HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:20.7 nTPM
HPA Brain:43.3 nTPM
GTEx:20.7 nTPM
FANTOM5:75.2 Scaled Tags Per Million
Pig:51.4 nTPM
Mouse:27.2 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024062Antibody CAB025642
Glial cells Not detectedMedium
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 43.3
Sample id Sample description nTPM
Hippocampus
nTPM: 39.9
1911 Female, age 85, right hemisphere 44.7
2529 Female, age 94, left hemisphere 41.5
1898 Male, age 80, left hemisphere 41.2
2621 Female, age 67, right hemisphere 38.4
2148 Female, age 91, left hemisphere 37.4
1855 Male, age 76, left hemisphere 36.4
Dentate gyrus
nTPM: 38.0
2528 Male, age 74, both hemispheres 43.1
2010 Male, age 76, both hemispheres 41.9
2246 Female, age 85, both hemispheres 38.1
1927 Female, age 91, both hemispheres 36.9
2530 Female, age 94, left hemisphere 36.3
2531 Female, age 67, both hemispheres 31.8
Entorhinal gyrus
nTPM: 38.0
2117 Female, age 91, right hemisphere 50.1
1938 Female, age 85, left hemisphere 40.9
2686 Male, age 75, right hemisphere 38.1
2764 Male, age 80, right hemisphere 35.4
1787 Male, age 76, left hemisphere 34.3
2613 Female, age 94, left hemisphere 28.9
Hippocampus, CA1
nTPM: 38.6
2527 Male, age 74, both hemispheres 44.5
1873 Female, age 85, both hemispheres 41.4
2082 Female, age 91, right hemisphere 39.1
2749 Male, age 80, left hemisphere 35.1
2045 Male, age 76, both hemispheres 32.7
Hippocampus, CA2
nTPM: 39.1
2249 Male, age 74, both hemispheres 45.7
1963 Male, age 80, left hemisphere 42.1
2113 Female, age 91, right hemisphere 41.7
1940 Female, age 85, left hemisphere 37.8
2437 Female, age 94, left hemisphere 34.5
1892 Male, age 76, both hemispheres 33.2
Hippocampus, CA3
nTPM: 38.5
1891 Female, age 85, both hemispheres 52.1
2436 Male, age 74, both hemispheres 41.9
1867 Male, age 76, both hemispheres 40.2
2137 Male, age 80, left hemisphere 35.0
2861 Female, age 67, both hemispheres 31.1
2620 Female, age 94, left hemisphere 30.5
Parahippocampal cortex
nTPM: 37.9
2018 Male, age 76, both hemispheres 44.2
2692 Male, age 74, both hemispheres 43.7
1933 Female, age 85, both hemispheres 40.6
1990 Female, age 91, right hemisphere 38.3
2532 Female, age 72, left hemisphere 37.9
1850 Male, age 80, both hemispheres 37.8
2250 Female, age 67, right hemisphere 37.5
2693 Female, age 94, both hemispheres 35.2
2245 Female, age 91, both hemispheres 34.4
2622 Female, age 67, right hemisphere 29.0
Perirhinal gyrus
nTPM: 34.0
1841 Female, age 85, right hemisphere 38.1
2521 Female, age 94, right hemisphere 34.6
2848 Male, age 76, right hemisphere 33.8
1847 Female, age 91, left hemisphere 32.2
1794 Male, age 80, right hemisphere 31.1
Subiculum
nTPM: 43.3
2042 Male, age 76, both hemispheres 48.0
1901 Male, age 80, both hemispheres 44.9
1977 Female, age 85, both hemispheres 43.2
2438 Female, age 94, left hemisphere 41.6
2729 Female, age 91, right hemisphere 41.4
2619 Male, age 74, both hemispheres 40.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 20.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.7
Samples: 197

Max nTPM: 60.7
Min nTPM: 9.4
Std nTPM: 7.6
Median nTPM: 18.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 60.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 43.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 42.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 39.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 38.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 37.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 37.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 36.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 35.6
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 35.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 34.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 75.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.2
FF:10153-102I9 76 years, female 87.0
FF:10169-103B7 60 years, female 63.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 51.4
Pig sample Sample description nTPM
Subiculum
nTPM: 46.0
Samples: 4

Max nTPM: 52.2
Min nTPM: 40.9
Sample A Female 52.2
Sample B Female 44.6
Sample C Male 40.9
Sample D Male 46.2
Dorsal hippocampus
nTPM: 51.4
Samples: 4

Max nTPM: 57.5
Min nTPM: 44.7
Sample A Female 57.5
Sample B Female 47.9
Sample C Male 55.5
Sample D Male 44.7
Entorhinal cortex
nTPM: 44.0
Samples: 4

Max nTPM: 49.6
Min nTPM: 40.6
Sample A Female 43.0
Sample B Female 49.6
Sample C Male 42.6
Sample D Male 40.6
Ventral hippocampus
nTPM: 43.1
Samples: 4

Max nTPM: 50.6
Min nTPM: 33.9
Sample A Female 46.1
Sample B Female 41.7
Sample C Male 33.9
Sample D Male 50.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 27.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.2
Samples: 4

Max nTPM: 27.9
Min nTPM: 26.4
Sample A Male 26.4
Sample B Male 26.9
Sample C Female 27.9
Sample D Female 27.6
Hippocampal formation
nTPM: 26.9
Samples: 4

Max nTPM: 29.7
Min nTPM: 24.3
Sample A Male 29.7
Sample B Male 24.3
Sample C Female 26.9
Sample D Female 26.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
1895 Antisense, RP_040420_01_D12, Mouse strain C57BL/6J (56 days, male) 0.9
1894 Antisense, RP_040420_01_D12, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org