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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPS9 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
90.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
199.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
194.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
186.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
158.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
141.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
139.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
136.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
125.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
124.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
123.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
123.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
118.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
117.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
117.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
112.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
110.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
106.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
106.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
105.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
104.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
103.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
102.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
102.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
100.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
100.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
100.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
98.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
97.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
90.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
90.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
89.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
87.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
86.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
86.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
86.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
83.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
83.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
82.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
82.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
80.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
79.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
74.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
73.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
72.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
69.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
68.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
67.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
67.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
66.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
63.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
63.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
62.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
61.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
58.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
53.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
50.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
45.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
40.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
39.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
37.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
31.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
17.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPS9 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
102.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
619.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
466.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
273.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
272.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
245.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
234.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
226.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
225.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
220.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
219.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
217.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
199.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
186.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
186.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
183.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
183.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
183.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
178.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
176.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
176.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
174.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
174.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
173.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
173.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
172.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
172.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
171.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
170.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
168.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
167.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
166.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
163.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
161.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
161.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
160.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
160.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
158.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
157.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
157.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
156.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
155.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
154.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
154.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
153.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
152.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
152.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
151.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
151.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
150.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
150.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
149.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
149.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
149.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
149.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
147.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
146.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
145.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
145.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
144.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
142.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
142.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
141.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
140.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
140.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
140.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
140.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
139.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
139.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
138.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
137.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
135.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
135.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
134.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
134.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
133.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
133.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
132.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
132.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
130.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
130.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
129.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
129.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
128.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
128.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
128.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
127.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
127.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
127.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
127.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
126.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
126.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
125.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
125.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
125.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
123.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
123.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
122.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
122.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
122.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
122.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
122.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
121.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
121.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
121.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
120.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
120.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
120.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
120.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
120.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
119.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
119.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
119.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
118.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
118.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
118.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
118.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
118.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
118.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
118.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
117.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
117.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
117.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
117.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
117.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
117.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
116.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
116.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
115.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
115.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
115.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
115.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
114.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
114.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
114.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
114.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
114.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
113.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
113.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
113.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
113.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
113.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
112.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
112.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
112.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
112.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
111.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
111.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
111.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
111.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
111.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
111.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
111.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
111.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
110.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
110.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
110.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
110.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
110.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
110.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
109.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
109.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
109.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
109.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
109.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
108.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
108.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
108.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
108.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
108.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
108.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
108.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
107.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
107.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
107.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
107.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
106.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
106.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
105.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
105.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
105.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
105.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
105.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
105.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
104.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
104.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
104.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
104.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
104.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
104.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
104.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
103.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
103.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
103.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
102.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
102.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
102.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
102.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
102.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
102.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
102.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
102.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
102.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
102.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
101.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
101.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
101.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
101.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
101.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
101.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
101.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
101.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
100.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
100.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
100.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
100.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
100.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
100.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
100.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
99.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
99.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
99.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
99.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
99.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
99.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
99.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
99.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
99.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
99.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
99.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
99.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
99.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
99.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
98.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
98.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
98.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
98.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
98.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
97.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
97.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
97.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
97.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
97.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
97.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
97.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
96.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
96.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
96.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
96.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
96.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
96.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
96.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
96.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
95.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
95.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
95.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
95.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
95.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
95.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
94.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
94.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
94.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
94.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
94.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
94.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
94.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
94.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
94.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
94.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
93.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
93.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
93.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
93.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
93.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
93.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
93.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
93.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
93.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
93.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
93.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
93.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
92.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
92.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
92.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
92.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
92.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
92.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
92.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
91.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
91.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
91.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
91.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
91.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
91.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
91.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
91.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
91.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
91.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
91.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
90.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
90.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
90.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
90.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
90.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
90.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
90.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
90.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
90.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
90.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
89.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
89.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
89.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
89.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
89.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
88.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
88.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
88.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
88.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
88.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
88.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
88.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
88.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
88.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
88.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
88.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
88.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
88.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
87.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
87.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
87.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
87.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
87.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
87.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
87.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
87.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
87.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
86.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
86.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
86.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
86.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
86.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
86.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
86.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
86.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
86.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
86.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
86.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
86.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
85.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
85.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
85.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
85.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
85.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
85.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
85.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
85.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
85.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
85.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
84.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
84.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
84.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
83.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
83.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
83.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
83.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
83.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
83.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
83.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
83.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
83.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
82.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
82.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
82.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
82.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
82.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
82.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
82.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
82.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
81.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
81.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
81.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
81.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
80.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
80.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
80.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
80.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
80.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
80.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
80.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
80.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
80.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
80.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
80.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
80.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
80.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
79.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
79.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
79.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
79.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
79.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
79.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
78.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
78.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
78.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
78.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
78.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
77.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
77.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
77.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
77.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
77.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
77.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
76.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
76.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
76.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
76.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
75.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
75.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
75.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
75.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
75.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
75.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
74.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
74.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
74.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
73.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
73.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
73.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
73.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
73.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
73.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
72.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
72.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
72.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
72.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
72.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
72.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
72.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
71.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
71.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
71.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
70.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
70.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
70.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
70.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
70.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
69.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
69.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
69.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
69.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
69.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
68.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
68.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
68.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
67.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
67.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
67.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
67.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
67.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
66.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
66.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
66.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
66.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
66.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
66.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
66.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
66.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
66.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
65.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
65.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
64.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
64.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
64.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
64.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
64.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
64.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
63.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
63.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
63.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
63.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
63.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
62.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
62.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
62.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
62.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
61.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
61.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
61.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
60.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
59.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
59.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
58.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
58.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
57.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
57.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
56.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
56.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
55.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
55.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
54.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
53.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
52.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
52.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
51.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
50.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
50.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
49.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
49.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
48.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
48.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
47.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
47.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
47.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
45.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
44.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
44.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
43.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
43.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
40.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
32.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
29.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPS9 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
89.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
183.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
157.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
144.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
142.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
137.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
135.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
130.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
123.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
116.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
116.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
115.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
115.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
113.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
113.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
111.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
110.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
108.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
107.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
107.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
105.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
105.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
105.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
104.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
104.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
103.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
102.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
102.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
101.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
100.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
98.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
97.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
97.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
95.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
95.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
95.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
94.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
94.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
93.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
92.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
91.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
91.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
91.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
90.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
90.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
90.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
89.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
89.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
88.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
87.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
87.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
87.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
87.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
87.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
87.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
86.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
86.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
86.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
86.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
86.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
86.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
84.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
83.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
82.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
82.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
82.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
82.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
81.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
81.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
80.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
79.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
79.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
79.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
78.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
76.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
74.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
73.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
73.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
72.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
71.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
69.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
67.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
66.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
66.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
66.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
64.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
63.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
63.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
63.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
61.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
57.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
56.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
54.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
49.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
49.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
47.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
46.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
44.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
44.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
COPS9 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
136.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
365.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
320.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
318.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
315.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
300.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
299.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
298.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
296.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
296.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
272.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
261.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
259.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
256.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
255.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
251.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
249.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
249.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
241.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
240.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
238.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
236.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
235.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
230.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
229.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
229.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
226.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
222.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
220.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
219.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
217.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
216.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
214.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
210.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
209.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
207.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
206.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
203.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
200.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
199.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
197.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
197.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
197.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
196.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
193.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
191.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
190.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
190.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
188.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
186.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
185.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
184.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
184.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
183.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
183.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
182.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
182.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
177.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
177.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
177.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
175.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
175.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
173.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
173.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
173.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
172.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
171.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
169.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
167.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
167.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
167.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
167.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
166.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
164.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
164.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
164.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
164.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
162.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
161.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
160.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
159.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
158.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
158.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
157.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
156.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
156.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
155.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
154.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
154.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
154.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
153.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
153.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
153.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
152.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
152.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
151.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
151.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
151.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
150.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
150.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
149.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
149.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
148.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
148.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
148.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
146.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
144.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
144.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
144.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
143.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
143.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
142.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
140.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
140.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
140.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
140.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
139.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
138.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
138.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
138.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
138.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
135.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
135.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
135.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
135.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
134.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
134.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
134.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
134.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
133.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
132.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
131.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
131.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
131.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
131.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
130.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
130.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
130.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
130.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
130.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
130.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
130.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
129.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
128.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
128.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
127.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
127.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
126.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
126.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
126.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
126.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
125.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
125.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
125.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
124.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
124.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
124.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
124.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
124.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
123.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
123.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
122.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
122.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
121.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
121.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
120.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
120.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
118.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
118.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
117.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
116.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
115.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
115.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
115.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
114.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
113.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
113.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
113.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
111.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
111.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
111.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
111.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
111.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
110.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
110.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
110.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
110.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
109.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
109.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
108.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
108.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
107.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
107.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
107.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
106.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
106.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
106.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
105.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
104.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
102.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
102.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
102.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
101.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
101.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
100.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
99.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
98.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
97.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
96.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
96.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
96.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
95.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
93.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
93.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
92.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
92.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
90.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
90.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
89.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
89.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
89.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
89.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
88.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
87.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
86.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
85.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
85.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
84.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
83.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
83.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
83.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
82.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
82.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
81.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
80.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
80.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
79.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
79.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
78.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
77.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
77.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
76.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
75.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
74.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
73.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
72.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
72.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
70.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
70.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
69.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
68.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
68.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
65.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
64.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
64.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
61.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
61.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
60.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
58.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
57.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
57.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
56.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
55.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
55.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
55.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
53.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
53.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
53.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
50.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
49.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
46.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
43.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
38.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
37.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
36.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
36.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
35.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
34.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
29.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
28.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
17.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
12.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
12.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0065930003
Tumor
1.5
CPT0075720003
Tumor
1.2
CPT0011410003
Tumor
1.1
CPT0025110003
Tumor
1.0
CPT0078510003
Tumor
0.9
CPT0011240003
Tumor
0.8
CPT0020120003
Tumor
0.6
CPT0064370003
Tumor
0.6
CPT0079230003
Tumor
0.6
CPT0078930003
Tumor
0.5
CPT0012900004
Tumor
0.5
CPT0000890001
Normal
0.5
CPT0089460004
Tumor
0.5
CPT0078940001
Normal
0.5
CPT0000640003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0001220008
Tumor
0.5
CPT0000780007
Tumor
0.5
CPT0065690003
Tumor
0.4
CPT0079300001
Normal
0.4
CPT0076330003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0088900003
Tumor
0.4
CPT0006950001
Normal
0.4
CPT0019990003
Tumor
0.4
CPT0006900003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0079510001
Normal
0.3
CPT0078840001
Normal
0.3
CPT0001190001
Normal
0.3
CPT0081620001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0007860003
Tumor
0.3
CPT0024680001
Normal
0.3
CPT0079480003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0000660001
Normal
0.3
CPT0025610001
Normal
0.3
CPT0088480003
Tumor
0.3
CPT0089020003
Tumor
0.2
CPT0078530001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0079180003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0066470004
Tumor
0.2
CPT0076350001
Normal
0.2
CPT0012920003
Normal
0.2
CPT0077140001
Normal
0.2
CPT0012080003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0088640003
Normal
0.2
CPT0014160003
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0077490003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0081990003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0078830003
Tumor
0.1
CPT0012570003
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0009080003
Normal
0.1
CPT0088780001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0063330001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0012090003
Normal
0.1
CPT0066520001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0009060003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0025050003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0089040001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0078660003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0078670001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0017850003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0026410003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0001340003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0077320001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0078990003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0086820003
Tumor
-0.2
CPT0006730001
Normal
-0.2
CPT0001180009
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0012670003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0012290003
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0025880003
Tumor
-0.2
CPT0025920001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0086950003
Tumor
-0.3
CPT0025060001
Normal
-0.3
CPT0065450001
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0088760003
Tumor
-0.3
CPT0079430001
Normal
-0.3
CPT0088550004
Tumor
-0.4
CPT0081880003
Tumor
-0.4
CPT0069160003
Tumor
-0.4
CPT0000790001
Normal
-0.4
CPT0015730003
Tumor
-0.4
CPT0084560003
Tumor
-0.4
CPT0079410003
Tumor
-0.4
CPT0084590001
Normal
-0.5
CPT0025290003
Tumor
-0.5
CPT0012180003
Tumor
-0.5
CPT0069190001
Normal
-0.5
CPT0023350003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0092740003
Normal
-0.6
CPT0078800003
Tumor
-0.8
CPT0065820001
Normal
N/A
CPT0092790003
Tumor
N/A
CPT0001510001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0092800003
Normal
N/A
CPT0065810003
Tumor
N/A
CPT0086370003
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
