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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:50.1 nTPM
HPA Brain:34.6 nTPM
GTEx:50.1 nTPM
FANTOM5:35.2 Scaled Tags Per Million
Pig:21.2 nTPM
Mouse:20.3 nTPM
Allen mouse:0.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA035262Antibody CAB025497
Glial cells MediumLow
Neuronal cells Not detectedHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

34.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 29.1
2289 Male, age 61, right hemisphere 33.2
1781 Male, age 74, unknown 32.2
2290 Female, age 72, unknown 31.9
1854 Male, age 80, left hemisphere 29.2
1857 Female, age 85, left hemisphere 28.7
2288 Male, age 75, left hemisphere 27.9
2846 Female, age 79, unknown 27.8
2481 Female, age 94, left hemisphere 22.3
Globus pallidus, externus
nTPM: 25.0
2646 Male, age 61, right hemisphere 28.2
2772 Female, age 79, unknown 26.5
1996 Male, age 80, right hemisphere 23.7
2567 Female, age 72, unknown 23.5
2395 Male, age 75, both hemispheres 22.9
Globus pallidus, internus
nTPM: 24.0
2111 Female, age 85, right hemisphere 28.5
2483 Female, age 94, right hemisphere 26.4
2778 Female, age 91, both hemispheres 25.1
2566 Female, age 72, unknown 24.9
2287 Male, age 75, right hemisphere 22.7
1818 Male, age 74, unknown 22.2
2037 Male, age 80, right hemisphere 18.0
Nucleus accumbens
nTPM: 30.1
1783 Male, age 74, unknown 38.4
2824 Male, age 61, right hemisphere 34.1
1806 Female, age 85, left hemisphere 33.2
1856 Female, age 91, right hemisphere 30.9
2286 Male, age 75, left hemisphere 28.8
2732 Male, age 80, right hemisphere 27.8
2698 Female, age 72, unknown 23.8
2391 Female, age 94, left hemisphere 23.7
Nucleus basalis of Meynert
nTPM: 29.0
2484 Female, age 94, left hemisphere 34.2
2569 Male, age 61, both hemispheres 30.6
2393 Male, age 80, right hemisphere 27.1
2821 Male, age 75, both hemispheres 23.9
Nucleus of the diagonal band
nTPM: 31.5
2029 Male, age 61, right hemisphere 36.6
2775 Male, age 80, right hemisphere 33.7
2195 Female, age 85, both hemispheres 32.1
1812 Female, age 91, both hemispheres 28.4
1979 Male, age 74, unknown 26.8
Putamen
nTPM: 31.2
2466 Female, age 79, unknown 34.4
2489 Female, age 72, unknown 33.3
1838 Male, age 80, right hemisphere 32.4
2647 Male, age 75, left hemisphere 31.2
1829 Male, age 74, unknown 29.7
1937 Female, age 91, right hemisphere 28.8
2482 Female, age 94, left hemisphere 28.7
Septal nuclei
nTPM: 31.6
1960 Male, age 74, unknown 43.0
2031 Female, age 72, unknown 37.6
2059 Female, age 85, both hemispheres 33.0
2009 Female, age 91, both hemispheres 30.7
2394 Male, age 61, left hemisphere 27.0
2629 Female, age 94, right hemisphere 25.2
2199 Male, age 80, right hemisphere 25.1
Stria terminalis, bed nucleus
nTPM: 34.6
2486 Female, age 94, both hemispheres 40.9
1974 Female, age 91, both hemispheres 36.7
2201 Male, age 74, unknown 26.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 44.3
Samples: 246

Max nTPM: 76.8
Min nTPM: 17.4
Std nTPM: 10.6
Median nTPM: 43.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 76.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 75.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 74.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 72.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 71.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 70.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 70.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 68.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 66.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 65.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 64.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 64.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 64.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 64.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 62.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 62.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 61.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 61.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 61.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 60.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 60.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 59.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 59.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 59.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 58.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 57.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 57.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 56.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 56.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 56.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 55.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 55.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 55.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 55.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 55.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 55.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 54.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 53.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 53.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 53.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 52.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 52.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 52.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 52.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 52.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 52.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 52.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 52.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 52.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 52.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 51.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 51.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 51.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 51.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 51.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 50.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 50.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 50.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 50.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 50.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 50.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 50.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 50.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 50.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 49.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 49.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 49.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 49.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 49.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 49.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 49.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 49.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 49.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 48.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 48.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 48.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 48.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 48.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 48.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 48.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 48.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 48.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 47.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 47.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 47.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 47.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 47.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 47.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 47.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 47.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 47.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 47.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 46.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 46.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 46.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 46.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 46.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 46.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 46.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 46.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 46.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 45.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 45.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 45.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 45.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 45.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 45.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 45.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 45.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 45.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 45.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 45.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 45.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 45.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 44.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 44.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 44.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 44.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 43.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 43.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 43.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 43.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 43.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 43.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 43.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 43.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 42.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 42.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 42.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 42.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 42.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 42.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 42.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 42.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 42.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 42.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 41.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 41.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 41.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 41.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 41.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 41.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 41.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 41.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 41.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 41.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 41.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 40.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 40.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 40.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 40.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 40.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 40.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 40.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 40.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 40.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 40.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 40.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 39.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 39.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 39.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 39.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 39.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 39.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 39.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 39.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 39.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 39.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 39.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 38.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 38.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 38.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 38.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 38.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 38.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 38.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 37.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 37.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 37.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 37.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 37.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 37.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 37.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 37.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 37.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 37.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 37.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 37.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 37.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 36.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 36.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 36.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 36.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 36.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 36.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 36.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 36.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 35.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 35.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 35.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 35.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 35.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 35.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 35.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 35.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 35.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 34.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 34.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 33.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 33.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 33.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 33.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 33.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 33.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 32.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 32.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 32.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 32.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 32.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 32.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 31.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 30.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 30.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 30.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 29.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 29.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 29.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 29.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 29.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 29.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 29.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 28.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 28.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 27.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 27.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 27.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 26.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 26.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 26.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 26.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 25.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 24.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 23.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 21.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 21.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 17.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 50.1
Samples: 246

Max nTPM: 107.3
Min nTPM: 18.4
Std nTPM: 14.7
Median nTPM: 47.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 107.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 102.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 97.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 90.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 89.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 89.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 88.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 85.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 80.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 79.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 78.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 78.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 78.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 76.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 76.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 75.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 73.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 72.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 72.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 70.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 70.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 70.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 69.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 69.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 68.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 68.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 68.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 68.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 68.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 67.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 67.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 67.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 65.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 65.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 65.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 64.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 64.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 64.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 64.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 64.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 63.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 63.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 63.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 63.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 62.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 62.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 62.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 61.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 61.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 61.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 61.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 60.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 59.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 59.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 59.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 59.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 58.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 58.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 58.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 58.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 58.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 58.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 57.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 57.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 57.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 57.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 57.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 57.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 57.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 57.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 56.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 55.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 55.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 55.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 55.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 55.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 55.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 55.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 54.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 54.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 54.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 54.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 53.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 53.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 53.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 53.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 53.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 53.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 53.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 53.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 52.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 52.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 52.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 52.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 52.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 52.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 51.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 51.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 51.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 50.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 50.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 50.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 50.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 50.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 50.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 50.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 50.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 49.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 49.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 49.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 49.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 49.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 49.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 48.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 48.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 48.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 48.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 48.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 48.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 48.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 48.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 47.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 47.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 47.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 46.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 46.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 46.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 46.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 46.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 46.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 46.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 46.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 46.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 46.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 45.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 45.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 45.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 45.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 45.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 45.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 45.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 45.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 44.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 44.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 44.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 44.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 44.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 44.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 44.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 44.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 44.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 44.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 44.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 44.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 43.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 43.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 43.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 43.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 43.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 43.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 43.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 43.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 43.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 43.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 42.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 42.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 42.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 42.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 42.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 42.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 42.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 42.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 42.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 41.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 41.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 41.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 41.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 41.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 41.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 41.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 41.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 41.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 40.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 40.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 40.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 40.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 39.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 39.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 39.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 39.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 39.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 39.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 39.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 39.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 38.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 38.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 38.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 38.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 38.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 38.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 38.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 37.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 37.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 37.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 37.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 37.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 37.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 36.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 36.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 36.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 36.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 36.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 36.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 36.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 36.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 35.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 35.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 35.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 35.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 34.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 34.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 34.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 33.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 33.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 33.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 33.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 33.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 33.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 32.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 32.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 32.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 30.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 29.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 29.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 29.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 28.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 28.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 27.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 27.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 26.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 25.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 23.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 21.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 19.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 19.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 18.4
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Brain - Putamen (basal ganglia)
Average nTPM: 50.1
Samples: 205

Max nTPM: 114.2
Min nTPM: 22.0
Std nTPM: 12.8
Median nTPM: 48.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 114.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 94.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 87.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 77.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 77.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 77.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 76.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 75.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 72.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 72.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 70.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 69.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 69.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 67.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 67.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 67.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 67.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 66.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 66.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 66.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 66.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 65.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 65.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 65.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 65.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 65.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 64.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 64.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 64.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 63.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 62.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 62.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 62.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 62.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 61.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 61.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 61.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 61.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 61.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 60.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 60.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 60.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 59.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 59.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 59.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 58.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 58.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 58.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 58.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 58.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 58.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 57.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 57.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 57.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 57.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 57.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 56.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 56.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 56.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 56.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 56.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 55.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 55.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 55.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 55.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 54.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 54.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 54.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 54.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 54.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 54.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 54.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 54.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 54.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 53.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 53.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 53.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 53.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 53.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 52.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 52.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 52.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 52.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 51.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 51.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 51.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 51.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 51.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 51.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 51.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 50.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 50.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 50.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 50.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 49.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 49.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 49.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 49.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 49.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 49.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 48.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 48.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 48.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 47.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 47.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 47.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 47.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 47.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 46.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 46.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 46.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 46.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 46.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 46.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 46.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 46.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 45.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 45.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 45.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 45.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 45.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 45.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 45.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 45.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 44.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 44.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 44.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 44.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 44.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 44.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 44.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 44.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 44.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 43.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 43.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 43.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 43.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 43.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 43.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 43.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 43.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 43.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 43.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 43.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 42.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 42.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 42.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 42.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 42.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 42.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 42.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 42.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 42.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 42.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 41.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 41.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 41.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 40.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 40.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 40.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 39.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 39.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 39.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 38.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 38.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 38.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 38.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 38.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 37.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 37.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 37.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 37.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 37.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 37.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 37.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 36.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 36.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 36.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 36.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 36.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 36.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 35.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 35.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 35.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 35.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 34.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 34.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 34.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 34.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 33.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 33.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 33.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 33.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 33.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 33.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 32.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 32.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 32.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 31.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 30.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 29.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 28.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 28.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 25.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 22.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

35.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 35.2
FF:10164-103B2 76 years, female 35.2
Nucleus accumbens
Scaled Tags Per Million: 34.5
FF:10037-101F1 23-56 years, mixed 34.5
Putamen
Scaled Tags Per Million: 30.6
FF:10176-103C5 60 years, female 30.6
Globus pallidus
Scaled Tags Per Million: 18.0
FF:10161-103A8 76 years, female 21.8
FF:10175-103C4 60 years, female 14.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.2
Pig sample Sample description nTPM
Caudate
nTPM: 18.2
Samples: 4

Max nTPM: 19.7
Min nTPM: 15.9
Sample A Female 15.9
Sample B Female 19.7
Sample C Male 19.7
Sample D Male 17.3
Putamen
nTPM: 21.2
Samples: 4

Max nTPM: 25.0
Min nTPM: 16.9
Sample A Female 25.0
Sample B Female 16.9
Sample C Male 20.7
Sample D Male 22.1
Septum
nTPM: 19.1
Samples: 4

Max nTPM: 20.1
Min nTPM: 17.9
Sample A Female 20.1
Sample B Female 19.0
Sample C Male 17.9
Sample D Male 19.3
Ventral pallidum
nTPM: 20.5
Samples: 4

Max nTPM: 22.0
Min nTPM: 17.0
Sample A Female 17.0
Sample B Female 22.0
Sample C Male 21.7
Sample D Male 21.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 18.3
Samples: 4

Max nTPM: 20.7
Min nTPM: 14.8
Sample A Male 19.6
Sample B Male 20.7
Sample C Female 14.8
Sample D Female 17.9
Septum
nTPM: 20.0
Samples: 4

Max nTPM: 21.2
Min nTPM: 17.9
Sample A Male 21.2
Sample B Male 17.9
Sample C Female 20.6
Sample D Female 20.4
Ventral forebrain
nTPM: 20.3
Samples: 4

Max nTPM: 21.5
Min nTPM: 19.0
Sample A Male 21.5
Sample B Male 19.0
Sample C Female 21.0
Sample D Female 19.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.5
68638023 Antisense, RP_050126_02_A12, Mouse strain C57BL/6J (56 days, male) 0.5
Pallidum
Expression energy: 0.4
68638023 Antisense, RP_050126_02_A12, Mouse strain C57BL/6J (56 days, male) 0.4

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