, alive, 1049 days	22.6
TCGA-DD-A113-01A	0 years, female, white, stage:Stage II, alive, 2425 days	22.5
TCGA-2Y-A9H5-01A	0 years, female, white, stage:Stage I, dead, 555 days	22.2
TCGA-G3-AAV1-01A	0 years, male, asian, stage:Stage IIIC, dead, 359 days	22.1
TCGA-DD-A11D-01A	0 years, female, white, stage:Stage I, dead, 1560 days	22.1
TCGA-DD-A73F-01A	0 years, female, white, stage:Stage I, alive, 1085 days	22.0
TCGA-DD-AACE-01A	0 years, male, asian, stage:Stage I, alive, 2184 days	21.9
TCGA-3K-AAZ8-01A	0 years, male, black or african american, stage:Stage IIIB, alive, 396 days	21.8
TCGA-ZS-A9CF-01A	0 years, male, white, stage:Stage II, alive, 2412 days	21.8
TCGA-DD-AACL-01A	0 years, female, asian, stage:Stage I, dead, 107 days	21.7
TCGA-G3-A3CH-01A	0 years, male, asian, stage:Stage IIIA, alive, 780 days	21.6
TCGA-G3-A5SL-01A	0 years, male, white, stage:Stage II, alive, 621 days	21.4
TCGA-G3-AAV2-01A	0 years, male, white, stage:Stage I, alive, 372 days	21.4
TCGA-DD-AAVY-01A	0 years, male, asian, stage:Stage IIIA, alive, 1970 days	21.3
TCGA-DD-AAE9-01A	0 years, male, asian, stage:Stage I, alive, 722 days	21.2
TCGA-FV-A23B-01A	0 years, female, white, stage:Stage II, dead, 1852 days	21.2
TCGA-CC-A3M9-01A	0 years, male, asian, stage:Stage IIIA, dead, 300 days	21.2
TCGA-2Y-A9H7-01A	0 years, female, white, stage:Stage I, alive, 1168 days	21.0
TCGA-G3-A25Y-01A	0 years, female, asian, stage:Stage I, dead, 452 days	21.0
TCGA-ZS-A9CG-01A	0 years, male, white, stage:Stage II, alive, 341 days	20.8
TCGA-WX-AA44-01A	0 years, female, white, stage:Stage I, alive, 615 days	20.6
TCGA-RC-A6M4-01A	0 years, female, white, stage:Stage IIIA, alive, 22 days	20.4
TCGA-DD-A4NK-01A	0 years, female, white, stage:Stage IIIA, dead, 1210 days	20.3
TCGA-DD-A4NV-01A	0 years, male, white, stage:Stage IIIA, alive, 2398 days	20.3
TCGA-ED-A7XP-01A	0 years, female, asian, stage:Stage II, alive, 400 days	20.3
TCGA-NI-A8LF-01A	0 years, male, white, stage:Stage I, alive, 799 days	20.1
TCGA-FV-A3I1-01A	0 years, female, white, stage:Stage II, dead, 247 days	19.9
TCGA-DD-AACQ-01A	0 years, male, asian, stage:Stage II, dead, 432 days	19.9
TCGA-DD-A4NG-01A	0 years, male, white, stage:Stage IIIA, dead, 802 days	19.6
TCGA-ZP-A9D0-01A	0 years, female, black or african american, stage:'--, alive, 1091 days	19.6
TCGA-DD-AAEH-01A	0 years, male, asian, stage:Stage I, alive, 784 days	19.6
TCGA-BC-A217-01A	0 years, female, white, stage:Stage II, dead, 1397 days	19.5
TCGA-DD-AACX-01A	0 years, male, asian, stage:Stage II, alive, 170 days	19.5
TCGA-ED-A7PY-01A	0 years, female, asian, stage:Stage II, alive, 390 days	19.5
TCGA-UB-A7MB-01A	0 years, male, white, stage:Stage II, alive, 601 days	19.4
TCGA-CC-A1HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 101 days	19.3
TCGA-CC-5262-01A	0 years, male, asian, stage:Stage IIIC, dead, 103 days	19.3
TCGA-BC-A8YO-01A	0 years, female, white, stage:Stage IIIC, alive, 562 days	19.3
TCGA-DD-AAED-01A	0 years, male, asian, stage:Stage I, alive, 763 days	19.2
TCGA-G3-AAV7-01A	0 years, male, asian, stage:Stage II, alive, 361 days	19.0
TCGA-MI-A75H-01A	0 years, male, white, stage:'--, alive, 747 days	19.0
TCGA-2Y-A9H2-01A	0 years, female, white, stage:Stage I, alive, 1731 days	18.9
TCGA-DD-AAEG-01A	0 years, female, asian, stage:Stage I, alive, 719 days	18.9
TCGA-XR-A8TG-01A	0 years, male, white, stage:Stage I, alive, 898 days	18.8
TCGA-G3-AAV5-01A	0 years, male, white, stage:Stage II, alive, 354 days	18.6
TCGA-G3-A7M5-01A	0 years, male, asian, stage:Stage I, alive, 447 days	18.5
TCGA-PD-A5DF-01A	0 years, female, white, stage:Stage IIIB, dead, 639 days	18.4
TCGA-DD-A1EC-01A	0 years, female, white, stage:Stage I, alive, 602 days	18.3
TCGA-G3-A25T-01A	0 years, female, white, stage:Stage IIIA, alive, 1553 days	18.3
TCGA-BC-A5W4-01A	0 years, male, white, stage:Stage IIIA, dead, 547 days	18.2
TCGA-DD-A39Y-01A	0 years, male, asian, stage:Stage I, dead, 171 days	18.2
TCGA-5C-A9VH-01A	0 years, male, white, stage:Stage I, alive, 322 days	18.2
TCGA-BD-A2L6-01A	0 years, male, white, stage:'--, alive, 1363 days	18.1
TCGA-CC-A9FS-01A	0 years, male, asian, stage:Stage II, alive, 211 days	18.0
TCGA-FV-A2QR-01A	0 years, male, white, stage:Stage I, dead, 581 days	17.9
TCGA-ZP-A9CV-01A	0 years, male, white, stage:'--, dead, 1088 days	17.8
TCGA-BC-A10Z-01A	0 years, female, white, stage:Stage I, dead, 34 days	17.8
TCGA-BC-A10Y-01A	0 years, male, white, stage:'--, dead, 711 days	17.7
TCGA-DD-AAE1-01A	0 years, male, asian, stage:Stage I, alive, 552 days	17.7
TCGA-DD-AACN-01A	0 years, male, asian, stage:Stage I, alive, 1302 days	17.7
TCGA-CC-A8HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 140 days	17.6
TCGA-DD-A1EE-01A	0 years, male, white, stage:Stage IIIA, dead, 349 days	17.5
TCGA-BC-A216-01A	0 years, female, white, stage:Stage IIIA, alive, 1351 days	17.5
TCGA-G3-A25X-01A	0 years, male, asian, stage:Stage II, alive, 1779 days	17.5
TCGA-G3-A3CG-01A	0 years, male, white, stage:Stage I, alive, 673 days	17.4
TCGA-EP-A3RK-01A	0 years, male, white, stage:Stage IIIA, alive, 363 days	17.4
TCGA-DD-A3A5-01A	0 years, female, white, stage:Stage III, dead, 3125 days	17.3
TCGA-DD-A73B-01A	0 years, female, white, stage:Stage I, dead, 283 days	17.3
TCGA-ZP-A9CY-01A	0 years, female, white, stage:'--, alive, 782 days	17.2
TCGA-WJ-A86L-01A	0 years, female, white, stage:Stage I, alive, 345 days	17.2
TCGA-DD-A73C-01A	0 years, female, white, stage:Stage IIIA, alive, 701 days	17.2
TCGA-DD-AADJ-01A	0 years, female, asian, stage:Stage I, alive, 1066 days	17.1
TCGA-UB-A7MF-01A	0 years, male, white, stage:Stage IIIA, dead, 214 days	16.9
TCGA-T1-A6J8-01A	0 years, male, white, stage:'--, alive, 23 days	16.9
TCGA-DD-AACF-01A	0 years, male, asian, stage:Stage I, dead, 365 days	16.8
TCGA-2Y-A9HB-01A	0 years, male, stage:Stage I, alive, 260 days	16.7
TCGA-DD-A39Z-01A	0 years, female, stage:Stage II, dead, 601 days	16.7
TCGA-ED-A5KG-01A	0 years, female, asian, stage:Stage II, alive, 854 days	16.6
TCGA-DD-A4NN-01A	0 years, female, white, stage:Stage I, dead, 899 days	16.4
TCGA-UB-A7MA-01A	0 years, female, white, stage:Stage II, alive, 848 days	16.3
TCGA-EP-A2KC-01A	0 years, male, black or african american, stage:Stage I, dead, 19 days	16.2
TCGA-RG-A7D4-01A	0 years, male, black or african american, stage:Stage II, alive, 1098 days	16.1
TCGA-2Y-A9H9-01A	0 years, male, white, stage:Stage I, alive, 697 days	16.1
TCGA-DD-AAVX-01A	0 years, male, asian, stage:Stage II, alive, 1718 days	16.0
TCGA-ED-A97K-01A	0 years, male, asian, stage:Stage IIIA, alive, 6 days	16.0
TCGA-RC-A7S9-01A	0 years, female, asian, stage:Stage I, alive, 640 days	15.9
TCGA-ED-A7PZ-01A	0 years, male, asian, stage:Stage II, alive, 6 days	15.9
TCGA-DD-AACK-01A	0 years, male, asian, stage:Stage I, alive, 9 days	15.8
TCGA-ZP-A9D1-01A	0 years, female, white, stage:'--, alive, 21 days	15.7
TCGA-DD-AADU-01A	0 years, male, asian, stage:Stage II, alive, 554 days	15.6
TCGA-XR-A8TC-01A	0 years, female, white, stage:Stage I, alive, 1339 days	15.4
TCGA-BC-A69I-01A	0 years, male, white, stage:Stage I, alive, 387 days	15.4
TCGA-DD-AAEA-01A	0 years, male, asian, stage:Stage I, alive, 575 days	15.4
TCGA-DD-AAD5-01A	0 years, male, asian, stage:Stage I, alive, 1345 days	15.4
TCGA-BC-A10T-01A	0 years, male, white, stage:'--, dead, 837 days	15.3
TCGA-CC-5264-01A	0 years, male, asian, stage:Stage IIIA, dead, 102 days	15.3
TCGA-DD-A1EF-01A	0 years, female, white, stage:Stage I, dead, 394 days	15.2
TCGA-DD-A1EL-01A	0 years, male, black or african american, stage:Stage II, dead, 415 days	15.2
TCGA-DD-AADF-01A	0 years, female, asian, stage:Stage I, dead, 115 days	15.2
TCGA-DD-AAE2-01A	0 years, male, asian, stage:Stage I, alive, 638 days	15.2
TCGA-ED-A66X-01A	0 years, male, asian, stage:Stage IIIA, alive, 406 days	15.1
TCGA-ZP-A9D4-01A	0 years, female, white, stage:'--, alive, 395 days	15.1
TCGA-GJ-A6C0-01A	0 years, female, white, stage:Stage II, dead, 31 days	15.1
TCGA-DD-AAEK-01A	0 years, male, asian, stage:Stage II, alive, 1067 days	15.0
TCGA-DD-A4NQ-01A	0 years, male, white, stage:Stage II, dead, 373 days	15.0
TCGA-BC-A10U-01A	0 years, male, white, stage:'--, dead, 837 days	14.9
TCGA-DD-AAE0-01A	0 years, female, asian, stage:Stage IIIA, alive, 555 days	14.8
TCGA-ED-A82E-01A	0 years, female, asian, stage:Stage IIIA, alive, 408 days	14.7
TCGA-G3-A3CK-01A	0 years, male, asian, stage:Stage I, alive, 585 days	14.7
TCGA-DD-A1EA-01A	0 years, male, asian, stage:Stage II, alive, 2415 days	14.6
TCGA-UB-AA0V-01A	0 years, female, white, stage:Stage I, alive, 314 days	14.6
TCGA-ED-A459-01A	0 years, male, asian, stage:Stage II, alive, 910 days	14.5
TCGA-G3-A7M8-01A	0 years, male, asian, stage:Stage I, alive, 430 days	14.4
TCGA-DD-AADR-01A	0 years, male, asian, stage:Stage I, alive, 2028 days	14.4
TCGA-KR-A7K0-01A	0 years, male, white, stage:Stage I, dead, 65 days	14.3
TCGA-DD-AAE3-01A	0 years, male, asian, stage:Stage I, alive, 566 days	14.3
TCGA-CC-A8HU-01A	0 years, female, asian, stage:Stage IIIA, dead, 344 days	14.2
TCGA-CC-5261-01A	0 years, male, asian, stage:Stage II, dead, 97 days	14.2
TCGA-DD-A3A2-01A	0 years, female, white, stage:Stage I, dead, 2131 days	14.1
TCGA-DD-A4NH-01A	0 years, female, white, stage:Stage IIIB, alive, 917 days	14.1
TCGA-WX-AA46-01A	0 years, male, white, stage:Stage II, alive, 756 days	14.0
TCGA-DD-AADI-01A	0 years, female, asian, stage:Stage I, alive, 1085 days	14.0
TCGA-MI-A75G-01A	0 years, male, white, stage:Stage II, alive, 698 days	14.0
TCGA-2Y-A9GV-01A	0 years, female, white, stage:Stage I, dead, 2532 days	13.9
TCGA-DD-AAVQ-01A	0 years, male, asian, stage:Stage I, alive, 2728 days	13.8
TCGA-ED-A4XI-01A	0 years, male, asian, stage:Stage II, alive, 819 days	13.8
TCGA-ZS-A9CE-01A	0 years, female, white, stage:Stage II, alive, 1241 days	13.8
TCGA-O8-A75V-01A	0 years, male, stage:Stage I, alive, 538 days	13.7
TCGA-XR-A8TD-01A	0 years, female, white, stage:Stage IIIB, alive, 1030 days	13.7
TCGA-ED-A7XO-01A	0 years, male, asian, stage:Stage IIIA, alive, 427 days	13.6
TCGA-CC-A3MC-01A	0 years, male, asian, stage:Stage IIIA, alive, 363 days	13.6
TCGA-DD-AAW1-01A	0 years, male, asian, stage:Stage IIIA, alive, 1989 days	13.5
TCGA-DD-AAD2-01A	0 years, male, asian, stage:Stage I, alive, 658 days	13.5
TCGA-EP-A26S-01A	0 years, male, white, stage:Stage I, alive, 608 days	13.5
TCGA-GJ-A3OU-01A	0 years, male, white, stage:Stage I, alive, 879 days	13.4
TCGA-DD-AACD-01A	0 years, male, asian, stage:Stage I, dead, 381 days	13.4
TCGA-DD-AAVZ-01A	0 years, male, asian, stage:Stage I, alive, 1900 days	13.4
TCGA-2Y-A9GT-01A	0 years, male, white, stage:Stage I, dead, 1624 days	13.3
TCGA-G3-A25S-01A	0 years, male, white, stage:Stage I, dead, 416 days	13.2
TCGA-CC-A123-01A	0 years, female, asian, stage:Stage IIIA, alive, 219 days	13.1
TCGA-UB-A7MC-01A	0 years, male, white, stage:Stage IIIA, alive, 500 days	13.1
TCGA-DD-AAEB-01A	0 years, male, asian, stage:Stage I, alive, 478 days	13.0
TCGA-DD-A4NI-01A	0 years, male, white, stage:Stage II, alive, 816 days	13.0
TCGA-BC-A3KF-01A	0 years, female, white, stage:Stage I, alive, 8 days	12.9
TCGA-DD-A4NA-01A	0 years, female, white, stage:Stage IIIC, alive, 1008 days	12.9
TCGA-ED-A627-01A	0 years, male, white, stage:Stage I, alive, 423 days	12.8
TCGA-DD-A1EK-01A	0 years, female, white, stage:Stage IVB, dead, 558 days	12.7
TCGA-2Y-A9H4-01A	0 years, male, black or african american, stage:Stage I, alive, 1452 days	12.7
TCGA-CC-A7IK-01A	0 years, male, asian, stage:Stage IIIA, dead, 262 days	12.7
TCGA-G3-AAV0-01A	0 years, male, asian, stage:Stage I, alive, 476 days	12.6
TCGA-2Y-A9H0-01A	0 years, male, white, stage:Stage IIIA, alive, 3675 days	12.6
TCGA-MI-A75E-01A	0 years, male, white, stage:Stage IIIC, alive, 507 days	12.5
TCGA-FV-A3I0-01A	0 years, female, white, stage:Stage II, alive, 848 days	12.4
TCGA-RC-A7SF-01A	0 years, male, asian, stage:Stage I, alive, 579 days	12.4
TCGA-DD-A3A4-01A	0 years, male, white, stage:Stage IIIA, dead, 612 days	12.4
TCGA-ED-A8O6-01A	0 years, female, asian, stage:Stage IIIA, dead, 56 days	12.3
TCGA-K7-A5RF-01A	0 years, male, white, stage:Stage I, alive, 631 days	12.3
TCGA-BD-A3EP-01A	0 years, female, black or african american, stage:Stage I, alive, 409 days	12.2
TCGA-FV-A496-01A	0 years, female, white, stage:Stage I, alive, 10 days	12.1
TCGA-DD-A39X-01A	0 years, female, white, stage:Stage I, dead, 1694 days	12.0
TCGA-2Y-A9H6-01A	0 years, female, white, stage:Stage I, alive, 357 days	12.0
TCGA-K7-A6G5-01A	0 years, male, white, stage:Stage I, alive, 512 days	11.9
TCGA-XR-A8TF-01A	0 years, male, white, stage:Stage I, dead, 693 days	11.9
TCGA-DD-AAVV-01A	0 years, male, asian, stage:Stage II, alive, 2455 days	11.8
TCGA-BC-A10X-01A	0 years, female, white, stage:Stage IIIA, dead, 770 days	11.8
TCGA-DD-AACJ-01A	0 years, male, asian, stage:Stage II, alive, 2102 days	11.7
TCGA-CC-A7II-01A	0 years, male, asian, stage:Stage IIIA, alive, 399 days	11.7
TCGA-DD-A119-01A	0 years, male, asian, stage:Stage IV, dead, 223 days	11.7
TCGA-BC-A10Q-01A	0 years, female, white, stage:'--, dead, 1135 days	11.6
TCGA-G3-AAUZ-01A	0 years, male, stage:Stage I, alive, 480 days	11.6
TCGA-G3-A3CJ-01A	0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	11.6
TCGA-DD-A73A-01A	0 years, male, white, stage:Stage I, alive, 728 days	11.5
TCGA-2Y-A9H3-01A	0 years, male, white, stage:Stage II, alive, 1516 days	11.3
TCGA-DD-A4NO-01A	0 years, male, white, stage:Stage I, alive, 2245 days	11.3
TCGA-CC-A7IG-01A	0 years, male, asian, stage:Stage II, dead, 299 days	11.3
TCGA-5R-AAAM-01A	0 years, female, white, stage:Stage II, dead, 46 days	11.2
TCGA-DD-AACZ-01A	0 years, female, asian, stage:Stage I, dead, 171 days	11.1
TCGA-K7-A5RG-01A	0 years, male, black or african american, stage:Stage I, alive, 519 days	11.1
TCGA-G3-A25Z-01A	0 years, male, asian, stage:Stage I, alive, 655 days	10.8
TCGA-G3-A7M7-01A	0 years, male, white, stage:Stage I, alive, 361 days	10.7
TCGA-DD-A3A6-01A	0 years, female, white, stage:Stage II, dead, 3258 days	10.7
TCGA-BC-A69H-01A	0 years, male, white, stage:Stage II, alive, 444 days	10.7
TCGA-2Y-A9GU-01A	0 years, female, white, stage:Stage I, alive, 1939 days	10.6
TCGA-BW-A5NO-01A	0 years, male, black or african american, stage:Stage IIIA, alive, 20 days	10.6
TCGA-DD-AADS-01A	0 years, male, asian, stage:Stage I, alive, 474 days	10.6
TCGA-DD-AADQ-01A	0 years, male, asian, stage:Stage II, alive, 436 days	10.6
TCGA-UB-A7MD-01A	0 years, male, black or african american, stage:Stage I, dead, 52 days	10.5
TCGA-DD-AACV-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	10.5
TCGA-MR-A520-01A	0 years, male, white, stage:Stage I, alive, 229 days	10.5
TCGA-DD-AACY-01A	0 years, male, asian, stage:Stage I, alive, 1450 days	10.5
TCGA-DD-A4NB-01A	0 years, male, white, stage:Stage I, alive, 989 days	10.4
TCGA-2Y-A9GX-01A	0 years, male, white, stage:Stage I, alive, 2442 days	10.4
TCGA-DD-AAD8-01A	0 years, female, asian, stage:Stage I, alive, 1219 days	10.2
TCGA-DD-A3A3-01A	0 years, male, asian, stage:Stage I, dead, 535 days	10.2
TCGA-BC-A10S-01A	0 years, male, white, stage:'--, dead, 1423 days	10.2
TCGA-G3-A25U-01A	0 years, female, asian, stage:Stage I, alive, 1636 days	10.1
TCGA-KR-A7K7-01A	0 years, female, white, stage:Stage II, alive, 951 days	10.1
TCGA-WQ-A9G7-01A	0 years, female, white, stage:'--, alive, 30 days	9.9
TCGA-MI-A75C-01A	0 years, male, white, stage:Stage I, alive, 291 days	9.9
TCGA-FV-A495-01A	0 years, female, white, stage:Stage II, alive, 1 days	9.8
TCGA-DD-AACI-01A	0 years, male, asian, stage:Stage II, alive, 1618 days	9.8
TCGA-FV-A2QQ-01A	0 years, male, white, stage:Stage I, alive, 729 days	9.7
TCGA-DD-AADN-01A	0 years, male, asian, stage:Stage I, alive, 898 days	9.7
TCGA-BC-A112-01A	0 years, male, white, stage:'--, dead, 153 days	9.7
TCGA-DD-A1ED-01A	0 years, male, white, stage:Stage I, alive, 2301 days	9.6
TCGA-DD-AA3A-01A	0 years, female, white, stage:Stage I, dead, 410 days	9.5
TCGA-5R-AA1D-01A	0 years, female, white, stage:Stage IIIA, alive, 449 days	9.5
TCGA-2Y-A9GW-01A	0 years, male, white, stage:Stage I, dead, 1271 days	9.4
TCGA-RC-A7SH-01A	0 years, male, asian, stage:Stage II, alive, 468 days	9.4
TCGA-DD-A4NR-01A	0 years, female, white, stage:Stage I, dead, 9 days	9.4
TCGA-DD-AADM-01A	0 years, male, asian, stage:Stage II, dead, 12 days	9.2
TCGA-DD-AACG-01A	0 years, male, asian, stage:Stage II, dead, 469 days	9.2
TCGA-DD-AAE4-01A	0 years, female, asian, stage:Stage I, alive, 608 days	9.1
TCGA-DD-A3A7-01A	0 years, male, stage:Stage IIIB, dead, 419 days	9.1
TCGA-DD-AAD6-01A	0 years, male, asian, stage:Stage IIIA, alive, 672 days	9.1
TCGA-DD-AACT-01A	0 years, female, asian, stage:Stage I, alive, 1562 days	9.1
TCGA-DD-A4NL-01A	0 years, male, white, stage:Stage I, alive, 1711 days	9.0
TCGA-K7-AAU7-01A	0 years, male, white, stage:Stage II, alive, 359 days	9.0
TCGA-RC-A6M5-01A	0 years, female, white, stage:Stage IVA, alive, 15 days	8.9
TCGA-DD-A118-01A	0 years, female, white, stage:Stage II, alive, 3437 days	8.8
TCGA-DD-A3A1-01A	0 years, male, stage:Stage IIIA, dead, 233 days	8.8
TCGA-ES-A2HS-01A	0 years, male, white, stage:Stage I, dead, 688 days	8.8
TCGA-DD-A1EG-01A	0 years, male, white, stage:Stage I, dead, 1372 days	8.7
TCGA-DD-AACC-01A	0 years, male, asian, stage:Stage I, dead, 1685 days	8.6
TCGA-NI-A4U2-01A	0 years, male, white, stage:Stage IIIA, dead, 1791 days	8.6
TCGA-G3-A3CI-01A	0 years, male, white, stage:Stage I, alive, 180 days	8.6
TCGA-DD-A39V-01A	0 years, male, white, stage:Stage II, dead, 643 days	8.6
TCGA-BC-A10R-01A	0 years, female, white, stage:'--, dead, 308 days	8.5
TCGA-LG-A9QD-01A	0 years, male, white, stage:Stage IIIA, alive, 366 days	8.4
TCGA-DD-A4ND-01A	0 years, female, white, stage:Stage I, alive, 2746 days	8.4
TCGA-WQ-AB4B-01A	0 years, male, white, stage:Stage II, alive, 395 days	8.3
TCGA-KR-A7K2-01A	0 years, male, white, stage:Stage I, alive, 829 days	8.1
TCGA-ZS-A9CD-01A	0 years, male, white, stage:Stage II, dead, 1386 days	8.0
TCGA-HP-A5MZ-01A	0 years, male, stage:Stage I, dead, 91 days	8.0
TCGA-G3-A25V-01A	0 years, male, white, stage:Stage I, alive, 860 days	7.9
TCGA-DD-AAE7-01A	0 years, male, asian, stage:Stage I, alive, 644 days	7.9
TCGA-YA-A8S7-01A	0 years, male, white, stage:Stage IIIA, dead, 412 days	7.8
TCGA-G3-A5SJ-01A	0 years, male, white, stage:Stage I, alive, 698 days	7.7
TCGA-5C-A9VG-01A	0 years, male, white, stage:Stage II, alive, 328 days	7.5
TCGA-BD-A3ER-01A	0 years, male, white, stage:Stage II, alive, 1115 days	7.4
TCGA-DD-AADO-01A	0 years, male, asian, stage:Stage I, alive, 453 days	7.1
TCGA-5C-AAPD-01A	0 years, male, asian, stage:Stage II, alive, 20 days	7.0
TCGA-DD-AADA-01A	0 years, female, asian, stage:Stage I, alive, 1233 days	6.9
TCGA-G3-A5SM-01A	0 years, male, white, stage:Stage II, alive, 520 days	6.9
TCGA-MR-A8JO-01A	0 years, male, white, stage:Stage I, alive, 330 days	6.8
TCGA-2Y-A9H1-01A	0 years, male, white, stage:Stage I, dead, 1229 days	6.8
TCGA-EP-A3JL-01A	0 years, male, white, stage:Stage I, alive, 303 days	6.8
TCGA-CC-A8HV-01A	0 years, female, asian, stage:Stage II, dead, 279 days	6.7
TCGA-DD-A3A9-01A	0 years, female, white, stage:Stage IVB, dead, 931 days	6.7
TCGA-FV-A4ZP-01A	0 years, male, white, stage:Stage IIIA, dead, 2486 days	6.6
TCGA-DD-AAEI-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	6.5
TCGA-G3-A5SK-01A	0 years, male, white, stage:Stage I, alive, 744 days	6.4
TCGA-DD-AAVR-01A	0 years, male, asian, stage:Stage I, alive, 2513 days	6.1
TCGA-ED-A7PX-01A	0 years, female, asian, stage:Stage II, alive, 6 days	6.0
TCGA-BC-A110-01A	0 years, female, black or african american, stage:'--, dead, 2116 days	6.0
TCGA-ES-A2HT-01A	0 years, male, black or african american, stage:Stage I, dead, 438 days	6.0
TCGA-CC-5259-01A	0 years, female, asian, stage:Stage IIIC, alive, 250 days	5.8
TCGA-DD-A73G-01A	0 years, female, white, stage:Stage I, alive, 3478 days	5.5
TCGA-DD-AAC9-01A	0 years, male, asian, stage:Stage I, alive, 347 days	4.7
TCGA-WX-AA47-01A	0 years, female, white, stage:Stage IIIA, dead, 556 days	4.2
Show allShow less

LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
1027	Tumor	1.1
877	Tumor	1.1
227	Tumor	1.1
661	Tumor	1.1
527	Tumor	1.0
367	Tumor	1.0
351	Tumor	0.9
413	Tumor	0.9
815	Tumor	0.9
951	Tumor	0.9
743	Tumor	0.8
387	Tumor	0.8
411	Tumor	0.8
477	Tumor	0.8
471	Tumor	0.7
685	Tumor	0.7
391	Tumor	0.7
385	Tumor	0.7
665	Tumor	0.6
671	Tumor	0.6
331	Tumor	0.6
1025	Tumor	0.6
277	Tumor	0.5
814	Normal	0.5
1015	Tumor	0.5
937	Tumor	0.5
813	Tumor	0.5
261	Tumor	0.5
131	Tumor	0.5
535	Tumor	0.4
923	Tumor	0.4
865	Tumor	0.4
443	Tumor	0.4
697	Tumor	0.4
983	Tumor	0.4
515	Tumor	0.4
363	Tumor	0.4
1021	Tumor	0.4
727	Tumor	0.4
715	Tumor	0.4
635	Tumor	0.4
463	Tumor	0.4
357	Tumor	0.4
915	Tumor	0.3
493	Tumor	0.3
641	Tumor	0.3
553	Tumor	0.3
755	Tumor	0.3
127	Tumor	0.3
523	Tumor	0.3
978	Normal	0.3
1041	Tumor	0.3
925	Tumor	0.3
483	Tumor	0.3
482	Normal	0.3
283	Tumor	0.3
285	Tumor	0.3
313	Tumor	0.2
1043	Tumor	0.2
534	Normal	0.2
343	Tumor	0.2
393	Tumor	0.2
455	Tumor	0.2
617	Tumor	0.2
484	Normal	0.2
171	Tumor	0.2
412	Normal	0.2
494	Normal	0.2
445	Tumor	0.2
713	Tumor	0.2
863	Tumor	0.2
967	Tumor	0.2
823	Tumor	0.2
728	Normal	0.2
867	Tumor	0.2
1014	Normal	0.2
664	Normal	0.2
517	Tumor	0.2
737	Tumor	0.1
777	Tumor	0.1
526	Normal	0.1
525	Tumor	0.1
557	Tumor	0.1
545	Tumor	0.1
221	Tumor	0.1
271	Tumor	0.1
554	Normal	0.1
981	Tumor	0.1
257	Tumor	0.1
481	Tumor	0.1
366	Normal	0.1
984	Normal	0.1
1013	Tumor	0.1
297	Tumor	0.1
232	Normal	0.1
648	Normal	0.1
1032	Normal	0.1
354	Normal	0.0
465	Tumor	0.0
395	Tumor	0.0
982	Normal	0.0
474	Normal	0.0
957	Tumor	0.0
452	Normal	0.0
433	Tumor	0.0
286	Normal	0.0
187	Tumor	0.0
195	Tumor	0.0
428	Normal	0.0
355	Tumor	0.0
462	Normal	0.0
196	Normal	0.0
223	Tumor	0.0
666	Normal	0.0
388	Normal	0.0
414	Normal	0.0
368	Normal	0.0
738	Normal	0.0
137	Tumor	0.0
341	Tumor	0.0
358	Normal	0.0
424	Normal	0.0
514	Normal	0.0
228	Normal	0.0
284	Normal	0.0
362	Normal	0.0
528	Normal	0.0
686	Normal	0.0
213	Tumor	0.0
558	Normal	0.0
422	Normal	0.0
568	Normal	0.0
222	Normal	0.0
185	Tumor	0.0
944	Normal	0.0
533	Tumor	0.0
136	Normal	0.0
365	Tumor	-0.1
212	Normal	-0.1
186	Normal	-0.1
745	Tumor	-0.1
113	Tumor	-0.1
314	Normal	-0.1
361	Tumor	-0.1
431	Tumor	-0.1
546	Normal	-0.1
278	Normal	-0.1
224	Normal	-0.1
516	Normal	-0.1
741	Tumor	-0.1
564	Normal	-0.1
464	Normal	-0.1
447	Tumor	-0.1
518	Normal	-0.1
742	Normal	-0.1
128	Normal	-0.1
352	Normal	-0.1
537	Tumor	-0.1
883	Tumor	-0.1
672	Normal	-0.1
427	Tumor	-0.1
663	Tumor	-0.1
426	Normal	-0.1
714	Normal	-0.1
446	Normal	-0.1
882	Normal	-0.1
572	Normal	-0.1
356	Normal	-0.1
964	Normal	-0.1
914	Normal	-0.1
497	Tumor	-0.1
312	Normal	-0.1
873	Tumor	-0.1
375	Tumor	-0.1
977	Tumor	-0.1
376	Normal	-0.1
342	Normal	-0.1
1016	Normal	-0.1
328	Normal	-0.1
448	Normal	-0.1
384	Normal	-0.1
142	Normal	-0.1
922	Normal	-0.1
662	Normal	-0.1
472	Normal	-0.1
954	Normal	-0.1
456	Normal	-0.1
538	Normal	-0.1
383	Tumor	-0.1
864	Normal	-0.1
332	Normal	-0.1
938	Normal	-0.1
488	Normal	-0.1
416	Normal	-0.1
921	Tumor	-0.1
421	Tumor	-0.1
716	Normal	-0.1
868	Normal	-0.2
722	Normal	-0.2
353	Tumor	-0.2
956	Normal	-0.2
172	Normal	-0.2
268	Normal	-0.2
267	Tumor	-0.2
138	Normal	-0.2
364	Normal	-0.2
272	Normal	-0.2
148	Normal	-0.2
425	Tumor	-0.2
1042	Normal	-0.2
917	Tumor	-0.2
466	Normal	-0.2
344	Normal	-0.2
618	Normal	-0.2
616	Normal	-0.2
958	Normal	-0.2
878	Normal	-0.2
943	Tumor	-0.2
1022	Normal	-0.2
498	Normal	-0.2
217	Tumor	-0.2
615	Tumor	-0.2
214	Normal	-0.2
311	Tumor	-0.2
723	Tumor	-0.2
432	Normal	-0.2
744	Normal	-0.2
698	Normal	-0.2
192	Normal	-0.2
874	Normal	-0.2
124	Normal	-0.2
231	Tumor	-0.2
976	Normal	-0.2
492	Normal	-0.2
817	Tumor	-0.2
628	Normal	-0.2
642	Normal	-0.2
866	Normal	-0.2
467	Tumor	-0.2
952	Normal	-0.2
1026	Normal	-0.2
1044	Normal	-0.2
1028	Normal	-0.2
926	Normal	-0.2
524	Normal	-0.2
468	Normal	-0.2
135	Tumor	-0.2
862	Normal	-0.2
916	Normal	-0.2
912	Normal	-0.2
436	Normal	-0.2
636	Normal	-0.2
513	Tumor	-0.2
218	Normal	-0.2
478	Normal	-0.2
123	Tumor	-0.2
968	Normal	-0.2
861	Tumor	-0.3
162	Normal	-0.3
563	Tumor	-0.3
423	Tumor	-0.3
918	Normal	-0.3
721	Tumor	-0.3
778	Normal	-0.3
696	Normal	-0.3
434	Normal	-0.3
146	Normal	-0.3
824	Normal	-0.3
451	Tumor	-0.3
112	Tumor	-0.3
1046	Normal	-0.3
487	Tumor	-0.3
132	Normal	-0.3
262	Normal	-0.3
147	Tumor	-0.3
258	Normal	-0.3
111	Normal	-0.3
746	Normal	-0.3
913	Tumor	-0.3
955	Tumor	-0.3
491	Tumor	-0.3
881	Tumor	-0.3
435	Tumor	-0.3
911	Tumor	-0.3
161	Tumor	-0.3
298	Normal	-0.3
924	Normal	-0.4
647	Tumor	-0.4
695	Tumor	-0.4
963	Tumor	-0.4
966	Normal	-0.4
1031	Tumor	-0.4
756	Normal	-0.4
191	Tumor	-0.4
1045	Tumor	-0.4
786	Normal	-0.4
574	Normal	-0.4
852	Normal	-0.4
965	Tumor	-0.4
125	Tumor	-0.4
816	Normal	-0.4
785	Tumor	-0.4
884	Normal	-0.4
858	Normal	-0.4
724	Normal	-0.4
114	Normal	-0.4
571	Tumor	-0.4
126	Normal	-0.4
818	Normal	-0.4
396	Normal	-0.5
327	Tumor	-0.5
444	Normal	-0.5
536	Normal	-0.5
188	Normal	-0.5
394	Normal	-0.5
461	Tumor	-0.5
857	Tumor	-0.5
573	Tumor	-0.5
627	Tumor	-0.5
473	Tumor	-0.5
392	Normal	-0.5
851	Tumor	-0.5
141	Tumor	-0.5
386	Normal	-0.6
415	Tumor	-0.7
975	Tumor	-0.7
211	Tumor	-0.7
145	Tumor	-0.7
953	Tumor	-0.9
567	Tumor	-0.9
Show allShow less

LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA015484
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS