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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNAPC5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
103.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
97.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
88.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
73.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
69.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
67.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
62.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
59.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
57.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
54.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
53.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
52.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
48.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
46.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
46.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
44.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
44.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
41.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
40.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
40.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
36.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
35.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
35.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
34.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
34.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
33.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
31.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
31.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
30.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
29.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
28.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
27.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
26.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
26.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
26.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
26.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
25.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
25.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
24.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
24.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
24.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
24.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
23.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
22.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
21.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
21.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
21.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
20.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
20.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
19.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
19.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
19.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
18.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
17.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
17.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
16.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
16.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
15.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
10.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNAPC5 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
41.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
36.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
36.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
34.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
32.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
32.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
31.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
30.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
30.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
28.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
28.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
28.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
26.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
26.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
25.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
25.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
25.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
25.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
25.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
24.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
24.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
24.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
24.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
24.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
24.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
24.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
23.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
23.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
23.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
23.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
23.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
23.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
23.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
23.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
22.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
22.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
22.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
22.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
22.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
22.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
22.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
22.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
22.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
22.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
22.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
21.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
21.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
21.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
21.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
21.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
21.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
21.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
21.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
21.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
21.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
21.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
21.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
21.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
21.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
21.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
21.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
21.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
21.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
21.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
21.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
21.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
21.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
21.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
20.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
20.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
20.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
20.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
20.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
20.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
20.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
20.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
20.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
20.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
20.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
20.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
20.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
20.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
20.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
20.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
20.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
20.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
20.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
20.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
20.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
19.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
19.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
19.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
19.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
19.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
19.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
19.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
19.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
19.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
19.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
19.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
19.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
19.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
19.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
19.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
19.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
19.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
19.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
19.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
19.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
19.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
19.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
19.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
19.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
19.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
19.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
19.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
19.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
19.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
19.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
19.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
18.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
18.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
18.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
18.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
18.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
18.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
18.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
18.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
18.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
18.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
18.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
18.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
18.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
18.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
18.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
18.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
18.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
18.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
18.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
18.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
18.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
18.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
18.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
18.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
18.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
18.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
18.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
17.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
17.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
17.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
17.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
17.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
17.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
17.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
17.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
17.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
17.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
17.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
17.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
17.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
17.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
17.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
17.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
17.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
17.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
17.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
17.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.4
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
17.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
17.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
17.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
17.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
17.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
17.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
17.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
17.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
17.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
17.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
17.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
17.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
17.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
17.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
17.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
17.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
17.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
17.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
17.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
17.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
16.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
16.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
16.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
16.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
16.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
16.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
16.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
16.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
16.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
16.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
16.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
16.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
16.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
16.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
16.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
16.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
16.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
16.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
16.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
16.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
16.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
16.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
16.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
16.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
16.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
16.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
16.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
16.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
16.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
16.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
16.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
16.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
16.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
16.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
16.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
16.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
16.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
16.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
16.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
16.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
16.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
16.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
16.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
16.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
16.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
16.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
15.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
15.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
15.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
15.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
15.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
15.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
15.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
15.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
15.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
15.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
15.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
15.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
15.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
15.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
15.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
15.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
15.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
15.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
15.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
15.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
15.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
15.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
15.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
15.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
15.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
15.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
14.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
14.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
14.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
14.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
14.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
14.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
14.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
14.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
14.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
14.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
14.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
14.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
14.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
14.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
14.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
14.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
14.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
14.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
14.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
14.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
14.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
14.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
14.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
14.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
14.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
14.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
14.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
14.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
14.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
14.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
14.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
14.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
14.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
13.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
13.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
13.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
13.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
13.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
13.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
13.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
13.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
13.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
13.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
13.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
13.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
13.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
13.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
13.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
12.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
12.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
12.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
12.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
12.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
12.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
12.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
12.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
12.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
12.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
12.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
12.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
12.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
12.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
11.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
11.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
11.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
11.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
11.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
11.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
11.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
11.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
11.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
11.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
11.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
11.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
11.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
10.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
10.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
10.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
10.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
10.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
10.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
9.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
9.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
9.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
8.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
8.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
7.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNAPC5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
40.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
34.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
33.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
32.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
30.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
30.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
29.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
29.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
28.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
26.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
26.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
26.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
25.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
25.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
25.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
25.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
25.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
25.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
25.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
25.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
24.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
24.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
23.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
23.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
23.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
22.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
22.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
22.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
22.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
22.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
21.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
21.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
20.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
20.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
20.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
20.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
20.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
19.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
19.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
19.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
19.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
19.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
19.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
19.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
19.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
18.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
18.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
18.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
18.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
18.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
17.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
17.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
17.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
17.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
17.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
17.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
17.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
17.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
16.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
16.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
16.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
15.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
14.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
14.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
14.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
12.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
12.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
12.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
11.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
11.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
10.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SNAPC5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
110.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
65.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
63.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
59.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
59.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
58.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
57.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
56.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
56.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
53.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
51.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
48.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
48.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
47.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
46.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
45.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
43.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
43.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
42.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
40.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
39.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
39.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
39.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
39.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
37.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
37.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
37.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
36.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
36.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
35.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
35.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
34.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
34.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
33.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
33.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
33.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
32.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
32.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
32.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
32.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
32.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
32.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
31.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
31.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
31.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
31.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
30.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
30.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
30.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
30.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
30.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
29.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
29.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
29.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
29.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
29.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
29.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
28.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
28.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
28.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
28.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
27.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
27.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
27.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
27.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
27.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
26.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
26.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
26.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
26.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
26.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
26.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
26.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
26.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
26.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
25.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
25.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
25.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
25.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
25.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
25.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
25.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
25.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
25.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
24.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
24.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
24.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
24.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
24.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
24.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
23.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
23.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
23.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
23.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
23.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
23.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
23.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
23.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
23.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
23.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
23.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
23.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
23.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
23.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
22.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
22.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
22.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
22.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
22.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
22.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
22.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
22.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
22.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
22.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
21.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
21.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
21.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
21.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
21.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
21.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
21.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
21.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
21.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
20.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
20.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
20.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
20.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
20.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
20.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
20.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
20.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
20.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
20.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
19.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
19.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
19.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
19.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
19.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
19.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
19.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
19.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
19.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
19.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
19.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
19.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
18.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
18.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
18.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
18.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
18.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
18.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
18.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
18.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
18.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
18.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
17.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
17.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
17.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
17.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
17.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
17.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
17.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
17.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
17.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
17.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
17.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
16.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
16.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
16.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
16.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
16.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
16.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
16.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
16.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
16.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
16.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
16.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
16.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
16.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
16.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
16.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
16.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
16.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
16.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
16.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
15.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
15.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
15.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
15.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
15.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
15.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
15.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
15.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
15.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
14.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
14.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
14.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
14.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
14.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
14.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
14.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
14.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
14.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
14.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
13.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
13.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
12.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
12.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
12.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
11.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
11.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
11.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
8.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
8.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
7.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
7.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
4.9
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0006950001
Normal
2.1
CPT0078940001
Normal
1.7
CPT0000790001
Normal
1.7
CPT0078530001
Normal
1.6
CPT0001500009
Tumor
1.5
CPT0079000001
Normal
1.4
CPT0066430001
Normal
1.4
CPT0014350001
Normal
1.4
CPT0000890001
Normal
1.3
CPT0019160001
Normal
1.2
CPT0026410003
Tumor
1.2
CPT0089480003
Normal
1.2
CPT0077140001
Normal
1.2
CPT0088640003
Normal
1.2
CPT0023360001
Normal
1.1
CPT0010170001
Normal
1.1
CPT0086970003
Normal
1.0
CPT0089040001
Normal
1.0
CPT0006730001
Normal
1.0
CPT0081620001
Normal
1.0
CPT0007870001
Normal
1.0
CPT0007470001
Normal
1.0
CPT0088500001
Normal
0.9
CPT0092740003
Normal
0.9
CPT0025610001
Normal
0.9
CPT0092800003
Normal
0.9
CPT0076350001
Normal
0.9
CPT0001270001
Normal
0.8
CPT0009080003
Normal
0.8
CPT0065820001
Normal
0.7
CPT0020130001
Normal
0.7
CPT0020020001
Normal
0.6
CPT0069010001
Normal
0.6
CPT0009060003
Tumor
0.5
CPT0000870016
Tumor
0.5
CPT0001550001
Normal
0.4
CPT0087050003
Normal
0.4
CPT0086830003
Normal
0.4
CPT0078670001
Normal
0.4
CPT0000660001
Normal
0.4
CPT0001260009
Tumor
0.4
CPT0064400001
Normal
0.4
CPT0079480003
Tumor
0.4
CPT0079230003
Tumor
0.3
CPT0086890003
Normal
0.2
CPT0079410003
Tumor
0.2
CPT0001540009
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0086870003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0012290003
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0014370004
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0017850003
Tumor
-0.2
CPT0006530001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0012640003
Normal
-0.3
CPT0012280003
Tumor
-0.3
CPT0075130003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0086950003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0065430003
Tumor
-0.4
CPT0025920001
Normal
-0.4
CPT0069190001
Normal
-0.4
CPT0007320003
Tumor
-0.4
CPT0017410003
Tumor
-0.4
CPT0079380003
Tumor
-0.5
CPT0020120003
Tumor
-0.5
CPT0066480003
Tumor
-0.6
CPT0012920003
Normal
-0.6
CPT0087040003
Tumor
-0.6
CPT0012900004
Tumor
-0.6
CPT0082010001
Normal
-0.6
CPT0015810003
Tumor
-0.6
CPT0017450001
Normal
-0.6
CPT0010110003
Tumor
-0.7
CPT0079430001
Normal
-0.7
CPT0065450001
Normal
-0.7
CPT0006900003
Tumor
-0.7
CPT0009000003
Tumor
-0.7
CPT0069000003
Tumor
-0.7
CPT0006440003
Tumor
-0.7
CPT0025880003
Tumor
-0.8
CPT0009020003
Normal
-0.8
CPT0066520001
Normal
-0.8
CPT0086820003
Tumor
-0.8
CPT0078510003
Tumor
-0.8
CPT0063330001
Normal
-0.8
CPT0078990003
Tumor
-0.9
CPT0001350001
Normal
-0.9
CPT0025580004
Tumor
-0.9
CPT0079510001
Normal
-0.9
CPT0092790003
Tumor
-0.9
CPT0077110003
Tumor
-0.9
CPT0088480003
Tumor
-0.9
CPT0025230003
Tumor
-1.0
CPT0064370003
Tumor
-1.0
CPT0021240003
Tumor
-1.0
CPT0010120001
Normal
-1.0
CPT0065870003
Tumor
-1.1
CPT0088970003
Tumor
-1.1
CPT0063320003
Tumor
-1.1
CPT0081990003
Tumor
-1.1
CPT0092160003
Tumor
-1.1
CPT0000640003
Tumor
-1.2
CPT0065810003
Tumor
-1.2
CPT0086370003
Normal
-1.2
CPT0085670003
Tumor
-1.2
CPT0015910003
Tumor
-1.3
CPT0019990003
Tumor
-1.3
CPT0076330003
Tumor
-1.3
CPT0089020003
Tumor
-1.4
CPT0001340003
Tumor
-1.4
CPT0078800003
Tumor
-1.4
CPT0077320001
Normal
-1.4
CPT0086360003
Tumor
-1.4
CPT0086030003
Tumor
-1.4
CPT0026420001
Normal
-1.4
CPT0007860003
Tumor
-1.5
CPT0084590001
Normal
-1.5
CPT0006630003
Tumor
-1.6
CPT0001180009
Tumor
-1.6
CPT0065750003
Tumor
-1.7
CPT0092190003
Normal
-1.7
CPT0069160003
Tumor
-1.8
CPT0078930003
Tumor
-1.8
CPT0084560003
Tumor
-1.9
CPT0089460004
Tumor
-2.0
CPT0088630003
Tumor
-2.1
CPT0092730003
Tumor
-2.1
CPT0077310003
Tumor
-2.2
CPT0023350003
Tumor
-2.7
CPT0066470004
Tumor
-4.7
CPT0002370001
Normal
N/A
CPT0088570001
Normal
N/A
CPT0065690003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0078830003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0088760003
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0078840001
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0014470001
Normal
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0063640001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0088690003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0088780001
Normal
N/A
CPT0079300001
Normal
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0025060001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
