HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:52.0 nTPM
HPA Brain:37.7 nTPM
GTEx:52.0 nTPM
FANTOM5:26.2 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:21.0 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035262Antibody CAB025497
Glial cells MediumLow
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 37.7
Sample id Sample description nTPM
Hippocampus
nTPM: 34.9
2148 Female, age 91, left hemisphere 39.6
1898 Male, age 80, left hemisphere 38.5
2529 Female, age 94, left hemisphere 33.9
2621 Female, age 67, right hemisphere 33.2
1855 Male, age 76, left hemisphere 32.5
1911 Female, age 85, right hemisphere 31.9
Dentate gyrus
nTPM: 37.7
2531 Female, age 67, both hemispheres 43.1
2530 Female, age 94, left hemisphere 42.8
1927 Female, age 91, both hemispheres 40.1
2528 Male, age 74, both hemispheres 37.0
2010 Male, age 76, both hemispheres 34.0
2246 Female, age 85, both hemispheres 29.2
Entorhinal gyrus
nTPM: 37.1
2613 Female, age 94, left hemisphere 45.1
2764 Male, age 80, right hemisphere 43.0
1938 Female, age 85, left hemisphere 36.6
1787 Male, age 76, left hemisphere 34.8
2686 Male, age 75, right hemisphere 32.3
2117 Female, age 91, right hemisphere 30.5
Hippocampus, CA1
nTPM: 37.1
2749 Male, age 80, left hemisphere 51.2
2527 Male, age 74, both hemispheres 35.1
2045 Male, age 76, both hemispheres 34.2
1873 Female, age 85, both hemispheres 33.3
2082 Female, age 91, right hemisphere 31.9
Hippocampus, CA2
nTPM: 34.8
1963 Male, age 80, left hemisphere 53.8
1892 Male, age 76, both hemispheres 36.8
2437 Female, age 94, left hemisphere 31.8
2113 Female, age 91, right hemisphere 30.3
1940 Female, age 85, left hemisphere 28.4
2249 Male, age 74, both hemispheres 27.4
Hippocampus, CA3
nTPM: 36.9
2620 Female, age 94, left hemisphere 47.9
2137 Male, age 80, left hemisphere 41.2
2861 Female, age 67, both hemispheres 40.4
1867 Male, age 76, both hemispheres 33.1
2436 Male, age 74, both hemispheres 30.4
1891 Female, age 85, both hemispheres 28.5
Parahippocampal cortex
nTPM: 31.5
2532 Female, age 72, left hemisphere 34.5
2622 Female, age 67, right hemisphere 33.4
1933 Female, age 85, both hemispheres 33.2
1990 Female, age 91, right hemisphere 32.7
2245 Female, age 91, both hemispheres 32.5
1850 Male, age 80, both hemispheres 31.5
2693 Female, age 94, both hemispheres 29.7
2018 Male, age 76, both hemispheres 29.5
2692 Male, age 74, both hemispheres 29.2
2250 Female, age 67, right hemisphere 29.1
Perirhinal gyrus
nTPM: 34.2
1794 Male, age 80, right hemisphere 38.6
1847 Female, age 91, left hemisphere 36.6
1841 Female, age 85, right hemisphere 33.9
2521 Female, age 94, right hemisphere 33.2
2848 Male, age 76, right hemisphere 28.9
Subiculum
nTPM: 29.5
1977 Female, age 85, both hemispheres 32.8
2729 Female, age 91, right hemisphere 31.7
1901 Male, age 80, both hemispheres 31.5
2619 Male, age 74, both hemispheres 29.3
2042 Male, age 76, both hemispheres 26.8
2438 Female, age 94, left hemisphere 24.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 52.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.0
Samples: 197

Max nTPM: 114.0
Min nTPM: 15.8
Std nTPM: 17.3
Median nTPM: 50.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 114.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 101.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 100.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 89.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 88.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 85.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 85.8
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 82.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 80.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 80.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 80.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.2
FF:10153-102I9 76 years, female 28.6
FF:10169-103B7 60 years, female 23.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 21.9
Pig sample Sample description nTPM
Subiculum
nTPM: 16.9
Samples: 4

Max nTPM: 18.4
Min nTPM: 14.6
Sample A Female 18.4
Sample B Female 17.4
Sample C Male 17.3
Sample D Male 14.6
Dorsal hippocampus
nTPM: 21.9
Samples: 4

Max nTPM: 25.5
Min nTPM: 17.6
Sample A Female 25.5
Sample B Female 22.9
Sample C Male 21.5
Sample D Male 17.6
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 17.8
Min nTPM: 16.2
Sample A Female 17.3
Sample B Female 17.8
Sample C Male 16.2
Sample D Male 16.5
Ventral hippocampus
nTPM: 20.9
Samples: 4

Max nTPM: 24.0
Min nTPM: 17.1
Sample A Female 20.9
Sample B Female 17.1
Sample C Male 24.0
Sample D Male 21.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 21.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 20.1
Min nTPM: 18.5
Sample A Male 18.9
Sample B Male 20.1
Sample C Female 20.1
Sample D Female 18.5
Hippocampal formation
nTPM: 21.0
Samples: 4

Max nTPM: 23.3
Min nTPM: 17.6
Sample A Male 17.6
Sample B Male 20.0
Sample C Female 23.3
Sample D Female 23.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68638023 Antisense, RP_050126_02_A12, Mouse strain C57BL/6J (56 days, male) 1.6

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