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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Squamous epithelial cells:
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
3.8
nTPM
GTEx:
3.8
nTPM
FANTOM5:
0.9
Scaled Tags Per Million
VAGINA - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA039079
Antibody CAB002594
Squamous epithelial cells
Not detected
Not detected
VAGINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
3.8
GTEx sample id
Sample description
nTPM
Vagina Average nTPM: 3.8
Samples: 156
Max nTPM: 19.1
Min nTPM: 0.4
Std nTPM: 3.1
Median nTPM: 2.8
GTEX-1LH75-1726-SM-DHXKZ
50-59 years, female
19.1
GTEX-1JN1M-2326-SM-ARZNG
60-69 years, female
16.3
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
14.8
GTEX-1JMQL-2326-SM-CNNPV
50-59 years, female
14.0
GTEX-1GF9U-1926-SM-7P8TZ
40-49 years, female
13.5
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
13.1
GTEX-1JN76-1526-SM-CNPPF
20-29 years, female
11.7
GTEX-1S5ZU-2626-SM-E9TII
20-29 years, female
11.1
GTEX-14JG6-0726-SM-69LQH
30-39 years, female
10.4
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
8.8
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
8.5
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
7.3
GTEX-Q734-1426-SM-DTXFX
40-49 years, female
7.2
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
7.0
GTEX-15SDE-1726-SM-6LPJS
50-59 years, female
6.8
GTEX-1J1OQ-1826-SM-CL53R
40-49 years, female
6.8
GTEX-1R9JW-1426-SM-DTX9K
30-39 years, female
6.8
GTEX-QCQG-1226-SM-48U23
50-59 years, female
6.7
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
6.6
GTEX-14PJ6-1626-SM-6872D
60-69 years, female
6.6
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
6.6
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
6.6
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
6.2
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
6.1
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
6.0
GTEX-WYVS-1426-SM-4ONCV
40-49 years, female
5.8
GTEX-1F5PL-1826-SM-7P8PP
40-49 years, female
5.8
GTEX-17JCI-2526-SM-7DHLB
60-69 years, female
5.7
GTEX-1A8FM-2426-SM-7IGPE
50-59 years, female
5.7
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
5.6
GTEX-183WM-2126-SM-7LG4I
70-79 years, female
5.5
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
5.5
GTEX-14PJM-2926-SM-69LOE
50-59 years, female
5.4
GTEX-1LNCM-1026-SM-E9U5D
50-59 years, female
5.3
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
5.2
GTEX-15ER7-2526-SM-7KUFW
20-29 years, female
5.2
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
5.2
GTEX-1AMFI-1526-SM-73KVY
50-59 years, female
5.1
GTEX-OHPN-2426-SM-E9TI5
60-69 years, female
5.0
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
4.7
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
4.6
GTEX-1HCU6-2326-SM-ACKXP
60-69 years, female
4.6
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
4.5
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
4.4
GTEX-1ICG6-1626-SM-ARL81
70-79 years, female
4.3
GTEX-1C475-0526-SM-793AC
40-49 years, female
4.1
GTEX-14PN3-1626-SM-6AJAV
60-69 years, female
4.0
GTEX-17F9Y-2326-SM-7DUFP
70-79 years, female
4.0
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
4.0
GTEX-1PIEJ-1926-SM-EVYB7
20-29 years, female
4.0
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
3.9
GTEX-1HCUA-1026-SM-A9SMI
50-59 years, female
3.8
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
3.7
GTEX-1J8EW-2526-SM-CKZO2
60-69 years, female
3.7
GTEX-1QP28-1426-SM-EVR4E
50-59 years, female
3.7
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
3.6
GTEX-1IDJU-1026-SM-AHZ2U
60-69 years, female
3.5
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
3.4
GTEX-18A7A-2826-SM-7LT8J
50-59 years, female
3.4
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
3.4
GTEX-1HBPH-2926-SM-9WPNX
40-49 years, female
3.4
GTEX-16NPV-2526-SM-6M483
50-59 years, female
3.3
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
3.3
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
3.3
GTEX-QVJO-2526-SM-CYPRA
60-69 years, female
3.3
GTEX-14PKU-1326-SM-6871B
40-49 years, female
3.2
GTEX-XUZC-1226-SM-4BRVJ
30-39 years, female
3.2
GTEX-11I78-2026-SM-5987C
50-59 years, female
3.1
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
3.1
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
3.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
3.1
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
3.0
GTEX-1LGOU-1126-SM-D3LAI
20-29 years, female
3.0
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
2.9
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
2.9
GTEX-1LVAM-1926-SM-E6CIM
50-59 years, female
2.9
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
2.8
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
2.8
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
2.8
GTEX-15SB6-1426-SM-7KUEM
50-59 years, female
2.8
GTEX-S341-1226-SM-4AD5S
40-49 years, female
2.8
GTEX-1GN1U-2426-SM-9KNTU
50-59 years, female
2.8
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
2.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
2.7
GTEX-1QPFJ-1626-SM-DTX7X
30-39 years, female
2.7
GTEX-145LS-2526-SM-5TDC9
60-69 years, female
2.6
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
2.6
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
2.6
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
2.6
GTEX-1GMR8-2526-SM-7RHI9
50-59 years, female
2.6
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
2.5
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
2.5
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
2.5
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
2.4
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
2.4
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
2.4
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
2.4
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
2.4
GTEX-1NUQO-1826-SM-E6CQU
20-29 years, female
2.4
GTEX-1QCLZ-2226-SM-DTX7R
60-69 years, female
2.4
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
2.3
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
2.3
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
2.3
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
2.3
GTEX-15UF6-2126-SM-6M46Z
70-79 years, female
2.2
GTEX-16NGA-1626-SM-72D6M
40-49 years, female
2.2
GTEX-1F48J-2526-SM-7P8TU
50-59 years, female
2.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
2.1
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
2.1
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
2.1
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
2.1
GTEX-15SHU-2926-SM-7KUKT
40-49 years, female
2.0
GTEX-1HBPM-2726-SM-9WYUA
60-69 years, female
2.0
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
1.8
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
1.8
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
1.7
GTEX-15DYW-2926-SM-6PANA
60-69 years, female
1.7
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
1.7
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
1.7
GTEX-NPJ7-2526-SM-EV79A
60-69 years, female
1.7
GTEX-SN8G-2626-SM-EXUQT
50-59 years, female
1.7
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
1.6
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
1.6
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
1.6
GTEX-14H4A-2426-SM-664OQ
40-49 years, female
1.6
GTEX-1I1GT-1226-SM-B2LVK
60-69 years, female
1.6
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
1.5
GTEX-1LVAN-1626-SM-CNPQ7
50-59 years, female
1.5
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
1.4
GTEX-1I4MK-1726-SM-ARL7O
50-59 years, female
1.4
GTEX-1MCYP-1326-SM-EV7AD
20-29 years, female
1.4
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
1.3
GTEX-1CAMS-2326-SM-793CR
40-49 years, female
1.3
GTEX-1EWIQ-2326-SM-7IGNF
70-79 years, female
1.3
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
1.3
GTEX-1IE54-2626-SM-CMKFY
40-49 years, female
1.3
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
1.2
GTEX-18D9A-1026-SM-7KFRU
30-39 years, female
1.2
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
1.2
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
1.2
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
1.1
GTEX-1GN1W-1526-SM-7P8TG
50-59 years, female
1.1
GTEX-1HCU8-2026-SM-9YFLE
60-69 years, female
1.1
GTEX-1LGRB-2126-SM-COH48
50-59 years, female
1.1
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
1.0
GTEX-1MCC2-1126-SM-EVYD6
30-39 years, female
1.0
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
0.9
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
0.9
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
0.9
GTEX-ZAK1-2426-SM-EXOHM
50-59 years, female
0.9
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
0.8
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
0.8
GTEX-1HFI7-1126-SM-A96S5
50-59 years, female
0.7
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
0.5
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
0.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
0.4
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VAGINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
