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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMCC1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
40.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
24.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
16.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
15.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
14.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
13.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
11.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
8.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
8.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
6.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
6.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
5.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
4.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
4.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
4.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
4.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
4.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
4.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
4.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
4.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
3.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
3.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
3.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
3.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
3.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
3.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
3.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
3.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
3.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
2.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
2.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
2.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
2.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
2.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
2.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
2.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
1.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
1.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
1.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMCC1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
84.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
447.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
324.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
318.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
311.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
306.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
278.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
271.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
267.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
266.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
264.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
258.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
243.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
240.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
229.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
219.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
216.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
213.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
209.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
205.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
205.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
201.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
201.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
194.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
193.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
190.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
189.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
188.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
187.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
183.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
182.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
178.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
178.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
178.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
176.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
176.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
176.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
174.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
174.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
173.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
171.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
169.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
167.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
164.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
162.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
162.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
159.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
156.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
155.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
155.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
154.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
153.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
152.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
151.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
151.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
151.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
151.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
150.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
150.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
148.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
147.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
146.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
146.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
146.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
145.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
145.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
145.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
145.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
144.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
143.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
142.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
142.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
142.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
142.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
141.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
141.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
140.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
139.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
138.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
138.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
137.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
137.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
137.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
136.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
136.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
136.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
136.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
135.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
135.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
135.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
135.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
134.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
134.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
134.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
133.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
133.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
133.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
132.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
131.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
131.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
131.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
131.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
130.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
130.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
128.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
128.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
127.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
127.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
127.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
127.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
126.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
126.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
125.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
125.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
125.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
124.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
124.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
124.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
122.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
122.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
121.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
121.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
121.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
120.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
120.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
120.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
119.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
119.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
118.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
118.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
118.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
117.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
117.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
117.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
117.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
117.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
117.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
116.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
116.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
115.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
115.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
115.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
115.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
114.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
114.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
114.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
114.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
113.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
112.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
112.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
112.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
112.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
111.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
111.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
111.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
110.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
110.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
109.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
109.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
109.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
109.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
108.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
107.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
107.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
107.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
106.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
106.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
106.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
106.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
106.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
106.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
105.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
104.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
104.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
104.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
103.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
103.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
103.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
101.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
101.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
101.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
101.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
101.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
101.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
100.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
100.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
99.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
99.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
99.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
98.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
98.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
98.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
97.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
97.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
96.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
96.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
96.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
96.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
95.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
94.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
94.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
94.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
94.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
93.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
93.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
92.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
92.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
92.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
92.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
92.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
91.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
91.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
90.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
90.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
89.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
89.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
89.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
89.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
89.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
89.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
88.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
88.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
88.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
87.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
87.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
86.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
86.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
86.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
86.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
85.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
85.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
84.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
83.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
83.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
83.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
83.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
82.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
82.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
82.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
82.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
81.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
81.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
81.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
81.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
80.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
80.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
80.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
79.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
79.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
79.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
79.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
79.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
79.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
78.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
78.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
78.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
78.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
77.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
77.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
77.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
77.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
77.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
77.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
77.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
77.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
77.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
77.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
76.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
76.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
76.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
76.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
75.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
75.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
75.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
74.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
74.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
74.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
74.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
73.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
73.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
72.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
72.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
71.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
71.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
71.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
71.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
70.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
70.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
70.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
70.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
69.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
69.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
67.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
67.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
67.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
67.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
66.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
66.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
66.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
66.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
65.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
65.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
65.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
65.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
64.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
64.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
64.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
63.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
63.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
63.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
62.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
62.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
62.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
62.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
61.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
61.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
60.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
60.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
60.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
60.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
59.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
59.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
58.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
58.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
58.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
57.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
57.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
57.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
57.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
56.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
56.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
56.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
56.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
55.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
55.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
55.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
55.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
55.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
54.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
54.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
54.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
54.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
53.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
53.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
53.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
53.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
53.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
53.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
52.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
52.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
52.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
52.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
51.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
51.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
51.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
50.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
50.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
50.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
49.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
48.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
48.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
48.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
47.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
47.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
47.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
47.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
47.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
47.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
47.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
46.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
46.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
46.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
45.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
45.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
45.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
45.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
44.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
44.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
44.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
42.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
42.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
42.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
42.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
41.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
41.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
41.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
41.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
40.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
40.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
40.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
40.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
39.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
39.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
39.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
39.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
39.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
39.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
39.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
38.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
38.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
38.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
38.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
38.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
38.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
38.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
37.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
37.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
37.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
35.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
34.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
34.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
34.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
33.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
33.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
33.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
33.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
32.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
32.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
30.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
30.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
30.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
30.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
30.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
30.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
29.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
29.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
29.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
28.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
27.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
27.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
27.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
27.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
27.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
26.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
26.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
25.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
25.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
25.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
25.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
25.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
25.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
25.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
24.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
24.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
24.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
23.8
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
23.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
23.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
23.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
22.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
22.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
21.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
21.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
21.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
20.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
20.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
19.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
19.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
16.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
16.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
15.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
13.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
13.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
12.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
12.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
11.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
11.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
10.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
10.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
10.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
10.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
9.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
8.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
8.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
8.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
8.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
7.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
7.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
6.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
6.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
6.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
5.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
5.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
5.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
4.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
4.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
3.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
3.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
3.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMCC1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
126.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
384.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
323.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
276.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
272.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
245.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
242.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
239.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
231.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
229.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
227.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
225.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
210.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
208.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
208.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
205.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
200.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
198.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
192.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
189.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
184.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
183.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
181.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
178.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
177.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
175.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
169.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
165.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
163.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
163.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
161.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
160.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
157.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
156.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
147.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
146.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
146.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
144.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
140.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
139.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
138.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
137.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
134.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
133.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
128.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
126.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
126.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
122.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
120.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
118.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
118.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
116.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
115.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
114.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
113.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
110.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
109.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
106.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
104.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
103.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
103.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
102.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
101.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
101.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
99.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
93.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
91.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
89.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
88.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
88.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
88.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
88.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
86.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
83.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
83.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
79.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
76.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
73.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
72.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
62.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
61.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
60.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
57.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
57.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
55.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
47.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
46.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
44.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
44.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
39.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
37.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
32.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
25.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
23.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
16.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
14.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
11.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
9.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
6.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
4.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMCC1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
114.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
69.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
64.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
46.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
46.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
42.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
39.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
38.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
38.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
36.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
35.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
35.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
34.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
33.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
32.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
30.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
30.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
29.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
26.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
25.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
23.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
23.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
21.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
21.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
20.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
20.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
20.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
19.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
19.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
18.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
18.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
17.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
17.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
16.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
16.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
16.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
16.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
15.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
15.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
14.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
14.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
14.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
13.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
13.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
13.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
12.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
12.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
12.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
12.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
12.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
12.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
12.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
12.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
12.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
11.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
11.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
11.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
11.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
11.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
11.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
11.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
11.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
11.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
10.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
10.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
10.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
10.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
10.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
10.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
10.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
9.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
9.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
9.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
9.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
9.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
9.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
9.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
9.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
9.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
9.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
9.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
9.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
8.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
8.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
8.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
8.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
8.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
8.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
8.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
8.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
8.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
8.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
8.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
7.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
7.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
7.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
7.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
7.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
7.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
7.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
7.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
7.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
7.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
6.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
6.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
6.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
6.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
6.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
6.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
6.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
6.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
6.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
6.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
6.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
6.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
6.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
6.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
6.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
6.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
5.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
5.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
5.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
5.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
5.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
5.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
5.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
5.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
5.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
5.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
5.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
5.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
5.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
5.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
5.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
5.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
5.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
5.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
5.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
5.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
5.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
5.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
5.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
5.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
5.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
5.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
5.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
4.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
4.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
4.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
4.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
4.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
4.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
4.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
4.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
4.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
4.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
4.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
4.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
4.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
4.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
4.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
4.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
4.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
4.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
4.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
4.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
4.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
4.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
4.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
3.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
3.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
3.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
3.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
3.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
3.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
3.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
3.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
3.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
3.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
3.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
3.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
3.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
3.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
3.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
3.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
3.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
2.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
2.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
2.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
2.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
2.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
2.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
1.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
1.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0023350003
Tumor
1.8
CPT0001340003
Tumor
1.8
CPT0020120003
Tumor
1.3
CPT0087040003
Tumor
1.0
CPT0002350011
Tumor
1.0
CPT0077310003
Tumor
0.9
CPT0089460004
Tumor
0.8
CPT0088690003
Tumor
0.7
CPT0085670003
Tumor
0.6
CPT0063630003
Tumor
0.5
CPT0078930003
Tumor
0.5
CPT0088550004
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0077500001
Normal
0.4
CPT0025230003
Tumor
0.4
CPT0079230003
Tumor
0.4
CPT0014160003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0025920001
Normal
0.3
CPT0077490003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0071150004
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0075560003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0012920003
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0089480003
Normal
0.0
CPT0088920001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0025880003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0001510001
Normal
-0.2
CPT0025050003
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0088780001
Normal
-0.3
CPT0021240003
Tumor
-0.3
CPT0009080003
Normal
-0.3
CPT0079300001
Normal
-0.3
CPT0078830003
Tumor
-0.3
CPT0078660003
Tumor
-0.3
CPT0014470001
Normal
-0.3
CPT0014450004
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0088710001
Normal
-0.4
CPT0063640001
Normal
-0.4
CPT0023690003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0002370001
Normal
-0.4
CPT0078670001
Normal
-0.5
CPT0092290003
Tumor
-0.5
CPT0069160003
Tumor
-0.6
CPT0087050003
Normal
-0.7
CPT0017450001
Normal
-0.7
CPT0001350001
Normal
-0.7
CPT0077320001
Normal
-0.8
CPT0009060003
Tumor
-0.8
CPT0020130001
Normal
-0.8
CPT0025060001
Normal
-0.9
CPT0001230001
Normal
-1.0
CPT0079430001
Normal
-1.1
CPT0092310003
Normal
-1.1
CPT0023360001
Normal
-1.2
CPT0014130001
Normal
-1.3
CPT0075170001
Normal
-2.6
CPT0026410003
Tumor
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0064370003
Tumor
N/A
CPT0007870001
Normal
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0092190003
Normal
N/A
CPT0077140001
Normal
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0010170001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0069000003
Tumor
N/A
CPT0092160003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0077110003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0076350001
Normal
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
