HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:15.5 nTPM
HPA Brain:51.8 nTPM
GTEx:15.5 nTPM
FANTOM5:63.1 Scaled Tags Per Million
Pig:51.1 nTPM
Mouse:42.4 nTPM
Allen mouse:9.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB001960Antibody CAB016353
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 51.8
Sample id Sample description nTPM
Hippocampus
nTPM: 51.8
2529 Female, age 94, left hemisphere 59.1
2148 Female, age 91, left hemisphere 56.0
1855 Male, age 76, left hemisphere 53.5
1911 Female, age 85, right hemisphere 47.8
1898 Male, age 80, left hemisphere 47.4
2621 Female, age 67, right hemisphere 46.9
Dentate gyrus
nTPM: 45.0
2528 Male, age 74, both hemispheres 51.6
2530 Female, age 94, left hemisphere 51.6
2010 Male, age 76, both hemispheres 45.3
2246 Female, age 85, both hemispheres 44.4
1927 Female, age 91, both hemispheres 39.5
2531 Female, age 67, both hemispheres 37.4
Entorhinal gyrus
nTPM: 44.0
2117 Female, age 91, right hemisphere 61.6
1938 Female, age 85, left hemisphere 41.7
1787 Male, age 76, left hemisphere 41.1
2686 Male, age 75, right hemisphere 40.7
2764 Male, age 80, right hemisphere 39.9
2613 Female, age 94, left hemisphere 38.8
Hippocampus, CA1
nTPM: 44.7
2527 Male, age 74, both hemispheres 50.8
1873 Female, age 85, both hemispheres 47.2
2045 Male, age 76, both hemispheres 44.8
2082 Female, age 91, right hemisphere 41.1
2749 Male, age 80, left hemisphere 39.5
Hippocampus, CA2
nTPM: 43.2
2249 Male, age 74, both hemispheres 48.5
2437 Female, age 94, left hemisphere 47.3
2113 Female, age 91, right hemisphere 43.5
1940 Female, age 85, left hemisphere 41.9
1963 Male, age 80, left hemisphere 41.7
1892 Male, age 76, both hemispheres 36.4
Hippocampus, CA3
nTPM: 45.7
2620 Female, age 94, left hemisphere 54.9
2861 Female, age 67, both hemispheres 52.2
1891 Female, age 85, both hemispheres 46.1
2436 Male, age 74, both hemispheres 45.8
1867 Male, age 76, both hemispheres 38.7
2137 Male, age 80, left hemisphere 36.6
Parahippocampal cortex
nTPM: 40.9
2692 Male, age 74, both hemispheres 46.1
2622 Female, age 67, right hemisphere 45.1
2245 Female, age 91, both hemispheres 43.7
2018 Male, age 76, both hemispheres 42.3
1850 Male, age 80, both hemispheres 40.1
1933 Female, age 85, both hemispheres 39.7
2250 Female, age 67, right hemisphere 39.1
1990 Female, age 91, right hemisphere 38.0
2532 Female, age 72, left hemisphere 37.7
2693 Female, age 94, both hemispheres 37.1
Perirhinal gyrus
nTPM: 38.1
1794 Male, age 80, right hemisphere 43.6
1847 Female, age 91, left hemisphere 38.3
1841 Female, age 85, right hemisphere 37.6
2521 Female, age 94, right hemisphere 37.4
2848 Male, age 76, right hemisphere 33.7
Subiculum
nTPM: 47.1
2729 Female, age 91, right hemisphere 52.6
2438 Female, age 94, left hemisphere 52.2
2619 Male, age 74, both hemispheres 51.8
2042 Male, age 76, both hemispheres 46.1
1901 Male, age 80, both hemispheres 41.0
1977 Female, age 85, both hemispheres 39.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 15.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.5
Samples: 197

Max nTPM: 33.3
Min nTPM: 4.7
Std nTPM: 4.1
Median nTPM: 15.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 33.3
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 25.5
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 25.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 25.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 24.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 24.9
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 24.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 23.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 23.2
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 23.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 23.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 63.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.1
FF:10153-102I9 76 years, female 87.9
FF:10169-103B7 60 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 51.1
Pig sample Sample description nTPM
Subiculum
nTPM: 50.4
Samples: 4

Max nTPM: 56.0
Min nTPM: 44.6
Sample A Female 56.0
Sample B Female 46.0
Sample C Male 54.8
Sample D Male 44.6
Dorsal hippocampus
nTPM: 49.3
Samples: 4

Max nTPM: 51.8
Min nTPM: 44.6
Sample A Female 49.9
Sample B Female 50.8
Sample C Male 51.8
Sample D Male 44.6
Entorhinal cortex
nTPM: 48.6
Samples: 4

Max nTPM: 54.3
Min nTPM: 42.3
Sample A Female 54.3
Sample B Female 44.2
Sample C Male 53.5
Sample D Male 42.3
Ventral hippocampus
nTPM: 51.1
Samples: 4

Max nTPM: 68.9
Min nTPM: 42.4
Sample A Female 42.6
Sample B Female 42.4
Sample C Male 68.9
Sample D Male 50.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 42.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.4
Samples: 4

Max nTPM: 51.0
Min nTPM: 36.5
Sample A Male 43.3
Sample B Male 36.5
Sample C Female 38.8
Sample D Female 51.0
Hippocampal formation
nTPM: 40.5
Samples: 4

Max nTPM: 45.6
Min nTPM: 33.4
Sample A Male 33.4
Sample B Male 42.3
Sample C Female 45.6
Sample D Female 40.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.1
355892 Antisense, RP_040617_01_F11, Mouse strain C57BL/6J (56 days, male) 14.8
68269039 Antisense, RP_041208_01_F02, Mouse strain C57BL/6J (56 days, male) 3.3

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