HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:9.9 nTPM
HPA Brain:10.3 nTPM
GTEx:9.9 nTPM
FANTOM5:8.6 Scaled Tags Per Million
Pig:22.3 nTPM
Mouse:66.5 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052052Antibody CAB005583Antibody CAB072336
Glial cells MediumMediumHigh
Neuronal cells HighMediumHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 10.3
Sample id Sample description nTPM
Hippocampus
nTPM: 6.8
1898 Male, age 80, left hemisphere 8.5
2621 Female, age 67, right hemisphere 7.3
1911 Female, age 85, right hemisphere 6.9
2148 Female, age 91, left hemisphere 6.2
1855 Male, age 76, left hemisphere 6.1
2529 Female, age 94, left hemisphere 5.8
Dentate gyrus
nTPM: 7.7
2530 Female, age 94, left hemisphere 11.1
2010 Male, age 76, both hemispheres 7.8
2246 Female, age 85, both hemispheres 7.7
2528 Male, age 74, both hemispheres 7.4
1927 Female, age 91, both hemispheres 6.2
2531 Female, age 67, both hemispheres 6.2
Entorhinal gyrus
nTPM: 8.0
2764 Male, age 80, right hemisphere 11.1
1938 Female, age 85, left hemisphere 8.2
2613 Female, age 94, left hemisphere 8.0
1787 Male, age 76, left hemisphere 7.9
2686 Male, age 75, right hemisphere 6.5
2117 Female, age 91, right hemisphere 6.2
Hippocampus, CA1
nTPM: 8.5
2749 Male, age 80, left hemisphere 9.2
2045 Male, age 76, both hemispheres 8.6
2527 Male, age 74, both hemispheres 8.6
2082 Female, age 91, right hemisphere 8.1
1873 Female, age 85, both hemispheres 7.8
Hippocampus, CA2
nTPM: 7.3
1892 Male, age 76, both hemispheres 9.2
2249 Male, age 74, both hemispheres 8.9
1963 Male, age 80, left hemisphere 7.7
1940 Female, age 85, left hemisphere 6.9
2437 Female, age 94, left hemisphere 6.7
2113 Female, age 91, right hemisphere 4.5
Hippocampus, CA3
nTPM: 7.4
2436 Male, age 74, both hemispheres 9.0
1867 Male, age 76, both hemispheres 8.5
2861 Female, age 67, both hemispheres 7.3
1891 Female, age 85, both hemispheres 6.6
2137 Male, age 80, left hemisphere 6.5
2620 Female, age 94, left hemisphere 6.5
Parahippocampal cortex
nTPM: 7.4
1850 Male, age 80, both hemispheres 11.6
2250 Female, age 67, right hemisphere 9.3
2245 Female, age 91, both hemispheres 8.7
1933 Female, age 85, both hemispheres 7.6
2532 Female, age 72, left hemisphere 7.2
2692 Male, age 74, both hemispheres 6.7
1990 Female, age 91, right hemisphere 6.5
2018 Male, age 76, both hemispheres 6.2
2693 Female, age 94, both hemispheres 5.3
2622 Female, age 67, right hemisphere 5.2
Perirhinal gyrus
nTPM: 10.3
1794 Male, age 80, right hemisphere 12.5
1847 Female, age 91, left hemisphere 10.5
1841 Female, age 85, right hemisphere 9.6
2521 Female, age 94, right hemisphere 9.5
2848 Male, age 76, right hemisphere 9.3
Subiculum
nTPM: 7.6
2438 Female, age 94, left hemisphere 13.7
1901 Male, age 80, both hemispheres 7.7
1977 Female, age 85, both hemispheres 7.0
2729 Female, age 91, right hemisphere 6.7
2042 Male, age 76, both hemispheres 5.3
2619 Male, age 74, both hemispheres 5.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 9.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.9
Samples: 197

Max nTPM: 18.2
Min nTPM: 0.0
Std nTPM: 2.9
Median nTPM: 9.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 18.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 17.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 16.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 16.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 15.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 15.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 15.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 15.7
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 15.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 15.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 14.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 8.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.6
FF:10153-102I9 76 years, female 12.0
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.3
Pig sample Sample description nTPM
Subiculum
nTPM: 21.1
Samples: 4

Max nTPM: 25.6
Min nTPM: 18.9
Sample A Female 25.6
Sample B Female 20.6
Sample C Male 18.9
Sample D Male 19.4
Dorsal hippocampus
nTPM: 22.3
Samples: 4

Max nTPM: 25.4
Min nTPM: 19.9
Sample A Female 25.4
Sample B Female 23.7
Sample C Male 20.3
Sample D Male 19.9
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 23.1
Min nTPM: 18.9
Sample A Female 23.1
Sample B Female 22.6
Sample C Male 20.6
Sample D Male 18.9
Ventral hippocampus
nTPM: 21.7
Samples: 4

Max nTPM: 26.3
Min nTPM: 17.5
Sample A Female 19.6
Sample B Female 17.5
Sample C Male 26.3
Sample D Male 23.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 66.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.6
Samples: 4

Max nTPM: 64.6
Min nTPM: 61.0
Sample A Male 61.0
Sample B Male 61.0
Sample C Female 64.6
Sample D Female 63.9
Hippocampal formation
nTPM: 66.5
Samples: 4

Max nTPM: 73.8
Min nTPM: 60.4
Sample A Male 73.8
Sample B Male 67.6
Sample C Female 60.4
Sample D Female 64.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
71232781 Antisense, RP_050503_01_G08, Mouse strain C57BL/6J (56 days, male) 7.9

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