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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYNPO is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
122.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
96.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
80.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
58.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
50.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
43.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
41.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
41.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
40.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
39.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
38.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
38.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
37.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
36.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
33.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
33.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
28.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
28.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
28.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
26.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
24.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
24.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
24.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
24.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
22.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
22.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
22.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
21.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
20.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
19.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
18.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
18.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
18.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
17.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
16.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
15.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
14.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
14.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
14.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
14.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
13.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
13.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
12.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
12.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
12.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
11.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
5.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYNPO is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
106.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
481.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
427.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
340.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
328.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
301.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
294.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
277.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
277.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
276.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
274.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
266.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
263.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
259.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
255.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
252.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
252.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
250.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
248.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
247.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
247.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
247.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
246.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
245.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
245.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
241.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
239.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
235.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
235.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
234.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
234.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
232.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
229.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
227.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
226.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
226.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
220.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
219.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
219.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
218.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
217.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
212.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
209.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
209.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
208.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
207.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
203.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
203.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
202.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
201.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
201.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
200.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
199.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
198.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
196.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
195.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
195.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
195.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
195.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
194.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
189.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
187.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
186.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
185.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
185.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
184.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
182.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
181.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
181.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
180.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
180.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
178.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
175.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
175.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
174.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
171.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
171.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
171.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
171.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
170.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
169.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
168.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
168.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
167.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
167.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
167.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
166.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
165.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
165.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
165.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
164.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
162.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
161.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
161.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
161.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
159.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
159.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
159.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
159.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
157.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
157.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
156.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
155.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
155.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
155.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
155.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
154.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
154.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
153.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
153.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
153.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
152.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
152.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
151.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
151.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
149.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
149.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
148.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
146.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
146.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
146.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
146.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
146.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
145.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
144.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
144.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
143.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
143.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
142.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
142.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
141.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
141.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
141.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
141.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
140.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
140.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
140.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
140.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
139.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
139.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
139.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
139.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
137.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
137.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
136.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
136.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
136.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
136.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
135.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
135.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
134.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
134.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
134.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
133.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
133.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
132.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
132.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
132.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
131.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
131.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
131.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
131.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
131.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
130.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
130.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
129.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
129.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
128.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
128.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
128.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
128.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
128.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
128.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
127.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
127.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
127.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
127.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
127.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
126.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
124.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
124.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
123.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
122.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
122.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
120.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
120.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
120.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
119.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
119.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
118.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
117.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
117.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
116.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
116.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
116.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
115.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
115.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
115.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
114.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
114.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
114.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
114.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
113.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
113.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
112.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
112.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
112.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
112.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
112.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
111.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
111.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
111.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
111.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
110.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
110.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
110.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
110.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
110.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
109.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
109.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
109.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
109.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
109.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
109.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
108.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
108.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
108.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
108.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
106.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
106.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
106.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
105.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
105.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
105.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
104.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
104.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
104.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
104.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
103.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
103.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
103.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
102.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
102.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
102.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
101.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
101.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
101.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
100.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
99.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
99.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
99.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
99.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
99.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
98.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
98.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
98.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
98.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
98.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
97.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
97.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
96.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
96.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
96.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
94.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
94.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
94.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
93.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
93.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
93.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
93.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
93.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
93.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
93.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
93.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
92.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
92.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
92.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
91.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
91.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
91.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
91.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
91.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
91.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
90.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
90.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
90.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
89.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
89.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
89.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
88.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
88.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
87.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
87.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
86.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
86.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
86.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
86.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
85.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
85.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
85.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
85.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
85.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
84.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
84.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
84.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
83.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
83.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
83.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
83.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
83.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
83.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
81.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
81.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
81.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
80.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
79.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
79.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
79.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
79.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
79.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
78.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
78.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
78.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
78.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
78.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
78.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
78.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
78.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
77.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
77.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
77.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
77.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
77.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
76.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
75.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
74.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
74.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
74.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
74.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
73.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
73.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
73.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
72.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
72.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
72.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
71.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
71.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
70.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
70.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
69.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
69.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
69.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
68.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
68.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
68.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
68.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
67.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
67.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
67.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
66.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
65.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
65.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
64.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
64.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
64.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
63.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
63.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
63.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
62.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
61.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
61.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
60.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
59.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
59.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
58.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
58.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
58.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
58.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
58.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
58.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
58.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
58.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
57.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
57.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
57.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
57.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
57.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
56.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
56.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
56.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
55.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
55.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
55.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
55.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
55.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
55.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
55.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
54.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
53.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
53.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
53.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
53.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
52.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
51.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
51.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
51.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
50.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
50.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
50.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
50.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
49.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
49.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
49.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
49.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
48.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
48.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
48.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
48.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
47.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
47.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
45.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
45.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
45.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
45.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
44.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
44.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
44.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
44.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
44.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
44.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
44.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
43.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
43.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
43.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
42.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
42.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
42.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
41.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
41.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
41.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
40.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
40.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
39.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
39.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
38.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
38.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
38.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
37.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
37.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
37.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
37.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
36.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
36.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
35.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
35.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
34.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
34.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
33.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
33.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
32.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
32.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
31.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
31.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
30.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
30.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
29.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
29.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
29.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
29.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
28.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
28.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
27.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
27.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
26.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
26.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
25.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
24.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
24.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
23.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
23.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
22.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
22.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
22.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
22.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
22.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
22.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
22.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
21.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
20.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
18.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
18.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
18.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
17.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
17.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
17.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
15.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
14.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
12.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
12.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
12.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
8.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
6.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
4.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYNPO is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
114.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
626.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
474.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
392.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
371.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
267.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
249.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
241.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
240.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
235.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
213.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
209.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
207.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
192.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
175.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
172.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
171.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
170.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
167.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
163.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
159.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
153.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
146.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
141.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
139.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
136.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
134.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
132.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
131.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
127.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
123.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
123.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
122.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
122.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
121.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
120.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
117.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
110.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
108.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
108.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
107.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
105.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
102.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
102.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
101.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
101.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
99.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
98.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
98.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
97.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
97.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
97.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
97.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
94.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
93.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
91.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
90.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
85.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
81.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
80.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
77.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
76.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
75.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
75.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
71.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
68.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
68.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
67.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
65.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
62.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
62.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
61.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
60.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
60.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
59.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
58.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
56.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
55.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
53.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
52.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
52.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
50.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
49.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
48.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
46.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
45.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
44.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
41.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
36.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
33.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
31.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
30.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
28.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
28.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
27.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
26.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
26.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SYNPO is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
168.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
163.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
127.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
125.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
87.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
82.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
76.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
74.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
71.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
69.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
69.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
68.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
63.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
59.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
57.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
56.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
55.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
54.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
53.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
53.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
52.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
52.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
51.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
48.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
47.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
46.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
46.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
46.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
45.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
45.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
45.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
42.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
41.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
41.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
41.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
40.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
39.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
39.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
39.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
35.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
34.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
33.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
33.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
32.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
32.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
31.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
31.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
30.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
30.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
29.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
29.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
29.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
29.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
28.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
28.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
28.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
27.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
27.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
27.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
26.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
26.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
25.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
25.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
25.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
25.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
25.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
24.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
24.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
24.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
23.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
23.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
23.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
22.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
22.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
21.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
21.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
21.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
21.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
20.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
20.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
20.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
18.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
17.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
17.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
16.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
16.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
16.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
16.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
15.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
15.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
15.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
15.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
15.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
15.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
14.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
14.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
13.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
13.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
13.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
12.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
12.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
12.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
12.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
12.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
12.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
12.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
11.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
11.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
11.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
11.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
11.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
11.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
11.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
11.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
11.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
10.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
10.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
10.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
10.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
9.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
9.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
9.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
9.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
9.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
9.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
9.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
9.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
8.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
8.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
8.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
8.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
8.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
7.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
7.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
7.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
7.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
7.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
7.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
7.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
7.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
7.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
6.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
6.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
6.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
6.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
6.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
6.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
6.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
6.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
6.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
6.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
6.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
5.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
5.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
5.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
5.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
5.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
5.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
5.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
5.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
5.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
4.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
4.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
4.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
4.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
4.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
4.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
4.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
4.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
4.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
4.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
4.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
4.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
4.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
4.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
4.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
4.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
4.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
3.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
3.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
3.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
3.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
3.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
3.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
3.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
3.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
3.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
3.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
2.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
2.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
2.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
2.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
2.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
2.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
2.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
2.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
2.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
2.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
2.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
2.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
2.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
2.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
1.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
1.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
1.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
1.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.0
CPT0000640003
Tumor
0.9
CPT0069000003
Tumor
0.7
CPT0077320001
Normal
0.6
CPT0065450001
Normal
0.6
CPT0021240003
Tumor
0.6
CPT0088690003
Tumor
0.6
CPT0012080003
Tumor
0.6
CPT0011240003
Tumor
0.6
CPT0009000003
Tumor
0.6
CPT0088630003
Tumor
0.6
CPT0000660001
Normal
0.5
CPT0025580004
Tumor
0.5
CPT0088760003
Tumor
0.5
CPT0010170001
Normal
0.5
CPT0012670003
Tumor
0.5
CPT0001220008
Tumor
0.4
CPT0066430001
Normal
0.4
CPT0066480003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0086370003
Normal
0.4
CPT0079270003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0065690003
Tumor
0.4
CPT0088710001
Normal
0.4
CPT0088900003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0006950001
Normal
0.4
CPT0006530001
Normal
0.4
CPT0092740003
Normal
0.3
CPT0014130001
Normal
0.3
CPT0075560003
Tumor
0.3
CPT0012090003
Normal
0.3
CPT0025610001
Normal
0.3
CPT0001270001
Normal
0.3
CPT0077140001
Normal
0.3
CPT0066470004
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0006730001
Normal
0.3
CPT0025170003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0023360001
Normal
0.3
CPT0086890003
Normal
0.3
CPT0017410003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0025060001
Normal
0.3
CPT0086870003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0078670001
Normal
0.3
CPT0088570001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0088920001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0025290003
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0025230003
Tumor
0.2
CPT0089480003
Normal
0.2
CPT0076350001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0075720003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0007470001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0012550003
Tumor
0.2
CPT0087050003
Normal
0.2
CPT0085670003
Tumor
0.2
CPT0020020001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0087040003
Tumor
0.2
CPT0020130001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0010120001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0092290003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0024680001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0015910003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0012370003
Tumor
0.1
CPT0081600003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0077500001
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0000780007
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0092800003
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0079480003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0009020003
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0026410003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0065870003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0012900004
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0079380003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0012920003
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0086950003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0001180009
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0092730003
Tumor
-0.3
CPT0079510001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0081990003
Tumor
-0.3
CPT0069190001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0012280003
Tumor
-0.3
CPT0063330001
Normal
-0.3
CPT0020120003
Tumor
-0.3
CPT0023350003
Tumor
-0.4
CPT0064370003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0063320003
Tumor
-0.4
CPT0009060003
Tumor
-0.4
CPT0081880003
Tumor
-0.4
CPT0079410003
Tumor
-0.5
CPT0065750003
Tumor
-0.5
CPT0010110003
Tumor
-0.5
CPT0025110003
Tumor
-0.5
CPT0077310003
Tumor
-0.5
CPT0065810003
Tumor
-0.5
CPT0025050003
Tumor
-0.5
CPT0015810003
Tumor
-0.5
CPT0065430003
Tumor
-0.6
CPT0079230003
Tumor
-0.6
CPT0001230001
Normal
-0.6
CPT0011410003
Tumor
-0.6
CPT0078830003
Tumor
-0.6
CPT0007320003
Tumor
-0.6
CPT0088480003
Tumor
-0.6
CPT0079300001
Normal
-0.6
CPT0078990003
Tumor
-0.7
CPT0000870016
Tumor
-0.8
CPT0014370004
Tumor
-0.8
CPT0012640003
Normal
-0.8
CPT0088970003
Tumor
-0.8
CPT0002270011
Tumor
-0.9
CPT0001500009
Tumor
-0.9
CPT0086360003
Tumor
-0.9
CPT0012180003
Tumor
-1.0
CPT0001540009
Tumor
-1.0
CPT0015730003
Tumor
-1.3
CPT0078660003
Tumor
-1.3
CPT0088550004
Tumor
-1.4
CPT0079180003
Tumor
-1.4
CPT0078800003
Tumor
-2.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
